RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 LINC00694P0DN24 101 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 PRB4P10163 310 aaPredicted RBP4.65□□□□□ -1.67
NPAS3-207ENST00000549770 FXYD7P58549 80 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 SNRPD3P62318 126 aaKnown RBP4.65□□□□□ -1.67
NPAS3-207ENST00000549770 SLC38A11Q08AI6 406 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 ARL16Q0P5N6 197 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 RRN3P1Q2M238 152 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 LGALS9BQ3B8N2 356 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 GDF5OSQ5U4N7 250 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 IGFL4Q6B9Z1 124 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 LGALS9CQ6DKI2 356 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 SH2D6Q7Z4S9 175 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 FAM19A2Q8N3H0 131 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 RPP25LQ8N5L8 163 aaKnown RBP4.65□□□□□ -1.67
NPAS3-207ENST00000549770 RAB37Q96AX2 223 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 LINC00526Q96FQ7 95 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 MLST8Q9BVC4 326 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 IMUPQ9GZP8 106 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.67
NPAS3-207ENST00000549770 LCE6AA0A183 80 aa4.64□□□□□ -1.67
NPAS3-207ENST00000549770 F6UB75 175 aa4.64□□□□□ -1.67
NPAS3-207ENST00000549770 CST7O76096 145 aa4.64□□□□□ -1.67
NPAS3-207ENST00000549770 NANOS2P60321 138 aaKnown RBP4.64□□□□□ -1.67
NPAS3-207ENST00000549770 TMEM14EPQ6UXP3 125 aa4.64□□□□□ -1.67
NPAS3-207ENST00000549770 PQLC2Q6ZP29 291 aa4.64□□□□□ -1.67
NPAS3-207ENST00000549770 GATAD1Q8WUU5 269 aa4.64□□□□□ -1.67
NPAS3-207ENST00000549770 TMEM147Q9BVK8 224 aa4.64□□□□□ -1.67
NPAS3-207ENST00000549770 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
NPAS3-207ENST00000549770 XCL2Q9UBD3 114 aa4.64□□□□□ -1.67
NPAS3-207ENST00000549770 H3BMM0 161 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 SOCS3O14543 225 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 PAGE4O60829 102 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 CRYGAP11844 174 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 VWC2Q2TAL6 325 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 FAM231DQ6ZW35 169 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 C3orf22Q8N5N4 141 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 RNF182Q8N6D2 247 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 URB1-AS1Q96HZ7 61 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 C17orf77Q96MU5 243 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 C18orf15Q96N68 181 aa4.63□□□□□ -1.67
NPAS3-207ENST00000549770 NAA38Q9BRA0 125 aaKnown RBP4.63□□□□□ -1.67
NPAS3-207ENST00000549770 SLC25A39Q9BZJ4 359 aaPredicted RBP4.63□□□□□ -1.67
NPAS3-207ENST00000549770 DNAH2Q9P225 4427 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 IGHV3OR16-12A0A075B7B8 117 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 IGHV4-28A0A0C4DH34 117 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 A0A1B0GXF2 115 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 H3BRN7 92 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 H3BTX0 84 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 IGLC6P0CF74 106 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 RBMY1A1P0DJD3 496 aaKnown RBP4.62□□□□□ -1.67
NPAS3-207ENST00000549770 RBMY1CP0DJD4 496 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 HLA-DMBP28068 263 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 HERVK_113P63121 156 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 ZNF415Q09FC8 603 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 RBMY1FQ15415 496 aaKnown RBP4.62□□□□□ -1.67
NPAS3-207ENST00000549770 C9orf153Q5TBE3 101 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 Q5XG85 94 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 PATE2Q6UY27 113 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 NFE4Q86UQ8 179 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 Q8NAQ8 132 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 OR1L4Q8NGR5 311 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 C11orf45Q8TAV5 145 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 PLEKHB2Q96CS7 222 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 MGST2Q99735 147 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 SHANK2-AS3Q9BTD1 123 aa4.62□□□□□ -1.67
NPAS3-207ENST00000549770 TRBV20-1A0A075B6N2 111 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 TRAV8-2A0A0B4J237 113 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 UBE2L5PA0A1B0GUS4 154 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 NUPR2A6NF83 97 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 K7EN84 100 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 COX7A2P2O60397 106 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 NDUFB4O95168 129 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 CAMPP49913 170 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 FXYD2P54710 66 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 MORN5Q5VZ52 161 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 MIC13Q5XKP0 118 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 CEMP1Q6PRD7 247 aaPredicted RBP4.61□□□□□ -1.67
NPAS3-207ENST00000549770 CEND1Q8N111 149 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 CSNK1G2-AS1Q8NCQ2 148 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 CARD19Q96LW7 228 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 C11orf68Q9H3H3 251 aaKnown RBP4.61□□□□□ -1.67
NPAS3-207ENST00000549770 ZNF331Q9NQX6 463 aaPredicted RBP4.61□□□□□ -1.67
NPAS3-207ENST00000549770 CELA1Q9UNI1 258 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 KMT2AQ03164 3969 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 FRAS1Q86XX4 4008 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 DNAH6Q9C0G6 4158 aa4.61□□□□□ -1.67
NPAS3-207ENST00000549770 TRAV4A0A0B4J268 109 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 A0A0J9YX75 114 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 ATP5LO75964 103 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 LY6G6CO95867 125 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 MIFP14174 115 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 RPL13AP40429 203 aaKnown RBP4.6□□□□□ -1.67
NPAS3-207ENST00000549770 UBE2D3P61077 147 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 UBE2D2P62837 147 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 LINC00336Q6ZUF6 198 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 LINC00305Q7Z4B0 112 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 GATD1Q8NB37 220 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 CHAC1Q9BUX1 264 aa4.6□□□□□ -1.67
NPAS3-207ENST00000549770 LOC107984640A0A0U1RRK4 108 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms