RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PYGO1Q9Y3Y4 419 aa10.15□□□□□ -0.78
LDB3-207ENST00000542786 SEC11AP67812 179 aa10.15□□□□□ -0.79
LDB3-207ENST00000542786 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.15□□□□□ -0.79
LDB3-207ENST00000542786 ZNRF2Q8NHG8 242 aa10.15□□□□□ -0.79
LDB3-207ENST00000542786 ZNF479Q96JC4 524 aa10.15□□□□□ -0.79
LDB3-207ENST00000542786 CITED1Q99966 193 aa10.15□□□□□ -0.79
LDB3-207ENST00000542786 C1QTNF4Q9BXJ3 329 aa10.15□□□□□ -0.79
LDB3-207ENST00000542786 NFE4Q86UQ8 179 aa10.14□□□□□ -0.79
LDB3-207ENST00000542786 CHAC1Q9BUX1 264 aa10.14□□□□□ -0.79
LDB3-207ENST00000542786 TRAV8-6A0A0B4J262 113 aa10.13□□□□□ -0.79
LDB3-207ENST00000542786 TRAV4A0A0B4J268 109 aa10.13□□□□□ -0.79
LDB3-207ENST00000542786 PAPPA-AS1Q5QFB9 102 aa10.13□□□□□ -0.79
LDB3-207ENST00000542786 OR4C5Q8NGB2 326 aa10.13□□□□□ -0.79
LDB3-207ENST00000542786 C16orf74Q96GX8 76 aa10.13□□□□□ -0.79
LDB3-207ENST00000542786 OVOL2Q9BRP0 275 aa10.13□□□□□ -0.79
LDB3-207ENST00000542786 EMP1P54849 157 aa10.13□□□□□ -0.79
LDB3-207ENST00000542786 AMELXQ99217 191 aa10.13□□□□□ -0.79
LDB3-207ENST00000542786 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
LDB3-207ENST00000542786 NPSP0C0P6 89 aa10.12□□□□□ -0.79
LDB3-207ENST00000542786 INSL3P51460 131 aa10.12□□□□□ -0.79
LDB3-207ENST00000542786 OR11H2Q8NH07 326 aa10.12□□□□□ -0.79
LDB3-207ENST00000542786 NOP10Q9NPE3 64 aaKnown RBP10.12□□□□□ -0.79
LDB3-207ENST00000542786 TENM1Q9UKZ4 2725 aa10.11□□□□□ -0.79
LDB3-207ENST00000542786 MYMXA0A1B0GTQ4 84 aa10.1□□□□□ -0.79
LDB3-207ENST00000542786 CRYBA4P53673 196 aa10.1□□□□□ -0.79
LDB3-207ENST00000542786 VWFP04275 2813 aa10.1□□□□□ -0.79
LDB3-207ENST00000542786 TRBV10-1A0A0K0K1A3 114 aa10.1□□□□□ -0.79
LDB3-207ENST00000542786 C9orf66Q5T8R8 295 aa10.1□□□□□ -0.79
LDB3-207ENST00000542786 TM2D2Q9BX73 214 aa10.1□□□□□ -0.79
LDB3-207ENST00000542786 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
LDB3-207ENST00000542786 UBE2D4Q9Y2X8 147 aa10.1□□□□□ -0.79
LDB3-207ENST00000542786 IGHV3-38A0A0C4DH36 116 aa10.09□□□□□ -0.79
LDB3-207ENST00000542786 K7EQD1 137 aa10.09□□□□□ -0.79
LDB3-207ENST00000542786 FXYD2P54710 66 aa10.09□□□□□ -0.79
LDB3-207ENST00000542786 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
LDB3-207ENST00000542786 RRN3P1Q2M238 152 aa10.09□□□□□ -0.79
LDB3-207ENST00000542786 NOTCH3Q9UM47 2321 aa10.09□□□□□ -0.79
LDB3-207ENST00000542786 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
LDB3-207ENST00000542786 K7EP13 123 aa10.08□□□□□ -0.8
LDB3-207ENST00000542786 CEMP1Q6PRD7 247 aaPredicted RBP10.08□□□□□ -0.8
LDB3-207ENST00000542786 PHLDA1Q8WV24 401 aaPredicted RBP10.08□□□□□ -0.8
LDB3-207ENST00000542786 UBE2D3P61077 147 aa10.08□□□□□ -0.8
LDB3-207ENST00000542786 UBE2D2P62837 147 aa10.08□□□□□ -0.8
LDB3-207ENST00000542786 COTL1Q14019 142 aa10.08□□□□□ -0.8
LDB3-207ENST00000542786 TAL2Q16559 108 aa10.08□□□□□ -0.8
LDB3-207ENST00000542786 SLC25A29Q8N8R3 303 aa10.08□□□□□ -0.8
LDB3-207ENST00000542786 VCX2Q9H322 139 aa10.08□□□□□ -0.8
LDB3-207ENST00000542786 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
LDB3-207ENST00000542786 A0A0J9YXV3 536 aa10.07□□□□□ -0.8
LDB3-207ENST00000542786 TMEM223A0PJW6 202 aa10.07□□□□□ -0.8
LDB3-207ENST00000542786 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
LDB3-207ENST00000542786 ZNF22P17026 224 aaPredicted RBP10.07□□□□□ -0.8
LDB3-207ENST00000542786 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
LDB3-207ENST00000542786 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 A6NDN8 102 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 H3BRM9 83 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 GAGE7O76087 117 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 MRPS36P82909 103 aaKnown RBP10.06□□□□□ -0.8
LDB3-207ENST00000542786 CEND1Q8N111 149 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 TIMM21Q9BVV7 248 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 HERVK_113P61574 105 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 TMEM170BQ5T4T1 132 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 NTM-AS1Q6ZSK4 140 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 Q6ZUT4 128 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 SBSPONQ8IVN8 264 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 WFDC9Q8NEX5 89 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 X6R8D5 127 aa10.06□□□□□ -0.8
LDB3-207ENST00000542786 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
LDB3-207ENST00000542786 CCL25O15444 150 aa10.05□□□□□ -0.8
LDB3-207ENST00000542786 WIPF1O43516 503 aa10.05□□□□□ -0.8
LDB3-207ENST00000542786 CIDEAO60543 219 aa10.05□□□□□ -0.8
LDB3-207ENST00000542786 GCSHP23434 173 aa10.05□□□□□ -0.8
LDB3-207ENST00000542786 LINC00694P0DN24 101 aa10.04□□□□□ -0.8
LDB3-207ENST00000542786 RPL36AP83881 106 aaKnown RBP10.04□□□□□ -0.8
LDB3-207ENST00000542786 RPL36ALQ969Q0 106 aaKnown RBP10.04□□□□□ -0.8
LDB3-207ENST00000542786 TRBV6-4A0A1B0GX49 114 aa10.04□□□□□ -0.8
LDB3-207ENST00000542786 UBE2V1Q13404 147 aa10.04□□□□□ -0.8
LDB3-207ENST00000542786 FHL2Q14192 279 aa10.04□□□□□ -0.8
LDB3-207ENST00000542786 DAZ4Q86SG3 579 aaKnown RBP10.04□□□□□ -0.8
LDB3-207ENST00000542786 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
LDB3-207ENST00000542786 DAZ3Q9NR90 486 aaKnown RBP10.04□□□□□ -0.8
LDB3-207ENST00000542786 F8P00451 2351 aa10.04□□□□□ -0.8
LDB3-207ENST00000542786 C9orf118A6NHY6 69 aa10.03□□□□□ -0.8
LDB3-207ENST00000542786 CYSRT1A8MQ03 144 aa10.03□□□□□ -0.8
LDB3-207ENST00000542786 RNASE13Q5GAN3 156 aaKnown RBP10.03□□□□□ -0.8
LDB3-207ENST00000542786 ATRQ13535 2644 aa10.02□□□□□ -0.8
LDB3-207ENST00000542786 TRGV2A0A075B6R0 118 aa10.02□□□□□ -0.8
LDB3-207ENST00000542786 GAGE12JA6NER3 117 aa10.02□□□□□ -0.8
LDB3-207ENST00000542786 LEPROTO15243 131 aa10.02□□□□□ -0.8
LDB3-207ENST00000542786 GAGE4Q13068 117 aa10.02□□□□□ -0.8
LDB3-207ENST00000542786 GAGE5Q13069 117 aa10.02□□□□□ -0.8
LDB3-207ENST00000542786 GAGE13Q4V321 117 aa10.02□□□□□ -0.8
LDB3-207ENST00000542786 KIR2DL5BQ8NHK3 375 aa10.02□□□□□ -0.8
LDB3-207ENST00000542786 TEP1Q99973 2627 aaKnown RBP10.02□□□□□ -0.81
LDB3-207ENST00000542786 A0A0J9YY99 117 aa10.02□□□□□ -0.81
LDB3-207ENST00000542786 LOC100131303A0A0U1RQF7 123 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms