RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
CACNB3-209ENST00000548860 HIGD1BQ9P298 99 aa10.54□□□□□ -0.72
CACNB3-209ENST00000548860 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
CACNB3-209ENST00000548860 M0R2P5 195 aa10.54□□□□□ -0.72
CACNB3-209ENST00000548860 RS1O15537 224 aa10.54□□□□□ -0.72
CACNB3-209ENST00000548860 TSPAN13O95857 204 aa10.54□□□□□ -0.72
CACNB3-209ENST00000548860 CNFNQ9BYD5 112 aa10.54□□□□□ -0.72
CACNB3-209ENST00000548860 TRGV4A0A0C4DH28 118 aa10.54□□□□□ -0.72
CACNB3-209ENST00000548860 VPREB3Q9UKI3 123 aa10.54□□□□□ -0.72
CACNB3-209ENST00000548860 ZNF415Q09FC8 603 aa10.53□□□□□ -0.72
CACNB3-209ENST00000548860 GCN1Q92616 2671 aaKnown RBP10.53□□□□□ -0.72
CACNB3-209ENST00000548860 TSPEAR-AS2P59090 65 aa10.53□□□□□ -0.72
CACNB3-209ENST00000548860 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
CACNB3-209ENST00000548860 PRIMA1Q86XR5 153 aa10.53□□□□□ -0.72
CACNB3-209ENST00000548860 UFSP1Q6NVU6 142 aa10.52□□□□□ -0.72
CACNB3-209ENST00000548860 TM2D2Q9BX73 214 aa10.52□□□□□ -0.72
CACNB3-209ENST00000548860 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.72
CACNB3-209ENST00000548860 TCL1BO95988 128 aa10.52□□□□□ -0.73
CACNB3-209ENST00000548860 C2orf82Q6UX34 121 aa10.52□□□□□ -0.73
CACNB3-209ENST00000548860 WFDC10AQ9H1F0 79 aa10.52□□□□□ -0.73
CACNB3-209ENST00000548860 TMEM141Q96I45 108 aa10.52□□□□□ -0.73
CACNB3-209ENST00000548860 NDUFA7O95182 113 aa10.51□□□□□ -0.73
CACNB3-209ENST00000548860 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
CACNB3-209ENST00000548860 LINC01619G3V211 115 aa10.51□□□□□ -0.73
CACNB3-209ENST00000548860 PFN2P35080 140 aa10.51□□□□□ -0.73
CACNB3-209ENST00000548860 SLC25A20O43772 301 aa10.51□□□□□ -0.73
CACNB3-209ENST00000548860 GAGE6Q13070 117 aa10.51□□□□□ -0.73
CACNB3-209ENST00000548860 SNCGO76070 127 aa10.5□□□□□ -0.73
CACNB3-209ENST00000548860 CLEC2BQ92478 149 aa10.5□□□□□ -0.73
CACNB3-209ENST00000548860 TRBV20-1A0A075B6N2 111 aa10.5□□□□□ -0.73
CACNB3-209ENST00000548860 TRAV12-1A0A0B4J245 112 aa10.5□□□□□ -0.73
CACNB3-209ENST00000548860 A0A0J9YY99 117 aa10.5□□□□□ -0.73
CACNB3-209ENST00000548860 HERV-K104P63124 156 aa10.5□□□□□ -0.73
CACNB3-209ENST00000548860 TTC32Q5I0X7 151 aa10.5□□□□□ -0.73
CACNB3-209ENST00000548860 Q6ZUT4 128 aa10.5□□□□□ -0.73
CACNB3-209ENST00000548860 SPANXB1Q9NS25 103 aaPredicted RBP10.5□□□□□ -0.73
CACNB3-209ENST00000548860 M0QY20 66 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 INSP01308 110 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 CRIP2P52943 208 aaPredicted RBP10.49□□□□□ -0.73
CACNB3-209ENST00000548860 CFC1BP0CG36 223 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 CFC1P0CG37 223 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 LINC00158P58513 81 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 NDUFA11Q86Y39 141 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 C20orf203Q8NBC4 194 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 K7EQG2 157 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 SHISA2Q6UWI4 295 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 SMIM20Q8N5G0 67 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 IGHV3-30-3P0DP02 117 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 TAL2Q16559 108 aa10.49□□□□□ -0.73
CACNB3-209ENST00000548860 DEFB4AO15263 64 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 CRYGDP07320 174 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 ANKRD29Q8N6D5 301 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 ATRQ13535 2644 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 PF4P02776 101 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 ZNF575Q86XF7 245 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 C3orf56Q8N813 242 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 Q9H8V8 135 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 TRBV7-3A0A075B6L6 115 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
CACNB3-209ENST00000548860 C10orf126Q8N4M7 172 aa10.48□□□□□ -0.73
CACNB3-209ENST00000548860 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
CACNB3-209ENST00000548860 RHODO00212 210 aa10.47□□□□□ -0.73
CACNB3-209ENST00000548860 PSMB8P28062 276 aa10.47□□□□□ -0.73
CACNB3-209ENST00000548860 TRBV7-9A0A0J9YWB2 115 aa10.47□□□□□ -0.73
CACNB3-209ENST00000548860 TSHBP01222 138 aa10.47□□□□□ -0.73
CACNB3-209ENST00000548860 ANAPC13Q9BS18 74 aa10.47□□□□□ -0.73
CACNB3-209ENST00000548860 MT-ATP8P03928 68 aa10.46□□□□□ -0.73
CACNB3-209ENST00000548860 PLA2G2AP14555 144 aa10.46□□□□□ -0.73
CACNB3-209ENST00000548860 LINC00467Q9BRT7 94 aa10.46□□□□□ -0.73
CACNB3-209ENST00000548860 HELZ2Q9BYK8 2649 aaKnown RBP10.46□□□□□ -0.73
CACNB3-209ENST00000548860 POLR2KP53803 58 aaKnown RBP10.46□□□□□ -0.73
CACNB3-209ENST00000548860 FOXI1Q12951 378 aa10.46□□□□□ -0.73
CACNB3-209ENST00000548860 PSMG3-AS1Q96PY0 264 aa10.46□□□□□ -0.73
CACNB3-209ENST00000548860 ZMAT4Q9H898 229 aa10.46□□□□□ -0.73
CACNB3-209ENST00000548860 IGLV4-3A0A075B6K6 122 aa10.46□□□□□ -0.74
CACNB3-209ENST00000548860 NXPH4O95158 308 aa10.46□□□□□ -0.74
CACNB3-209ENST00000548860 ZNF22P17026 224 aaPredicted RBP10.46□□□□□ -0.74
CACNB3-209ENST00000548860 TEX29Q8N6K0 151 aa10.46□□□□□ -0.74
CACNB3-209ENST00000548860 TMEM101Q96IK0 257 aa10.46□□□□□ -0.74
CACNB3-209ENST00000548860 PRORYQ9H606 182 aa10.46□□□□□ -0.74
CACNB3-209ENST00000548860 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.74
CACNB3-209ENST00000548860 KLLNB2CW77 178 aa10.45□□□□□ -0.74
CACNB3-209ENST00000548860 SOCS3O14543 225 aa10.45□□□□□ -0.74
CACNB3-209ENST00000548860 MORN3Q6PF18 240 aaPredicted RBP10.45□□□□□ -0.74
CACNB3-209ENST00000548860 H3BUA1 57 aa10.45□□□□□ -0.74
CACNB3-209ENST00000548860 ELANEP08246 267 aa10.45□□□□□ -0.74
CACNB3-209ENST00000548860 Q6ZTI0 123 aa10.45□□□□□ -0.74
CACNB3-209ENST00000548860 B5MCH6 92 aa10.45□□□□□ -0.74
CACNB3-209ENST00000548860 C5orf38Q86SI9 138 aa10.45□□□□□ -0.74
CACNB3-209ENST00000548860 WFDC11Q8NEX6 87 aa10.45□□□□□ -0.74
CACNB3-209ENST00000548860 Q6ZSN1 163 aa10.44□□□□□ -0.74
CACNB3-209ENST00000548860 COX8CQ7Z4L0 72 aa10.44□□□□□ -0.74
CACNB3-209ENST00000548860 PPDPFLQ8WWR9 84 aa10.44□□□□□ -0.74
CACNB3-209ENST00000548860 TRAV8-4A0A0B4J246 113 aa10.44□□□□□ -0.74
CACNB3-209ENST00000548860 IGLV1-40P01703 118 aa10.44□□□□□ -0.74
CACNB3-209ENST00000548860 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
CACNB3-209ENST00000548860 IGIPA6NJ69 53 aa10.43□□□□□ -0.74
CACNB3-209ENST00000548860 K7EMT4 169 aa10.43□□□□□ -0.74
CACNB3-209ENST00000548860 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.43□□□□□ -0.74
CACNB3-209ENST00000548860 H3BMM0 161 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms