RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 IGF2RP11717 2491 aa0.19□□□□□ -2.38
RPAP3-206ENST00000548296 PRDM2Q13029 1718 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 ZFYVE26Q68DK2 2539 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 TRAV13-2A0A0B4J235 113 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 FAM25AB3EWG3 89 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 FAM25CB3EWG5 89 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 FAM25GB3EWG6 89 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 MEIG1Q5JSS6 88 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 UBE2DNLQ8IWF7 75 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 NAA60Q9H7X0 242 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 DOCK1Q14185 1865 aa0.18□□□□□ -2.38
RPAP3-206ENST00000548296 STAB1Q9NY15 2570 aa0.17□□□□□ -2.38
RPAP3-206ENST00000548296 CCL18P55774 89 aa0.17□□□□□ -2.38
RPAP3-206ENST00000548296 RYR1P21817 5038 aa0.17□□□□□ -2.38
RPAP3-206ENST00000548296 BCL9LQ86UU0 1499 aa0.16□□□□□ -2.38
RPAP3-206ENST00000548296 NAIPQ13075 1403 aa0.16□□□□□ -2.38
RPAP3-206ENST00000548296 ASXL3Q9C0F0 2248 aa0.16□□□□□ -2.38
RPAP3-206ENST00000548296 RYR2Q92736 4967 aa0.16□□□□□ -2.38
RPAP3-206ENST00000548296 CACNA1AO00555 2505 aa0.16□□□□□ -2.38
RPAP3-206ENST00000548296 DOCK2Q92608 1830 aa0.15□□□□□ -2.38
RPAP3-206ENST00000548296 FGF7P21781 194 aa0.15□□□□□ -2.39
RPAP3-206ENST00000548296 RBM3P98179 157 aaKnown RBP0.15□□□□□ -2.39
RPAP3-206ENST00000548296 FAM213BQ8TBF2 198 aa0.15□□□□□ -2.39
RPAP3-206ENST00000548296 AQP10Q96PS8 301 aa0.15□□□□□ -2.39
RPAP3-206ENST00000548296 R4GMQ9 66 aa0.15□□□□□ -2.39
RPAP3-206ENST00000548296 ARAP2Q8WZ64 1704 aa0.15□□□□□ -2.39
RPAP3-206ENST00000548296 KIAA1109Q2LD37 5005 aa0.15□□□□□ -2.39
RPAP3-206ENST00000548296 MBD5Q9P267 1494 aa0.15□□□□□ -2.39
RPAP3-206ENST00000548296 ZNF815PA8K554 130 aa0.14□□□□□ -2.39
RPAP3-206ENST00000548296 Q56UQ5 140 aa0.14□□□□□ -2.39
RPAP3-206ENST00000548296 SSBP3-AS1Q7Z2R9 100 aa0.14□□□□□ -2.39
RPAP3-206ENST00000548296 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.14□□□□□ -2.39
RPAP3-206ENST00000548296 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
RPAP3-206ENST00000548296 PPIP5K1Q6PFW1 1433 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 PLXNB2O15031 1838 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 WNK3Q9BYP7 1800 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 MUC12Q9UKN1 5478 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 PI4KAP42356 2102 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 CACNA1CQ13936 2221 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 PPP1R17O96001 155 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 SPINK8P0C7L1 97 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 LENEPQ9Y5L5 61 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 NCOR2Q9Y618 2525 aa0.13□□□□□ -2.39
RPAP3-206ENST00000548296 RNF213Q63HN8 5207 aa0.12□□□□□ -2.39
RPAP3-206ENST00000548296 MRC1P22897 1456 aa0.12□□□□□ -2.39
RPAP3-206ENST00000548296 C10orf128Q5T292 105 aa0.12□□□□□ -2.39
RPAP3-206ENST00000548296 CFAP126Q5VTH2 177 aa0.12□□□□□ -2.39
RPAP3-206ENST00000548296 CNFNQ9BYD5 112 aa0.12□□□□□ -2.39
RPAP3-206ENST00000548296 ZNF609O15014 1411 aa0.12□□□□□ -2.39
RPAP3-206ENST00000548296 SONP18583 2426 aaKnown RBP0.12□□□□□ -2.39
RPAP3-206ENST00000548296 AHCTF1Q8WYP5 2266 aa0.11□□□□□ -2.39
RPAP3-206ENST00000548296 CHD9Q3L8U1 2897 aa0.11□□□□□ -2.39
RPAP3-206ENST00000548296 A0A0D9SFI3 127 aa0.11□□□□□ -2.39
RPAP3-206ENST00000548296 LOC100130705A0A1B0GUX0 176 aa0.11□□□□□ -2.39
RPAP3-206ENST00000548296 PPP3R2Q96LZ3 170 aa0.11□□□□□ -2.39
RPAP3-206ENST00000548296 KDM3BQ7LBC6 1761 aa0.11□□□□□ -2.39
RPAP3-206ENST00000548296 IGSF10Q6WRI0 2623 aa0.11□□□□□ -2.39
RPAP3-206ENST00000548296 HIVEP3Q5T1R4 2406 aa0.11□□□□□ -2.39
RPAP3-206ENST00000548296 HIVEP1P15822 2718 aa0.1□□□□□ -2.39
RPAP3-206ENST00000548296 TTC9CQ8N5M4 171 aa0.1□□□□□ -2.39
RPAP3-206ENST00000548296 CYP4F30PQ9H0H9 118 aa0.1□□□□□ -2.39
RPAP3-206ENST00000548296 NSD1Q96L73 2696 aaPredicted RBP0.1□□□□□ -2.39
RPAP3-206ENST00000548296 FAM208BQ5VWN6 2430 aa0.09□□□□□ -2.39
RPAP3-206ENST00000548296 EFCAB10A6NFE3 127 aa0.09□□□□□ -2.4
RPAP3-206ENST00000548296 M0R135 149 aa0.09□□□□□ -2.4
RPAP3-206ENST00000548296 APOC2P02655 101 aa0.09□□□□□ -2.4
RPAP3-206ENST00000548296 SMIM4Q8WVI0 70 aa0.09□□□□□ -2.4
RPAP3-206ENST00000548296 U3KQA8 63 aa0.09□□□□□ -2.4
RPAP3-206ENST00000548296 NCOR1O75376 2440 aa0.09□□□□□ -2.4
RPAP3-206ENST00000548296 SPAG11BQ08648 103 aa0.08□□□□□ -2.4
RPAP3-206ENST00000548296 SPAG11AQ6PDA7 123 aa0.08□□□□□ -2.4
RPAP3-206ENST00000548296 C8orf59Q8N0T1 100 aaPredicted RBP0.08□□□□□ -2.4
RPAP3-206ENST00000548296 SPANXDQ9BXN6 97 aa0.08□□□□□ -2.4
RPAP3-206ENST00000548296 QRICH2Q9H0J4 1663 aa0.08□□□□□ -2.4
RPAP3-206ENST00000548296 LRRC37A2A6NM11 1700 aa0.07□□□□□ -2.4
RPAP3-206ENST00000548296 BIVM-ERCC5R4GMW8 1640 aa0.07□□□□□ -2.4
RPAP3-206ENST00000548296 RPL13AP3Q6NVV1 102 aa0.07□□□□□ -2.4
RPAP3-206ENST00000548296 AMELXQ99217 191 aa0.07□□□□□ -2.4
RPAP3-206ENST00000548296 SCN3BQ9NY72 215 aa0.07□□□□□ -2.4
RPAP3-206ENST00000548296 CPSF1Q10570 1443 aaKnown RBP0.06□□□□□ -2.4
RPAP3-206ENST00000548296 MIF4GDA9UHW6 222 aaKnown RBP0.06□□□□□ -2.4
RPAP3-206ENST00000548296 PP6455Q8WZ26 134 aa0.06□□□□□ -2.4
RPAP3-206ENST00000548296 NPVFQ9HCQ7 196 aa0.06□□□□□ -2.4
RPAP3-206ENST00000548296 NALCNQ8IZF0 1738 aa0.06□□□□□ -2.4
RPAP3-206ENST00000548296 ZNF236Q9UL36 1845 aa0.06□□□□□ -2.4
RPAP3-206ENST00000548296 STAB2Q8WWQ8 2551 aa0.05□□□□□ -2.4
RPAP3-206ENST00000548296 A2ML1A8K2U0 1454 aa0.05□□□□□ -2.4
RPAP3-206ENST00000548296 CELSR1Q9NYQ6 3014 aa0.05□□□□□ -2.4
RPAP3-206ENST00000548296 CATR1Q13166 79 aa0.05□□□□□ -2.4
RPAP3-206ENST00000548296 KRTAP20-1Q3LI63 56 aa0.05□□□□□ -2.4
RPAP3-206ENST00000548296 MGST2Q99735 147 aa0.05□□□□□ -2.4
RPAP3-206ENST00000548296 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
RPAP3-206ENST00000548296 V9GYH0 126 aa0.05□□□□□ -2.4
RPAP3-206ENST00000548296 ROCK2O75116 1388 aaKnown RBP0.05□□□□□ -2.4
RPAP3-206ENST00000548296 RIF1Q5UIP0 2472 aaKnown RBP0.05□□□□□ -2.4
RPAP3-206ENST00000548296 HMCN2Q8NDA2 5059 aa0.05□□□□□ -2.4
RPAP3-206ENST00000548296 TRBV7-3A0A075B6L6 115 aa0.04□□□□□ -2.4
RPAP3-206ENST00000548296 CTXND1A0A1B0GTU2 59 aa0.04□□□□□ -2.4
RPAP3-206ENST00000548296 SSSCA1O60232 199 aa0.04□□□□□ -2.4
RPAP3-206ENST00000548296 IFNGP01579 166 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms