RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 DAZAP1Q96EP5 407 aaKnown RBP4.89□□□□□ -1.63
NEK3-201ENST00000550331 TRAV8-4A0A0B4J246 113 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 IGHV1-24A0A0C4DH33 117 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 A0A1B0GV50 99 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 HMSDA8MTL9 139 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 M0QY20 66 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 P01737 135 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 IGLC6P0CF74 106 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 GZMBP10144 247 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 RPL35P42766 123 aaKnown RBP4.88□□□□□ -1.63
NEK3-201ENST00000550331 HNRNPA3P51991 378 aaKnown RBP4.88□□□□□ -1.63
NEK3-201ENST00000550331 CIRBPQ14011 172 aaKnown RBP4.88□□□□□ -1.63
NEK3-201ENST00000550331 CT83Q5H943 113 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 KRTAP5-11Q6L8G4 156 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 SDIM1Q6ZPB5 146 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 C11orf52Q96A22 123 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 MANBALQ9NQG1 85 aa4.88□□□□□ -1.63
NEK3-201ENST00000550331 A0A0D9SG52 128 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 A0A1B0GUV1 79 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 SMLR1H3BR10 107 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 PANO1I0J062 215 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 BCL2L11O43521 198 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 MGPP08493 103 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 RPS20P60866 119 aaKnown RBP4.87□□□□□ -1.63
NEK3-201ENST00000550331 SSTP61278 116 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 CACNG7P62955 275 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 EIF5AP63241 154 aaKnown RBP4.87□□□□□ -1.63
NEK3-201ENST00000550331 RGS21Q2M5E4 152 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 Q6ZRU5 148 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 FER1L6-AS1Q8NA97 138 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 C20orf203Q8NBC4 194 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 SMIM12Q96EX1 92 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 PGLYRP4Q96LB8 373 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
NEK3-201ENST00000550331 IGLV10-54A0A075B6I4 117 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.86□□□□□ -1.63
NEK3-201ENST00000550331 KANTRA0A1W2PQU2 76 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 hDV102S1A0JD36 115 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 XKRY2A2RUG3 117 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 F2Z2F3 143 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 CENPWQ5EE01 88 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 RASL11AQ6T310 242 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 OR2D3Q8NGH3 330 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 RNF185Q96GF1 192 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 TPPP3Q9BW30 176 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 AP5S1Q9NUS5 200 aa4.86□□□□□ -1.63
NEK3-201ENST00000550331 IGLV4-60A0A075B6I1 120 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 IGHV3-64A0A075B6Q5 118 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 TRAV1-1A0A0B4J248 108 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 C19orf71A6NCJ1 209 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 TRGC1P0CF51 173 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 NKX2-5P52952 324 aaPredicted RBP4.85□□□□□ -1.63
NEK3-201ENST00000550331 CCL20P78556 96 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 WDR73Q6P4I2 378 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 NIT2Q9NQR4 276 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 GNG13Q9P2W3 67 aa4.85□□□□□ -1.63
NEK3-201ENST00000550331 TEX46H3BTG2 121 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 UBE2L6O14933 153 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 PDE6DO43924 150 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 CTRLP40313 264 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 GNG4P50150 75 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 RAB5CP51148 216 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 COTL1Q14019 142 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 C9orf62Q8N4C0 152 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 SPACA4Q8TDM5 124 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 DPH3P1Q9H4G8 78 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 BIN3Q9NQY0 253 aa4.84□□□□□ -1.63
NEK3-201ENST00000550331 A0A087WYN8 130 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 IFNA1P01562 189 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 NTF3P20783 257 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 AMTP48728 403 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 SULT1A2P50226 295 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 MEF2BQ02080 365 aaPredicted RBP4.83□□□□□ -1.64
NEK3-201ENST00000550331 EIF5AL1Q6IS14 154 aaKnown RBP4.83□□□□□ -1.64
NEK3-201ENST00000550331 LYZL1Q6UWQ5 148 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 DPH3Q96FX2 82 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 CNFNQ9BYD5 112 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 GFRA4Q9GZZ7 299 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
NEK3-201ENST00000550331 TRBV20OR9-2A0A075B6H5 130 aa4.82□□□□□ -1.64
NEK3-201ENST00000550331 RAB19A4D1S5 217 aa4.82□□□□□ -1.64
NEK3-201ENST00000550331 CHTF8P0CG12 524 aa4.82□□□□□ -1.64
NEK3-201ENST00000550331 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
NEK3-201ENST00000550331 C15orf56Q8N910 161 aa4.82□□□□□ -1.64
NEK3-201ENST00000550331 C7orf33Q8WU49 177 aa4.82□□□□□ -1.64
NEK3-201ENST00000550331 GAGE12HA6NDE8 117 aa4.81□□□□□ -1.64
NEK3-201ENST00000550331 H7C423 109 aa4.81□□□□□ -1.64
NEK3-201ENST00000550331 PHOX2AO14813 284 aa4.81□□□□□ -1.64
NEK3-201ENST00000550331 NDUFS6O75380 124 aaKnown RBP4.81□□□□□ -1.64
NEK3-201ENST00000550331 NCR2O95944 276 aa4.81□□□□□ -1.64
NEK3-201ENST00000550331 RPS10P46783 165 aaKnown RBP4.81□□□□□ -1.64
NEK3-201ENST00000550331 MED9Q9NWA0 146 aa4.81□□□□□ -1.64
NEK3-201ENST00000550331 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
NEK3-201ENST00000550331 BCL2P10415 239 aa4.8□□□□□ -1.64
NEK3-201ENST00000550331 TAGLN2P37802 199 aaKnown RBP4.8□□□□□ -1.64
NEK3-201ENST00000550331 COX6A2Q02221 97 aa4.8□□□□□ -1.64
NEK3-201ENST00000550331 TWIST1Q15672 202 aa4.8□□□□□ -1.64
NEK3-201ENST00000550331 AMMECR1LQ6DCA0 310 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms