RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CSNK1G2-AS1Q8NCQ2 148 aa10.08□□□□□ -0.8
RAB3IP-216ENST00000552199 ZNRF2Q8NHG8 242 aa10.08□□□□□ -0.8
RAB3IP-216ENST00000552199 H3BRM9 83 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 FOSL1P15407 271 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 HERVK_113P61574 105 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 DAZ2Q13117 558 aaKnown RBP10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 UBE2V1Q13404 147 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 Q6ZTI0 123 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 NFE4Q86UQ8 179 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 GCSHP23434 173 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 C16orf74Q96GX8 76 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 ZNF479Q96JC4 524 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 VCX2Q9H322 139 aa10.07□□□□□ -0.8
RAB3IP-216ENST00000552199 VAMP3Q15836 100 aa10.06□□□□□ -0.8
RAB3IP-216ENST00000552199 TAL2Q16559 108 aa10.06□□□□□ -0.8
RAB3IP-216ENST00000552199 NOP10Q9NPE3 64 aaKnown RBP10.06□□□□□ -0.8
RAB3IP-216ENST00000552199 TRAV4A0A0B4J268 109 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 PLAC8L1A1L4L8 177 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 CCL25O15444 150 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 FXYD2P54710 66 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 CEND1Q8N111 149 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 PHLDA1Q8WV24 401 aaPredicted RBP10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 FAM104AQ969W3 186 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 JMJD1CQ15652 2540 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 IGHV3-38A0A0C4DH36 116 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 CRLF1O75462 422 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 CRYBA4P53673 196 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 PTTG1IPP53801 180 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 COTL1Q14019 142 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 AMELXQ99217 191 aa10.05□□□□□ -0.8
RAB3IP-216ENST00000552199 NSD1Q96L73 2696 aaPredicted RBP10.04□□□□□ -0.8
RAB3IP-216ENST00000552199 ZNF815PA8K554 130 aa10.04□□□□□ -0.8
RAB3IP-216ENST00000552199 K7EP13 123 aa10.04□□□□□ -0.8
RAB3IP-216ENST00000552199 HIVEP1P15822 2718 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 C9orf118A6NHY6 69 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 RRN3P1Q2M238 152 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 OVOL2Q9BRP0 275 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 SPANXA1Q9NS26 97 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 TRBV7-3A0A075B6L6 115 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 TRBV10-1A0A0K0K1A3 114 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 K7EQD1 137 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 INSL3P51460 131 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 AMMECR1LQ6DCA0 310 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 CEMP1Q6PRD7 247 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 HIST1H4GQ99525 98 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 UBE2D4Q9Y2X8 147 aa10.03□□□□□ -0.8
RAB3IP-216ENST00000552199 FN1P02751 2386 aaKnown RBP10.02□□□□□ -0.8
RAB3IP-216ENST00000552199 C2CD3Q4AC94 2353 aa10.02□□□□□ -0.8
RAB3IP-216ENST00000552199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-216ENST00000552199 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-216ENST00000552199 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 ZNF22P17026 224 aaPredicted RBP10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 RPL36AP83881 106 aaKnown RBP10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 C9orf66Q5T8R8 295 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 RPL36ALQ969Q0 106 aaKnown RBP10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 GAGE12BA1L429 117 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 GAGE7O76087 117 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 GAGE12FP0CL80 117 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 GAGE12GP0CL81 117 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 GAGE12IP0CL82 117 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 TSPEAR-AS2P59090 65 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 SPATA3Q8NHX4 192 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 PLEKHB2Q96CS7 222 aa10.01□□□□□ -0.81
RAB3IP-216ENST00000552199 CIDEAO60543 219 aa10□□□□□ -0.81
RAB3IP-216ENST00000552199 SLC25A29Q8N8R3 303 aa10□□□□□ -0.81
RAB3IP-216ENST00000552199 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 H3BUT2 72 aa9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 J3QQQ9 107 aa9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 LEPROTO15243 131 aa9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 MRPS36P82909 103 aaKnown RBP9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 SCGB1D4Q6XE38 83 aa9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 UBE2D3P61077 147 aa9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 UBE2D2P62837 147 aa9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 DAZ4Q86SG3 579 aaKnown RBP9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 CITED1Q99966 193 aa9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 DAZ3Q9NR90 486 aaKnown RBP9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 NHP2Q9NX24 153 aaKnown RBP9.99□□□□□ -0.81
RAB3IP-216ENST00000552199 NOTCH3Q9UM47 2321 aa9.98□□□□□ -0.81
RAB3IP-216ENST00000552199 Q6ZUT4 128 aa9.98□□□□□ -0.81
RAB3IP-216ENST00000552199 GAGE12JA6NER3 117 aa9.97□□□□□ -0.81
RAB3IP-216ENST00000552199 LGALS3P17931 250 aaKnown RBP9.97□□□□□ -0.81
RAB3IP-216ENST00000552199 GAGE4Q13068 117 aa9.97□□□□□ -0.81
RAB3IP-216ENST00000552199 GAGE5Q13069 117 aa9.97□□□□□ -0.81
RAB3IP-216ENST00000552199 GAGE13Q4V321 117 aa9.97□□□□□ -0.81
RAB3IP-216ENST00000552199 NAA38Q9BRA0 125 aaKnown RBP9.97□□□□□ -0.81
RAB3IP-216ENST00000552199 A0A0J9YY99 117 aa9.97□□□□□ -0.81
RAB3IP-216ENST00000552199 K7ERJ3 54 aa9.97□□□□□ -0.81
RAB3IP-216ENST00000552199 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.81
RAB3IP-216ENST00000552199 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.81
RAB3IP-216ENST00000552199 C12orf74Q32Q52 190 aa9.96□□□□□ -0.81
RAB3IP-216ENST00000552199 NTM-AS1Q6ZSK4 140 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms