RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 RPL37AP61513 92 aaKnown RBP14.03□□□□□ -0.16
RCCD1-202ENST00000554302 EIF5AL1Q6IS14 154 aaKnown RBP14.03□□□□□ -0.16
RCCD1-202ENST00000554302 XKRY2A2RUG3 117 aa14.02□□□□□ -0.17
RCCD1-202ENST00000554302 CNBPP62633 177 aaKnown RBP14.02□□□□□ -0.17
RCCD1-202ENST00000554302 SERTAD4-AS1Q5TG53 156 aa14.02□□□□□ -0.17
RCCD1-202ENST00000554302 LYZL1Q6UWQ5 148 aa14.02□□□□□ -0.17
RCCD1-202ENST00000554302 C9orf62Q8N4C0 152 aa14.02□□□□□ -0.17
RCCD1-202ENST00000554302 TMEM243Q9BU79 118 aa14.02□□□□□ -0.17
RCCD1-202ENST00000554302 NIT2Q9NQR4 276 aa14.02□□□□□ -0.17
RCCD1-202ENST00000554302 IGLV4-60A0A075B6I1 120 aa14.01□□□□□ -0.17
RCCD1-202ENST00000554302 IGLV10-54A0A075B6I4 117 aa14.01□□□□□ -0.17
RCCD1-202ENST00000554302 TRGC1P0CF51 173 aa14.01□□□□□ -0.17
RCCD1-202ENST00000554302 NTF3P20783 257 aa14.01□□□□□ -0.17
RCCD1-202ENST00000554302 WDR73Q6P4I2 378 aa14.01□□□□□ -0.17
RCCD1-202ENST00000554302 GFRA4Q9GZZ7 299 aa14.01□□□□□ -0.17
RCCD1-202ENST00000554302 DPH3P1Q9H4G8 78 aa14.01□□□□□ -0.17
RCCD1-202ENST00000554302 IFNA1P01562 189 aa14□□□□□ -0.17
RCCD1-202ENST00000554302 CTRLP40313 264 aa14□□□□□ -0.17
RCCD1-202ENST00000554302 HNRNPA3P51991 378 aaKnown RBP14□□□□□ -0.17
RCCD1-202ENST00000554302 CIRBPQ14011 172 aaKnown RBP14□□□□□ -0.17
RCCD1-202ENST00000554302 CNFNQ9BYD5 112 aa14□□□□□ -0.17
RCCD1-202ENST00000554302 BIN3Q9NQY0 253 aa14□□□□□ -0.17
RCCD1-202ENST00000554302 MED9Q9NWA0 146 aa14□□□□□ -0.17
RCCD1-202ENST00000554302 BCL2P10415 239 aa13.98□□□□□ -0.17
RCCD1-202ENST00000554302 NUDT10Q8NFP7 164 aa13.98□□□□□ -0.17
RCCD1-202ENST00000554302 NUDT11Q96G61 164 aa13.98□□□□□ -0.17
RCCD1-202ENST00000554302 SLPIP03973 132 aa13.97□□□□□ -0.17
RCCD1-202ENST00000554302 TMA7Q9Y2S6 64 aaKnown RBP13.97□□□□□ -0.17
RCCD1-202ENST00000554302 hDV102S1A0JD36 115 aa13.96□□□□□ -0.17
RCCD1-202ENST00000554302 H3BS24 57 aa13.94□□□□□ -0.18
RCCD1-202ENST00000554302 COTL1Q14019 142 aa13.94□□□□□ -0.18
RCCD1-202ENST00000554302 TAGLN2P37802 199 aaKnown RBP13.93□□□□□ -0.18
RCCD1-202ENST00000554302 AMTP48728 403 aa13.93□□□□□ -0.18
RCCD1-202ENST00000554302 TWIST1Q15672 202 aa13.93□□□□□ -0.18
RCCD1-202ENST00000554302 TCTE3Q8IZS6 198 aa13.93□□□□□ -0.18
RCCD1-202ENST00000554302 GATD1Q8NB37 220 aa13.93□□□□□ -0.18
RCCD1-202ENST00000554302 IGHV3-64A0A075B6Q5 118 aa13.92□□□□□ -0.18
RCCD1-202ENST00000554302 K7EN84 100 aa13.92□□□□□ -0.18
RCCD1-202ENST00000554302 UBE2L6O14933 153 aa13.92□□□□□ -0.18
RCCD1-202ENST00000554302 SLC51BQ86UW2 128 aa13.92□□□□□ -0.18
RCCD1-202ENST00000554302 RPP21Q9H633 154 aaKnown RBP13.92□□□□□ -0.18
RCCD1-202ENST00000554302 OCC1Q8TAD7 63 aa13.91□□□□□ -0.18
RCCD1-202ENST00000554302 RNF185Q96GF1 192 aa13.91□□□□□ -0.18
RCCD1-202ENST00000554302 RNASE7Q9H1E1 156 aaKnown RBP13.91□□□□□ -0.18
RCCD1-202ENST00000554302 AP5S1Q9NUS5 200 aa13.91□□□□□ -0.18
RCCD1-202ENST00000554302 UBR4Q5T4S7 5183 aa13.91□□□□□ -0.18
RCCD1-202ENST00000554302 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.9□□□□□ -0.18
RCCD1-202ENST00000554302 C15orf56Q8N910 161 aa13.9□□□□□ -0.18
RCCD1-202ENST00000554302 GTSF1Q8WW33 167 aa13.9□□□□□ -0.18
RCCD1-202ENST00000554302 TRAV26-2A0A0B4J265 109 aa13.89□□□□□ -0.19
RCCD1-202ENST00000554302 SPACA4Q8TDM5 124 aa13.89□□□□□ -0.19
RCCD1-202ENST00000554302 A0A087WYN8 130 aa13.87□□□□□ -0.19
RCCD1-202ENST00000554302 GAGE12HA6NDE8 117 aa13.87□□□□□ -0.19
RCCD1-202ENST00000554302 NCR2O95944 276 aa13.87□□□□□ -0.19
RCCD1-202ENST00000554302 CHTF8P0CG12 524 aa13.87□□□□□ -0.19
RCCD1-202ENST00000554302 Q6ZNX1 250 aa13.87□□□□□ -0.19
RCCD1-202ENST00000554302 Q6ZRU5 148 aa13.86□□□□□ -0.19
RCCD1-202ENST00000554302 RPL39LQ96EH5 51 aaKnown RBP13.86□□□□□ -0.19
RCCD1-202ENST00000554302 H7C423 109 aa13.85□□□□□ -0.19
RCCD1-202ENST00000554302 MT1HL1P0DM35 61 aa13.85□□□□□ -0.19
RCCD1-202ENST00000554302 FOXA3P55318 350 aaPredicted RBP13.85□□□□□ -0.19
RCCD1-202ENST00000554302 CFAP161Q6P656 301 aa13.85□□□□□ -0.19
RCCD1-202ENST00000554302 PLAC8Q9NZF1 115 aa13.85□□□□□ -0.19
RCCD1-202ENST00000554302 TEX261Q6UWH6 196 aa13.84□□□□□ -0.19
RCCD1-202ENST00000554302 PLA2G2DQ9UNK4 145 aa13.84□□□□□ -0.19
RCCD1-202ENST00000554302 TMEM250H0YL14 139 aa13.83□□□□□ -0.2
RCCD1-202ENST00000554302 FAM231DQ6ZW35 169 aa13.83□□□□□ -0.2
RCCD1-202ENST00000554302 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.82□□□□□ -0.2
RCCD1-202ENST00000554302 IGKV2-29A2NJV5 120 aaPredicted RBP13.82□□□□□ -0.2
RCCD1-202ENST00000554302 SDHAF1A6NFY7 115 aa13.82□□□□□ -0.2
RCCD1-202ENST00000554302 RPS10P46783 165 aaKnown RBP13.82□□□□□ -0.2
RCCD1-202ENST00000554302 SMIM15Q7Z3B0 74 aa13.82□□□□□ -0.2
RCCD1-202ENST00000554302 CHCHD10Q8WYQ3 142 aaPredicted RBP13.82□□□□□ -0.2
RCCD1-202ENST00000554302 IGKV3OR2-268A0A0C4DH90 116 aa13.81□□□□□ -0.2
RCCD1-202ENST00000554302 TRBV6-5A0A0K0K1A5 114 aa13.81□□□□□ -0.2
RCCD1-202ENST00000554302 APCSP02743 223 aa13.81□□□□□ -0.2
RCCD1-202ENST00000554302 FGF6P10767 208 aa13.81□□□□□ -0.2
RCCD1-202ENST00000554302 AMMECR1LQ6DCA0 310 aa13.81□□□□□ -0.2
RCCD1-202ENST00000554302 DPH3Q96FX2 82 aa13.81□□□□□ -0.2
RCCD1-202ENST00000554302 GVQW2A0A096LPI5 108 aaPredicted RBP13.8□□□□□ -0.2
RCCD1-202ENST00000554302 FAM231BA6NCW3 169 aa13.8□□□□□ -0.2
RCCD1-202ENST00000554302 GATCO43716 136 aaKnown RBP13.8□□□□□ -0.2
RCCD1-202ENST00000554302 COX6A2Q02221 97 aa13.8□□□□□ -0.2
RCCD1-202ENST00000554302 LYPD6BQ8NI32 183 aa13.8□□□□□ -0.2
RCCD1-202ENST00000554302 A8MWL6 223 aa13.79□□□□□ -0.2
RCCD1-202ENST00000554302 ZNF25P17030 456 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-202ENST00000554302 FOXI1Q12951 378 aa13.79□□□□□ -0.2
RCCD1-202ENST00000554302 HIGD2BQ4VC39 106 aa13.79□□□□□ -0.2
RCCD1-202ENST00000554302 CT83Q5H943 113 aa13.79□□□□□ -0.2
RCCD1-202ENST00000554302 RNASEKQ6P5S7 137 aaKnown RBP13.79□□□□□ -0.2
RCCD1-202ENST00000554302 TNXBP22105 4242 aa13.79□□□□□ -0.2
RCCD1-202ENST00000554302 I3L3M4 83 aa13.78□□□□□ -0.2
RCCD1-202ENST00000554302 NDUFS6O75380 124 aaKnown RBP13.78□□□□□ -0.2
RCCD1-202ENST00000554302 OR5A1Q8NGJ0 315 aa13.78□□□□□ -0.2
RCCD1-202ENST00000554302 PRSS3P2Q8NHM4 247 aa13.78□□□□□ -0.2
RCCD1-202ENST00000554302 ESDP10768 282 aa13.77□□□□□ -0.21
RCCD1-202ENST00000554302 FAM210AQ96ND0 272 aa13.77□□□□□ -0.21
RCCD1-202ENST00000554302 PHOX2AO14813 284 aa13.76□□□□□ -0.21
RCCD1-202ENST00000554302 GAS8-AS1O95177 125 aa13.76□□□□□ -0.21
RCCD1-202ENST00000554302 BLOC1S1P78537 153 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms