RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 TMEM89A2RUT3 159 aa15.2■□□□□ 0.02
BPTF-208ENST00000544778 C3orf84H3BNL1 204 aa15.2■□□□□ 0.02
BPTF-208ENST00000544778 PIK3CD-AS1Q5SR53 167 aa15.2■□□□□ 0.02
BPTF-208ENST00000544778 C9orf85Q96MD7 179 aa15.19■□□□□ 0.02
BPTF-208ENST00000544778 ENHOQ6UWT2 76 aa15.19■□□□□ 0.02
BPTF-208ENST00000544778 PTH2Q96A98 100 aa15.19■□□□□ 0.02
BPTF-208ENST00000544778 IGLV9-49A0A0B4J1Y8 123 aa15.19■□□□□ 0.02
BPTF-208ENST00000544778 RIF1Q5UIP0 2472 aaKnown RBP15.19■□□□□ 0.02
BPTF-208ENST00000544778 IGKV2-28A0A075B6P5 120 aa15.18■□□□□ 0.02
BPTF-208ENST00000544778 H3BT86 120 aa15.18■□□□□ 0.02
BPTF-208ENST00000544778 IGKV2D-28P01615 120 aa15.18■□□□□ 0.02
BPTF-208ENST00000544778 LYRM9A8MSI8 78 aa15.18■□□□□ 0.02
BPTF-208ENST00000544778 DSCAMO60469 2012 aa15.18■□□□□ 0.02
BPTF-208ENST00000544778 LINC00482Q8N8I6 264 aa15.18■□□□□ 0.02
BPTF-208ENST00000544778 LINC00467Q9BRT7 94 aa15.18■□□□□ 0.02
BPTF-208ENST00000544778 FREM1Q5H8C1 2179 aa15.18■□□□□ 0.02
BPTF-208ENST00000544778 MRPL55Q7Z7F7 128 aaKnown RBP15.18■□□□□ 0.02
BPTF-208ENST00000544778 HIST2H2BDQ6DRA6 164 aa15.17■□□□□ 0.02
BPTF-208ENST00000544778 E7EUB6 86 aa15.17■□□□□ 0.02
BPTF-208ENST00000544778 CTRLP40313 264 aa15.17■□□□□ 0.02
BPTF-208ENST00000544778 XAGE1AQ9HD64 81 aa15.17■□□□□ 0.02
BPTF-208ENST00000544778 A6NDX4 124 aa15.17■□□□□ 0.02
BPTF-208ENST00000544778 ODF1Q14990 250 aa15.17■□□□□ 0.02
BPTF-208ENST00000544778 TCL1BO95988 128 aa15.17■□□□□ 0.02
BPTF-208ENST00000544778 C20orf197Q8N268 126 aa15.16■□□□□ 0.02
BPTF-208ENST00000544778 C20orf203Q8NBC4 194 aa15.16■□□□□ 0.02
BPTF-208ENST00000544778 HIGD1BQ9P298 99 aa15.16■□□□□ 0.02
BPTF-208ENST00000544778 FAM167A-AS1Q96KT0 104 aa15.16■□□□□ 0.02
BPTF-208ENST00000544778 IGFL2Q6UWQ7 119 aa15.15■□□□□ 0.02
BPTF-208ENST00000544778 MED13LQ71F56 2210 aa15.15■□□□□ 0.02
BPTF-208ENST00000544778 UBE2D2P62837 147 aa15.14■□□□□ 0.01
BPTF-208ENST00000544778 A0A0J9YXY3 114 aa15.13■□□□□ 0.01
BPTF-208ENST00000544778 LINC00643Q86TS7 51 aa15.12■□□□□ 0.01
BPTF-208ENST00000544778 SMIM9A6NGZ8 99 aa15.12■□□□□ 0.01
BPTF-208ENST00000544778 CACNA1HO95180 2353 aa15.12■□□□□ 0.01
BPTF-208ENST00000544778 LY6LH3BQJ8 138 aa15.11■□□□□ 0.01
BPTF-208ENST00000544778 WNK1Q9H4A3 2382 aa15.11■□□□□ 0.01
BPTF-208ENST00000544778 ZNF706Q9Y5V0 76 aaPredicted RBP15.11■□□□□ 0.01
BPTF-208ENST00000544778 FAM236DA0A1B0GTK5 79 aa15.1■□□□□ 0.01
BPTF-208ENST00000544778 FAM236CP0DP71 79 aa15.1■□□□□ 0.01
BPTF-208ENST00000544778 RPL37AP8A6NKH3 93 aa15.1■□□□□ 0.01
BPTF-208ENST00000544778 NDUFC2-KCTD14E9PQ53 114 aa15.09■□□□□ 0.01
BPTF-208ENST00000544778 ODF3L1Q8IXM7 274 aa15.09■□□□□ 0.01
BPTF-208ENST00000544778 CCKP06307 115 aa15.09■□□□□ 0.01
BPTF-208ENST00000544778 WFDC13Q8IUB5 93 aa15.09■□□□□ 0.01
BPTF-208ENST00000544778 A6NED7 52 aa15.09■□□□□ 0.01
BPTF-208ENST00000544778 FAM240AA0A1B0GVK7 77 aa15.08■□□□□ 0.01
BPTF-208ENST00000544778 LOXL1Q08397 574 aaPredicted RBP15.08■□□□□ 0
BPTF-208ENST00000544778 KIAA1549LQ6ZVL6 1849 aa15.08■□□□□ 0
BPTF-208ENST00000544778 NDUFV3P56181 108 aaKnown RBP15.08■□□□□ 0
BPTF-208ENST00000544778 Q6YL49 198 aa15.08■□□□□ 0
BPTF-208ENST00000544778 LINC01548A6NM66 108 aa15.08■□□□□ 0
BPTF-208ENST00000544778 IGLC6P0CF74 106 aa15.07■□□□□ 0
BPTF-208ENST00000544778 G3V4G9 280 aa15.07■□□□□ 0
BPTF-208ENST00000544778 SHISA2Q6UWI4 295 aa15.07■□□□□ 0
BPTF-208ENST00000544778 TRAV10A0A0B4J240 114 aa15.07■□□□□ 0
BPTF-208ENST00000544778 SYCNQ0VAF6 134 aa15.07■□□□□ 0
BPTF-208ENST00000544778 Q6ZVQ6 151 aa15.07■□□□□ 0
BPTF-208ENST00000544778 H7C423 109 aa15.07■□□□□ 0
BPTF-208ENST00000544778 ZFAND3Q9H8U3 227 aa15.06■□□□□ 0
BPTF-208ENST00000544778 CEP192Q8TEP8 1941 aa15.06■□□□□ 0
BPTF-208ENST00000544778 DEFB114Q30KQ6 69 aa15.06■□□□□ 0
BPTF-208ENST00000544778 CCDC140Q96MF4 163 aa15.06■□□□□ 0
BPTF-208ENST00000544778 NEXN-AS1Q8NBZ9 246 aa15.05■□□□□ 0
BPTF-208ENST00000544778 IGF1P05019 195 aa15.05■□□□□ -0
BPTF-208ENST00000544778 SNURFQ9Y675 71 aa15.05■□□□□ -0
BPTF-208ENST00000544778 PLXNB1O43157 2135 aa15.05■□□□□ -0
BPTF-208ENST00000544778 MIFP14174 115 aa15.05■□□□□ -0
BPTF-208ENST00000544778 KRTAP27-1Q3LI81 207 aa15.05■□□□□ -0
BPTF-208ENST00000544778 LINC00526Q96FQ7 95 aa15.05■□□□□ -0
BPTF-208ENST00000544778 SPANXB1Q9NS25 103 aaPredicted RBP15.05■□□□□ -0
BPTF-208ENST00000544778 TNFRSF13BO14836 293 aaPredicted RBP15.04■□□□□ -0
BPTF-208ENST00000544778 IGF2-ASQ6U949 168 aa15.04■□□□□ -0
BPTF-208ENST00000544778 HCFC1P51610 2035 aa15.04■□□□□ -0
BPTF-208ENST00000544778 PRR4Q16378 134 aa15.04■□□□□ -0
BPTF-208ENST00000544778 TRBV6-8A0A0A6YYG3 113 aa15.04■□□□□ -0
BPTF-208ENST00000544778 IGLV1-47P01700 117 aa15.04■□□□□ -0
BPTF-208ENST00000544778 X6R8D5 127 aa15.04■□□□□ -0
BPTF-208ENST00000544778 FAM30AQ9NZY2 134 aa15.03■□□□□ -0
BPTF-208ENST00000544778 PLAC8L1A1L4L8 177 aa15.03■□□□□ -0
BPTF-208ENST00000544778 CDKN2A-AS1Q9UH64 79 aa15.03■□□□□ -0
BPTF-208ENST00000544778 ZNF80P51504 273 aaPredicted RBP15.03■□□□□ -0
BPTF-208ENST00000544778 LINC00322Q6ZN03 302 aaPredicted RBP15.02■□□□□ -0
BPTF-208ENST00000544778 Q8N9L7 120 aa15.02■□□□□ -0
BPTF-208ENST00000544778 PRR14LQ5THK1 2151 aa15.02■□□□□ -0
BPTF-208ENST00000544778 C20orf173Q96LM9 149 aa15.02■□□□□ -0
BPTF-208ENST00000544778 BBC3Q96PG8 261 aaPredicted RBP15.01□□□□□ -0.01
BPTF-208ENST00000544778 LY6G6DO95868 133 aa15.01□□□□□ -0.01
BPTF-208ENST00000544778 C19orf84I3L1E1 186 aa15□□□□□ -0.01
BPTF-208ENST00000544778 PROK1P58294 105 aa15□□□□□ -0.01
BPTF-208ENST00000544778 CFAP126Q5VTH2 177 aa15□□□□□ -0.01
BPTF-208ENST00000544778 C6orf99Q4VX62 202 aa15□□□□□ -0.01
BPTF-208ENST00000544778 FRMD6-AS1P0C7T7 363 aa15□□□□□ -0.01
BPTF-208ENST00000544778 SPATA12Q7Z6I5 190 aa15□□□□□ -0.01
BPTF-208ENST00000544778 ARHGAP32A7KAX9 2087 aa14.99□□□□□ -0.01
BPTF-208ENST00000544778 COA6Q5JTJ3 125 aaKnown RBP14.99□□□□□ -0.01
BPTF-208ENST00000544778 V9GYY9 64 aa14.99□□□□□ -0.01
BPTF-208ENST00000544778 PLA2G2EQ9NZK7 142 aa14.99□□□□□ -0.01
BPTF-208ENST00000544778 Q8N976 141 aa14.99□□□□□ -0.01
BPTF-208ENST00000544778 KPRPQ5T749 579 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms