RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 A8MWV9 139 aa8.77□□□□□ -1.01
RAPGEF3-219ENST00000549151 RHOHQ15669 191 aa8.77□□□□□ -1.01
RAPGEF3-219ENST00000549151 NSUN5P1Q3KNT7 163 aa8.77□□□□□ -1.01
RAPGEF3-219ENST00000549151 TNFRSF18Q9Y5U5 241 aa8.77□□□□□ -1.01
RAPGEF3-219ENST00000549151 LEPROTO15243 131 aa8.77□□□□□ -1.01
RAPGEF3-219ENST00000549151 NOTCH2Q04721 2471 aa8.77□□□□□ -1.01
RAPGEF3-219ENST00000549151 ERG28Q9UKR5 140 aa8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 TRGV11A0A075B6L2 103 aa8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 IGKV2-29A2NJV5 120 aaPredicted RBP8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 FHL3Q13643 280 aa8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 CARD19Q96LW7 228 aa8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 IGHV3OR16-12A0A075B7B8 117 aa8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 MT-ATP8P03928 68 aa8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 ANKRD29Q8N6D5 301 aa8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 TIMM21Q9BVV7 248 aa8.76□□□□□ -1.01
RAPGEF3-219ENST00000549151 EIF4EBP3O60516 100 aaPredicted RBP8.75□□□□□ -1.01
RAPGEF3-219ENST00000549151 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
RAPGEF3-219ENST00000549151 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
RAPGEF3-219ENST00000549151 IGHV3-30-3P0DP02 117 aa8.75□□□□□ -1.01
RAPGEF3-219ENST00000549151 TEN1Q86WV5 123 aa8.75□□□□□ -1.01
RAPGEF3-219ENST00000549151 LINC01356Q8N9X3 169 aa8.75□□□□□ -1.01
RAPGEF3-219ENST00000549151 Q6ZSN1 163 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 ODF3Q96PU9 254 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 TRBV20-1A0A075B6N2 111 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 SLC25A20O43772 301 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 IGHV3-33P01772 117 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 ELANEP08246 267 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 CKS1BP61024 79 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 C11orf44Q8N8P7 122 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 LINC01587Q99440 93 aa8.74□□□□□ -1.01
RAPGEF3-219ENST00000549151 A0A0U1RRA0 63 aa8.73□□□□□ -1.01
RAPGEF3-219ENST00000549151 Q6ZSV7 163 aa8.73□□□□□ -1.01
RAPGEF3-219ENST00000549151 NIPBLQ6KC79 2804 aaeCLIP8.73□□□□□ -1.01
RAPGEF3-219ENST00000549151 XGP55808 180 aa8.73□□□□□ -1.01
RAPGEF3-219ENST00000549151 DAND5Q8N907 189 aa8.73□□□□□ -1.01
RAPGEF3-219ENST00000549151 VPREB3Q9UKI3 123 aa8.73□□□□□ -1.01
RAPGEF3-219ENST00000549151 MTORP42345 2549 aa8.73□□□□□ -1.01
RAPGEF3-219ENST00000549151 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
RAPGEF3-219ENST00000549151 TMEM61Q8N0U2 210 aa8.72□□□□□ -1.01
RAPGEF3-219ENST00000549151 A0A1B0GV72 72 aa8.72□□□□□ -1.01
RAPGEF3-219ENST00000549151 RBMY1BA6NDE4 496 aaKnown RBP8.72□□□□□ -1.01
RAPGEF3-219ENST00000549151 RBMY1EA6NEQ0 496 aaKnown RBP8.72□□□□□ -1.01
RAPGEF3-219ENST00000549151 RBMY1DP0C7P1 496 aaKnown RBP8.72□□□□□ -1.01
RAPGEF3-219ENST00000549151 TMEM263Q8WUH6 116 aaKnown RBP8.72□□□□□ -1.01
RAPGEF3-219ENST00000549151 ATP6V0E2Q8NHE4 81 aa8.72□□□□□ -1.01
RAPGEF3-219ENST00000549151 NDUFA12Q9UI09 145 aa8.72□□□□□ -1.01
RAPGEF3-219ENST00000549151 SCGB1A1P11684 91 aa8.71□□□□□ -1.01
RAPGEF3-219ENST00000549151 PRB1P04280 392 aa8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 GATA3P23771 443 aa8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 DYNLRB2Q8TF09 96 aa8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 ZNF702PQ9H963 129 aa8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 H3BMM0 161 aa8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 Q6ZUT4 128 aa8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 UBE2E2Q96LR5 201 aa8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 GEMIN7Q9H840 131 aaKnown RBP8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 XCL2Q9UBD3 114 aa8.71□□□□□ -1.02
RAPGEF3-219ENST00000549151 ACANP16112 2415 aa8.7□□□□□ -1.02
RAPGEF3-219ENST00000549151 DGAT2L7PQ6IED9 249 aa8.7□□□□□ -1.02
RAPGEF3-219ENST00000549151 NTN5Q8WTR8 489 aaPredicted RBP8.7□□□□□ -1.02
RAPGEF3-219ENST00000549151 LINC00467Q9BRT7 94 aa8.7□□□□□ -1.02
RAPGEF3-219ENST00000549151 M0R2P5 195 aa8.69□□□□□ -1.02
RAPGEF3-219ENST00000549151 FAM104AQ969W3 186 aa8.69□□□□□ -1.02
RAPGEF3-219ENST00000549151 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.69□□□□□ -1.02
RAPGEF3-219ENST00000549151 IGHV3-53P01767 116 aa8.69□□□□□ -1.02
RAPGEF3-219ENST00000549151 CRYBA4P53673 196 aa8.69□□□□□ -1.02
RAPGEF3-219ENST00000549151 ZNF415Q09FC8 603 aa8.69□□□□□ -1.02
RAPGEF3-219ENST00000549151 A0A1W2PRX2 142 aa8.68□□□□□ -1.02
RAPGEF3-219ENST00000549151 TRIAP1O43715 76 aa8.68□□□□□ -1.02
RAPGEF3-219ENST00000549151 FN1P02751 2386 aaKnown RBP8.68□□□□□ -1.02
RAPGEF3-219ENST00000549151 FASNP49327 2511 aaKnown RBP8.68□□□□□ -1.02
RAPGEF3-219ENST00000549151 IGHV1-58A0A0C4DH39 117 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 A0A0B4J2C4 111 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 MRPS36P82909 103 aaKnown RBP8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 CHCHD7Q9BUK0 85 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 CDKN2A-AS1Q9UH64 79 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 TEX49A0A1B0GTD5 131 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 TMEM89A2RUT3 159 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 DSCR9P59020 149 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 CLEC2BQ92478 149 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 UBE2D4Q9Y2X8 147 aa8.67□□□□□ -1.02
RAPGEF3-219ENST00000549151 ATXN8Q156A1 80 aa8.66□□□□□ -1.02
RAPGEF3-219ENST00000549151 Q6YL49 198 aa8.66□□□□□ -1.02
RAPGEF3-219ENST00000549151 MAP6D1Q9H9H5 199 aa8.66□□□□□ -1.02
RAPGEF3-219ENST00000549151 NDUFA7O95182 113 aa8.66□□□□□ -1.02
RAPGEF3-219ENST00000549151 VSIG2Q96IQ7 327 aa8.66□□□□□ -1.02
RAPGEF3-219ENST00000549151 PYGO1Q9Y3Y4 419 aa8.66□□□□□ -1.02
RAPGEF3-219ENST00000549151 KRTAP10-9P60411 292 aa8.65□□□□□ -1.02
RAPGEF3-219ENST00000549151 LITAFQ99732 161 aa8.65□□□□□ -1.02
RAPGEF3-219ENST00000549151 TRGV1A0A0A0MS02 117 aa8.65□□□□□ -1.02
RAPGEF3-219ENST00000549151 CITED1Q99966 193 aa8.65□□□□□ -1.02
RAPGEF3-219ENST00000549151 FLNAP21333 2647 aaKnown RBP8.65□□□□□ -1.03
RAPGEF3-219ENST00000549151 TRAV26-1A0A087WT03 109 aa8.65□□□□□ -1.03
RAPGEF3-219ENST00000549151 TRAV13-1A0A0B4J241 112 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms