RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 CEP170BQ9Y4F5 1589 aaPredicted RBP2.13□□□□□ -2.07
TDP1-207ENST00000553617 UBR1Q8IWV7 1749 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 RALGAPBQ86X10 1494 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 PIK3C2BO00750 1634 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 FREM3P0C091 2139 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 ABCC6O95255 1503 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 ASXL1Q8IXJ9 1541 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 COL5A3P25940 1745 aaPredicted RBP2.12□□□□□ -2.07
TDP1-207ENST00000553617 XRN1Q8IZH2 1706 aaKnown RBP2.12□□□□□ -2.07
TDP1-207ENST00000553617 GLI2P10070 1586 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 KIAA0100Q14667 2235 aaKnown RBP2.12□□□□□ -2.07
TDP1-207ENST00000553617 IGHV3-64A0A075B6Q5 118 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 FXYD6-FXYD2A0A087WZ82 144 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 IGKV3D-11A0A0A0MRZ8 115 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 TRAV22A0A0B4J277 110 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 A0A1W2PNU3 283 aaPredicted RBP2.12□□□□□ -2.07
TDP1-207ENST00000553617 C3orf79P0CE67 100 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 MIFP14174 115 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 EDDM3BP56851 147 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 DEFB113Q30KQ7 82 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 ZNF791Q3KP31 576 aaPredicted RBP2.12□□□□□ -2.07
TDP1-207ENST00000553617 DEFB121Q5J5C9 76 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 C10orf128Q5T292 105 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 IGFL1Q6UW32 110 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 ZNF818PQ6ZRF7 136 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 LYPD6Q86Y78 171 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 Q8NAQ8 132 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 FXYD6Q9H0Q3 95 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 V9GYH0 126 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 MUC22E2RYF6 1773 aaPredicted RBP2.12□□□□□ -2.07
TDP1-207ENST00000553617 LRP5O75197 1615 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 SLX4Q8IY92 1834 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 GCC2Q8IWJ2 1684 aa2.12□□□□□ -2.07
TDP1-207ENST00000553617 MPDZO75970 2070 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 SIPA1L3O60292 1781 aaPredicted RBP2.11□□□□□ -2.07
TDP1-207ENST00000553617 TRBV7-3A0A075B6L6 115 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 TEX49A0A1B0GTD5 131 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 A0A1B0GU33 70 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 IQCF6A8MYZ5 107 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 CHKB-CPT1BH3BT56 60 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 FXYD1O00168 92 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 COX6CP09669 75 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 PYDC2Q56P42 97 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 SFTA2Q6UW10 78 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 Q8TAT8 98 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 LIMD2Q9BT23 127 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 HILPDAQ9Y5L2 63 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 PDCD11Q14690 1871 aaKnown RBP2.11□□□□□ -2.07
TDP1-207ENST00000553617 HEATR5BQ9P2D3 2071 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 ATP7AQ04656 1500 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 NEXMIFQ5QGS0 1516 aa2.11□□□□□ -2.07
TDP1-207ENST00000553617 LAMB1P07942 1786 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 CPAMD8Q8IZJ3 1885 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 MYO16Q9Y6X6 1858 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 TRBV25-1A0A075B6N4 114 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 CXorf51AA0A1B0GTR3 108 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 A0A1B0GWA3 101 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 SDHAF1A6NFY7 115 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 SNRPGP15A8MWD9 76 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 HMGN2P05204 90 aaKnown RBP2.1□□□□□ -2.07
TDP1-207ENST00000553617 P0C880 135 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 GCHFRP30047 84 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 Q5VV11 94 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 C2orf82Q6UX34 121 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 BAGE3Q86Y29 109 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 BAGE2Q86Y30 109 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 C20orf197Q8N268 126 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 IFI27L1Q96BM0 104 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 ARL2-SNX15V9GYD0 113 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 DLG5Q8TDM6 1919 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 MYOFQ9NZM1 2061 aa2.1□□□□□ -2.07
TDP1-207ENST00000553617 COL4A6Q14031 1691 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 TRAV23DV6A0A075B6W5 121 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 TRAV12-3A0A0B4J271 114 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 A0A0D9SFI3 127 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 A0A0J9YX75 114 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 MYMXA0A1B0GTQ4 84 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 LOC285095A0A1B0GVY8 99 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 TMEM30CPA0ZSE6 113 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 ZNF815PA8K554 130 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 TMEM14DPA8MWL7 114 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 ODF3BA8MYP8 253 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 F8WEM9 126 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.09□□□□□ -2.07
TDP1-207ENST00000553617 CLECL1Q8IZS7 167 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 C22orf24Q9Y442 160 aa2.09□□□□□ -2.07
TDP1-207ENST00000553617 AFDNP55196 1824 aaKnown RBP2.09□□□□□ -2.08
TDP1-207ENST00000553617 LTBP2Q14767 1821 aa2.09□□□□□ -2.08
TDP1-207ENST00000553617 ZGRF1Q86YA3 2104 aa2.09□□□□□ -2.08
TDP1-207ENST00000553617 MDC1Q14676 2089 aaKnown RBP2.08□□□□□ -2.08
TDP1-207ENST00000553617 SPTBP11277 2137 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 HEATR1Q9H583 2144 aaKnown RBP2.08□□□□□ -2.08
TDP1-207ENST00000553617 KIAA1549LQ6ZVL6 1849 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 AGLP35573 1532 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 KIAA0586Q9BVV6 1533 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 ADGRB2O60241 1585 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 ARHGEF5Q12774 1597 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 CDC42BPGQ6DT37 1551 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 UGGT1Q9NYU2 1555 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 MAST1Q9Y2H9 1570 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms