RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 SYT8Q8NBV8 401 aa4.42□□□□□ -1.7
TMEM106C-215ENST00000550552 PRADC1Q9BSG0 188 aa4.42□□□□□ -1.7
TMEM106C-215ENST00000550552 EIF5A2Q9GZV4 153 aaKnown RBP4.42□□□□□ -1.7
TMEM106C-215ENST00000550552 RNASE7Q9H1E1 156 aaKnown RBP4.42□□□□□ -1.7
TMEM106C-215ENST00000550552 MSRB1Q9NZV6 116 aa4.42□□□□□ -1.7
TMEM106C-215ENST00000550552 HSPB8Q9UJY1 196 aa4.42□□□□□ -1.7
TMEM106C-215ENST00000550552 CSDC2Q9Y534 153 aaKnown RBP4.42□□□□□ -1.7
TMEM106C-215ENST00000550552 GAGE12JA6NER3 117 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 P01737 135 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 SRP19P09132 144 aaKnown RBP4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 LINC00694P0DN24 101 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 FABP4P15090 132 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 TIRAPP58753 221 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 LINC00315P59091 139 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 SRSF3P84103 164 aaKnown RBP4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 GAGE4Q13068 117 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 PMVKQ15126 192 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 GAGE13Q4V321 117 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 CDPF1Q6NVV7 123 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 LYZL1Q6UWQ5 148 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 LINC00336Q6ZUF6 198 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 SH2D6Q7Z4S9 175 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 WFDC10BQ8IUB3 73 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 C6orf223Q8N319 242 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 FER1L6-AS1Q8NA97 138 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 ATP6V0E2Q8NHE4 81 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 SMDT1Q9H4I9 107 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 ERG28Q9UKR5 140 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 KIF25-AS1Q9Y6Z4 181 aa4.41□□□□□ -1.7
TMEM106C-215ENST00000550552 RHODO00212 210 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 NTF3P20783 257 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 TNP2Q05952 138 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 TMEM97Q5BJF2 176 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 SPANXN1Q5VSR9 72 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 GTSF1Q8WW33 167 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 GTSF1LQ9H1H1 148 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 SS18L2Q9UHA2 77 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 V9GYY9 64 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 PKHD1P08F94 4074 aa4.4□□□□□ -1.71
TMEM106C-215ENST00000550552 DNAH11Q96DT5 4516 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 KIAA1109Q2LD37 5005 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 IFITM10A6NMD0 228 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 F2Z2F3 143 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 DNAH10OSP0CZ25 163 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 EVI2AP22794 236 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 TTC32Q5I0X7 151 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 COA6Q5JTJ3 125 aaKnown RBP4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 SOHLH1Q5JUK2 328 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 Q6ZRN7 208 aaPredicted RBP4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 FAM231DQ6ZW35 169 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 Q8N3U1 123 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 HIST1H2BLQ99880 126 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 SMIM7Q9BQ49 75 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 SPANXDQ9BXN6 97 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 CTDSP1Q9GZU7 261 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 RPP21Q9H633 154 aaKnown RBP4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 RPS10P5Q9NQ39 176 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 LY96Q9Y6Y9 160 aa4.39□□□□□ -1.71
TMEM106C-215ENST00000550552 A0A087WWC5 75 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 IGHV3-38A0A0C4DH36 116 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 TRBV10-1A0A0K0K1A3 114 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 ZNF727A8MUV8 499 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 F5H697 171 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 CTRLP40313 264 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 RPS10P46783 165 aaKnown RBP4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 AMTP48728 403 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 CAMPP49913 170 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 UBE2D3P61077 147 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 UBE2D2P62837 147 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 OR10J3Q5JRS4 329 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 LELP1Q5T871 98 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 NEXN-AS1Q8NBZ9 246 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 OR5A1Q8NGJ0 315 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 DNAJC30Q96LL9 226 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 C1orf43Q9BWL3 253 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 CNFNQ9BYD5 112 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 UQCR10Q9UDW1 63 aa4.38□□□□□ -1.71
TMEM106C-215ENST00000550552 TRBV7-3A0A075B6L6 115 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 TRAV9-2A0A087WT02 112 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 TRAV8-6A0A0B4J262 113 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 M0QY20 66 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 FOXA3P55318 350 aaPredicted RBP4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 CACNG7P62955 275 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 SMAGPQ0VAQ4 97 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 ZNF56Q15929 161 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 LINC01556Q5JQF7 62 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 OR10G8Q8NGN5 311 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 AP1S3Q96PC3 154 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 NAT8BQ9UHF3 227 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 LAMTOR2Q9Y2Q5 125 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 HERC2O95714 4834 aa4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 DYNC1H1Q14204 4646 aaKnown RBP4.37□□□□□ -1.71
TMEM106C-215ENST00000550552 A8MWL6 223 aa4.36□□□□□ -1.71
TMEM106C-215ENST00000550552 IBA57-AS1B1ANH7 110 aa4.36□□□□□ -1.71
TMEM106C-215ENST00000550552 HIST1H2BKO60814 126 aa4.36□□□□□ -1.71
TMEM106C-215ENST00000550552 IGHV3-30P01768 117 aa4.36□□□□□ -1.71
TMEM106C-215ENST00000550552 IGHV3-33P01772 117 aa4.36□□□□□ -1.71
TMEM106C-215ENST00000550552 HIST1H2BJP06899 126 aa4.36□□□□□ -1.71
TMEM106C-215ENST00000550552 IGHV3-30-3P0DP02 117 aa4.36□□□□□ -1.71
TMEM106C-215ENST00000550552 IGHV3-30-5P0DP03 117 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms