RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 CSDC2Q9Y534 153 aaKnown RBP5.72□□□□□ -1.49
TRIM59-208ENST00000543469 CSNK1G2-AS1Q8NCQ2 148 aa5.72□□□□□ -1.49
TRIM59-208ENST00000543469 JPT2Q9H910 190 aa5.72□□□□□ -1.49
TRIM59-208ENST00000543469 F8WDY8 70 aa5.71□□□□□ -1.49
TRIM59-208ENST00000543469 KIF25-AS1Q9Y6Z4 181 aa5.71□□□□□ -1.49
TRIM59-208ENST00000543469 DSPP15924 2871 aaKnown RBP5.71□□□□□ -1.49
TRIM59-208ENST00000543469 LINC01546A6NGU7 62 aa5.71□□□□□ -1.5
TRIM59-208ENST00000543469 LURAP1LQ8IV03 231 aa5.71□□□□□ -1.5
TRIM59-208ENST00000543469 LINC00518Q8N0U6 118 aa5.71□□□□□ -1.5
TRIM59-208ENST00000543469 VSIG2Q96IQ7 327 aa5.71□□□□□ -1.5
TRIM59-208ENST00000543469 LBHQ53QV2 105 aaPredicted RBP5.71□□□□□ -1.5
TRIM59-208ENST00000543469 LOC105371267A0A1B0GV96 52 aa5.71□□□□□ -1.5
TRIM59-208ENST00000543469 GHRHP01286 108 aa5.71□□□□□ -1.5
TRIM59-208ENST00000543469 LINC00612Q8N6U2 182 aa5.71□□□□□ -1.5
TRIM59-208ENST00000543469 TRAV13-1A0A0B4J241 112 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 TINCRA0A1B0GVN0 87 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 IGLL5B9A064 214 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 Q8NAQ8 132 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 HECTD1Q9ULT8 2610 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 LAMA1P25391 3075 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 UNC79Q9P2D8 2635 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 PRSS29PA6NIE9 313 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 C11orf86A6NJI1 115 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 SIVA1O15304 175 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 C6orf226Q5I0X4 101 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 ZNF561-AS1K7EIQ3 104 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 LEPROTO15243 131 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 DEFB4AO15263 64 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 LINC01561Q8N1V8 128 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 MUC7Q8TAX7 377 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 CST9LQ9H4G1 147 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 TSHBP01222 138 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 RBMY1A1P0DJD3 496 aaKnown RBP5.7□□□□□ -1.5
TRIM59-208ENST00000543469 RBMY1CP0DJD4 496 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 RPL24P83731 157 aaKnown RBP5.7□□□□□ -1.5
TRIM59-208ENST00000543469 RBMY1FQ15415 496 aaKnown RBP5.7□□□□□ -1.5
TRIM59-208ENST00000543469 MIAQ16674 131 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 HIST1H4GQ99525 98 aa5.7□□□□□ -1.5
TRIM59-208ENST00000543469 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.69□□□□□ -1.5
TRIM59-208ENST00000543469 IGKV2-29A2NJV5 120 aaPredicted RBP5.69□□□□□ -1.5
TRIM59-208ENST00000543469 COX7A2LO14548 114 aa5.69□□□□□ -1.5
TRIM59-208ENST00000543469 TAL2Q16559 108 aa5.69□□□□□ -1.5
TRIM59-208ENST00000543469 Q6ZVH6 145 aa5.69□□□□□ -1.5
TRIM59-208ENST00000543469 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.69□□□□□ -1.5
TRIM59-208ENST00000543469 ZC2HC1BQ5TFG8 222 aa5.69□□□□□ -1.5
TRIM59-208ENST00000543469 TM2D3Q9BRN9 247 aa5.69□□□□□ -1.5
TRIM59-208ENST00000543469 PRRC2CQ9Y520 2896 aaKnown RBP5.69□□□□□ -1.5
TRIM59-208ENST00000543469 ZNF815PA8K554 130 aa5.69□□□□□ -1.5
TRIM59-208ENST00000543469 COX6CP09669 75 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 HSD52Q0P140 79 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 BAALCQ8WXS3 180 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 RAB37Q96AX2 223 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 TOMM7Q9P0U1 55 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 CHD6Q8TD26 2715 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 KRTAP10-11P60412 298 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 A0A1B0GUV1 79 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 FLNAP21333 2647 aaKnown RBP5.68□□□□□ -1.5
TRIM59-208ENST00000543469 CFAP46Q8IYW2 2715 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 BATFQ16520 125 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 Q1RN00 199 aa5.68□□□□□ -1.5
TRIM59-208ENST00000543469 MRPL35Q9NZE8 188 aaKnown RBP5.68□□□□□ -1.5
TRIM59-208ENST00000543469 K7EIL1 84 aa5.67□□□□□ -1.5
TRIM59-208ENST00000543469 DMXL1Q9Y485 3027 aa5.67□□□□□ -1.5
TRIM59-208ENST00000543469 UBE2WQ96B02 151 aa5.67□□□□□ -1.5
TRIM59-208ENST00000543469 TLN2Q9Y4G6 2542 aa5.67□□□□□ -1.5
TRIM59-208ENST00000543469 NANOS2P60321 138 aaKnown RBP5.67□□□□□ -1.5
TRIM59-208ENST00000543469 ITPR3Q14573 2671 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 DLEU1O43261 78 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 C12orf74Q32Q52 190 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 IGLC3P0DOY3 106 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 HINT1P49773 126 aaPredicted RBP5.66□□□□□ -1.5
TRIM59-208ENST00000543469 A0A096LPF7 62 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 IFITM1P13164 125 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 DDTP30046 118 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 LINC00315P59091 139 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 Q6ZQT7 251 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 SBSPONQ8IVN8 264 aa5.66□□□□□ -1.5
TRIM59-208ENST00000543469 IGLV4-3A0A075B6K6 122 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 IGKV2D-24A0A075B6R9 120 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 IGHV1-58A0A0C4DH39 117 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 REG3AQ06141 175 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 CEMP1Q6PRD7 247 aaPredicted RBP5.65□□□□□ -1.5
TRIM59-208ENST00000543469 UBE2D4Q9Y2X8 147 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 SORL1Q92673 2214 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 EYSQ5T1H1 3165 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 PRO1933Q9H354 126 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 RETNQ9HD89 108 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 CFAP54Q96N23 3096 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 ACANP16112 2415 aa5.65□□□□□ -1.5
TRIM59-208ENST00000543469 J3QQQ9 107 aa5.65□□□□□ -1.51
TRIM59-208ENST00000543469 COX8AP10176 69 aa5.65□□□□□ -1.51
TRIM59-208ENST00000543469 ODF1Q14990 250 aa5.65□□□□□ -1.51
TRIM59-208ENST00000543469 COL5A1-AS1Q5SY13 56 aa5.65□□□□□ -1.51
TRIM59-208ENST00000543469 E9PLD3 99 aa5.65□□□□□ -1.51
TRIM59-208ENST00000543469 GIG44P09565 113 aaPredicted RBP5.65□□□□□ -1.51
TRIM59-208ENST00000543469 Q6ZTC4 211 aa5.65□□□□□ -1.51
TRIM59-208ENST00000543469 ATOH7Q8N100 152 aa5.65□□□□□ -1.51
TRIM59-208ENST00000543469 VAMP3Q15836 100 aa5.64□□□□□ -1.51
TRIM59-208ENST00000543469 MDFIQ99750 246 aa5.64□□□□□ -1.51
TRIM59-208ENST00000543469 IGLV2-18A0A075B6J9 118 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms