RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 OVOL2Q9BRP0 275 aa3.81□□□□□ -1.8
LSM3P2-201ENST00000551246 RBMY1BA6NDE4 496 aaKnown RBP3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 RBMY1EA6NEQ0 496 aaKnown RBP3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 ENSAO43768 121 aaKnown RBP3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 IGF1P05019 195 aa3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 CCKP06307 115 aa3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 RBMY1DP0C7P1 496 aaKnown RBP3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 RBMY1A1P0DJD3 496 aaKnown RBP3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 RBMY1CP0DJD4 496 aa3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 RBMY1FQ15415 496 aaKnown RBP3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 SS18Q15532 418 aa3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 C9orf129Q5T035 196 aaKnown RBP3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 C9orf106Q8NAJ2 232 aa3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 ZNF625Q96I27 306 aaPredicted RBP3.8□□□□□ -1.8
LSM3P2-201ENST00000551246 TRBV7-6A0A0J9YX20 115 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 EPOPA6NHQ4 379 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 KLLNB2CW77 178 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 NDUFC1O43677 76 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 MGPP08493 103 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 NBL1P41271 181 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 S100A7L2Q5SY68 101 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 LYPD2Q6UXB3 125 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 C11orf44Q8N8P7 122 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 LY6G5BQ8NDX9 201 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 NUP37Q8NFH4 326 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 PHLDA3Q9Y5J5 127 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 DOCK10Q96BY6 2186 aa3.79□□□□□ -1.8
LSM3P2-201ENST00000551246 COL27A1Q8IZC6 1860 aaPredicted RBP3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 GNRH2O43555 120 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 NDUFB3O43676 98 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 HILS1P60008 231 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 NDPQ00604 133 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 HIST2H2BCQ6DN03 193 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 HIST2H2BDQ6DRA6 164 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 IGFL2Q6UWQ7 119 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 PRR15Q8IV56 129 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 C20orf197Q8N268 126 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 DEFB127Q9H1M4 99 aa3.78□□□□□ -1.8
LSM3P2-201ENST00000551246 IGHV3-64A0A075B6Q5 118 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 TRAV13-2A0A0B4J235 113 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 H0YGX0 51 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 ERC2-IT1O76042 136 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 DNAL4O96015 105 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 SIRPDQ9H106 197 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 LINC00474Q9P2X8 69 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 LAMTOR3Q9UHA4 124 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 S4R3C0 116 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 PLXNB1O43157 2135 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 ABCA1O95477 2261 aa3.77□□□□□ -1.81
LSM3P2-201ENST00000551246 IGHV3-16A0A0C4DH30 117 aa3.76□□□□□ -1.81
LSM3P2-201ENST00000551246 PLAC8L1A1L4L8 177 aa3.76□□□□□ -1.81
LSM3P2-201ENST00000551246 ODF3BA8MYP8 253 aa3.76□□□□□ -1.81
LSM3P2-201ENST00000551246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.76□□□□□ -1.81
LSM3P2-201ENST00000551246 WFDC11Q8NEX6 87 aa3.76□□□□□ -1.81
LSM3P2-201ENST00000551246 CHCHD7Q9BUK0 85 aa3.76□□□□□ -1.81
LSM3P2-201ENST00000551246 C14orf132Q9NPU4 83 aa3.76□□□□□ -1.81
LSM3P2-201ENST00000551246 CACNA1GO43497 2377 aa3.76□□□□□ -1.81
LSM3P2-201ENST00000551246 PRRC2AP48634 2157 aaKnown RBP3.76□□□□□ -1.81
LSM3P2-201ENST00000551246 IGKV2-28A0A075B6P5 120 aa3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 TRBV7-4A0A0J9YYF1 115 aa3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 IGKV2-29A2NJV5 120 aaPredicted RBP3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 A8MZ25 164 aa3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 IGKV2D-28P01615 120 aa3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 S100A4P26447 101 aaKnown RBP3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 CD164Q04900 197 aa3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 HTTP42858 3142 aa3.75□□□□□ -1.81
LSM3P2-201ENST00000551246 A0A087WYN8 130 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 IGHV7-81A0A0B4J1V7 117 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 TRAV12-3A0A0B4J271 114 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 A0A0U1RRA0 63 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 M0R1B8 84 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 LY6G6DO95868 133 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 C15orf32Q32M92 178 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 LINC00337Q8N6G1 96 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 Q9HAA7 133 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 DPM3Q9P2X0 92 aa3.74□□□□□ -1.81
LSM3P2-201ENST00000551246 MUC4Q99102 2169 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 TRAV23DV6A0A075B6W5 121 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 IGHV3-23P01764 117 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 CD28P10747 220 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 MIFP14174 115 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 BLCAPP62952 87 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 PIK3CD-AS1Q5SR53 167 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 Q6ZTC4 211 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 MIR7-3HGQ8N6C7 128 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 CNEP1R1Q8N9A8 125 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 C11orf72Q8NBR9 251 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 LINC01560Q8TB33 94 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 RMI2Q96E14 147 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 BPESC1Q9GZL8 116 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 CDKN2A-AS1Q9UH64 79 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 MALRD1Q5VYJ5 2156 aa3.73□□□□□ -1.81
LSM3P2-201ENST00000551246 LOC110117498A0A087WWA1 95 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 TRAV10A0A0B4J240 114 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 SMIM1B2RUZ4 78 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 F8WEM9 126 aa3.72□□□□□ -1.81
LSM3P2-201ENST00000551246 JMJD7-PLA2G4BH0Y9G9 81 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms