RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 RAB19A4D1S5 217 aa15.33■□□□□ 0.04
LEMD3-203ENST00000541171 IGLC6P0CF74 106 aa15.33■□□□□ 0.04
LEMD3-203ENST00000541171 TMEM243Q9BU79 118 aa15.33■□□□□ 0.04
LEMD3-203ENST00000541171 TRAV8-4A0A0B4J246 113 aa15.32■□□□□ 0.04
LEMD3-203ENST00000541171 P01737 135 aa15.32■□□□□ 0.04
LEMD3-203ENST00000541171 RPS20P60866 119 aaKnown RBP15.32■□□□□ 0.04
LEMD3-203ENST00000541171 CNBPP62633 177 aaKnown RBP15.32■□□□□ 0.04
LEMD3-203ENST00000541171 CACNG7P62955 275 aa15.32■□□□□ 0.04
LEMD3-203ENST00000541171 GFRA4Q9GZZ7 299 aa15.32■□□□□ 0.04
LEMD3-203ENST00000541171 AP5S1Q9NUS5 200 aa15.32■□□□□ 0.04
LEMD3-203ENST00000541171 C19orf71A6NCJ1 209 aa15.31■□□□□ 0.04
LEMD3-203ENST00000541171 RASL11AQ6T310 242 aa15.31■□□□□ 0.04
LEMD3-203ENST00000541171 IGHV3-64A0A075B6Q5 118 aa15.3■□□□□ 0.04
LEMD3-203ENST00000541171 TEX261Q6UWH6 196 aa15.3■□□□□ 0.04
LEMD3-203ENST00000541171 FAM210AQ96ND0 272 aa15.3■□□□□ 0.04
LEMD3-203ENST00000541171 A0A1B0GUV1 79 aa15.29■□□□□ 0.04
LEMD3-203ENST00000541171 CHTF8P0CG12 524 aa15.29■□□□□ 0.04
LEMD3-203ENST00000541171 UBE2L6O14933 153 aa15.28■□□□□ 0.04
LEMD3-203ENST00000541171 SLPIP03973 132 aa15.28■□□□□ 0.04
LEMD3-203ENST00000541171 CIRBPQ14011 172 aaKnown RBP15.28■□□□□ 0.04
LEMD3-203ENST00000541171 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.27■□□□□ 0.04
LEMD3-203ENST00000541171 LYZL1Q6UWQ5 148 aa15.27■□□□□ 0.04
LEMD3-203ENST00000541171 EIF5A2Q9GZV4 153 aaKnown RBP15.27■□□□□ 0.04
LEMD3-203ENST00000541171 NIT2Q9NQR4 276 aa15.27■□□□□ 0.04
LEMD3-203ENST00000541171 A0A087WYN8 130 aa15.26■□□□□ 0.03
LEMD3-203ENST00000541171 XKRY2A2RUG3 117 aa15.26■□□□□ 0.03
LEMD3-203ENST00000541171 F2Z2F3 143 aa15.26■□□□□ 0.03
LEMD3-203ENST00000541171 TRGC1P0CF51 173 aa15.26■□□□□ 0.03
LEMD3-203ENST00000541171 MT1HL1P0DM35 61 aa15.26■□□□□ 0.03
LEMD3-203ENST00000541171 Q6ZRU5 148 aa15.26■□□□□ 0.03
LEMD3-203ENST00000541171 DPH3P1Q9H4G8 78 aa15.26■□□□□ 0.03
LEMD3-203ENST00000541171 IGKV3OR2-268A0A0C4DH90 116 aa15.25■□□□□ 0.03
LEMD3-203ENST00000541171 NTF3P20783 257 aa15.25■□□□□ 0.03
LEMD3-203ENST00000541171 AMTP48728 403 aa15.25■□□□□ 0.03
LEMD3-203ENST00000541171 WDR73Q6P4I2 378 aa15.25■□□□□ 0.03
LEMD3-203ENST00000541171 PGLYRP4Q96LB8 373 aa15.25■□□□□ 0.03
LEMD3-203ENST00000541171 COTL1Q14019 142 aa15.24■□□□□ 0.03
LEMD3-203ENST00000541171 GAGE12HA6NDE8 117 aa15.23■□□□□ 0.03
LEMD3-203ENST00000541171 K7EN84 100 aa15.22■□□□□ 0.03
LEMD3-203ENST00000541171 OCC1Q8TAD7 63 aa15.22■□□□□ 0.03
LEMD3-203ENST00000541171 SPACA4Q8TDM5 124 aa15.22■□□□□ 0.03
LEMD3-203ENST00000541171 RNF185Q96GF1 192 aa15.22■□□□□ 0.03
LEMD3-203ENST00000541171 SRP19P09132 144 aaKnown RBP15.2■□□□□ 0.02
LEMD3-203ENST00000541171 C15orf56Q8N910 161 aa15.2■□□□□ 0.02
LEMD3-203ENST00000541171 NUDT10Q8NFP7 164 aa15.2■□□□□ 0.02
LEMD3-203ENST00000541171 NUDT11Q96G61 164 aa15.2■□□□□ 0.02
LEMD3-203ENST00000541171 SMIM7Q9BQ49 75 aa15.2■□□□□ 0.02
LEMD3-203ENST00000541171 RPP21Q9H633 154 aaKnown RBP15.2■□□□□ 0.02
LEMD3-203ENST00000541171 CEBPGP53567 150 aa15.19■□□□□ 0.02
LEMD3-203ENST00000541171 TWIST1Q15672 202 aa15.19■□□□□ 0.02
LEMD3-203ENST00000541171 HIGD2BQ4VC39 106 aa15.19■□□□□ 0.02
LEMD3-203ENST00000541171 CFAP161Q6P656 301 aa15.19■□□□□ 0.02
LEMD3-203ENST00000541171 FAM231DQ6ZW35 169 aa15.19■□□□□ 0.02
LEMD3-203ENST00000541171 TRAV26-2A0A0B4J265 109 aa15.18■□□□□ 0.02
LEMD3-203ENST00000541171 PHOX2AO14813 284 aa15.18■□□□□ 0.02
LEMD3-203ENST00000541171 COX6A2Q02221 97 aa15.18■□□□□ 0.02
LEMD3-203ENST00000541171 SMDT1Q9H4I9 107 aa15.18■□□□□ 0.02
LEMD3-203ENST00000541171 CTRLP40313 264 aa15.17■□□□□ 0.02
LEMD3-203ENST00000541171 GATD1Q8NB37 220 aa15.17■□□□□ 0.02
LEMD3-203ENST00000541171 RNASE7Q9H1E1 156 aaKnown RBP15.17■□□□□ 0.02
LEMD3-203ENST00000541171 PLAC8Q9NZF1 115 aa15.17■□□□□ 0.02
LEMD3-203ENST00000541171 ZNF727A8MUV8 499 aa15.16■□□□□ 0.02
LEMD3-203ENST00000541171 RPS10P46783 165 aaKnown RBP15.16■□□□□ 0.02
LEMD3-203ENST00000541171 AMMECR1LQ6DCA0 310 aa15.16■□□□□ 0.02
LEMD3-203ENST00000541171 LINC01551Q86U37 167 aa15.16■□□□□ 0.02
LEMD3-203ENST00000541171 C7orf33Q8WU49 177 aa15.16■□□□□ 0.02
LEMD3-203ENST00000541171 IGKV2-24A0A0C4DH68 120 aa15.15■□□□□ 0.02
LEMD3-203ENST00000541171 MAJINQ3KP22 176 aa15.15■□□□□ 0.02
LEMD3-203ENST00000541171 FAM74A3Q4VXF1 159 aa15.15■□□□□ 0.02
LEMD3-203ENST00000541171 CNFNQ9BYD5 112 aa15.15■□□□□ 0.02
LEMD3-203ENST00000541171 PEA15Q15121 130 aa15.14■□□□□ 0.01
LEMD3-203ENST00000541171 CT83Q5H943 113 aa15.14■□□□□ 0.01
LEMD3-203ENST00000541171 RNASEKQ6P5S7 137 aaKnown RBP15.14■□□□□ 0.01
LEMD3-203ENST00000541171 PRSS3P2Q8NHM4 247 aa15.14■□□□□ 0.01
LEMD3-203ENST00000541171 GTSF1Q8WW33 167 aa15.14■□□□□ 0.01
LEMD3-203ENST00000541171 CHCHD10Q8WYQ3 142 aaPredicted RBP15.14■□□□□ 0.01
LEMD3-203ENST00000541171 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.13■□□□□ 0.01
LEMD3-203ENST00000541171 IGKV2-29A2NJV5 120 aaPredicted RBP15.13■□□□□ 0.01
LEMD3-203ENST00000541171 RPL39LQ96EH5 51 aaKnown RBP15.13■□□□□ 0.01
LEMD3-203ENST00000541171 GATCO43716 136 aaKnown RBP15.12■□□□□ 0.01
LEMD3-203ENST00000541171 A8MWL6 223 aa15.1■□□□□ 0.01
LEMD3-203ENST00000541171 APCSP02743 223 aa15.1■□□□□ 0.01
LEMD3-203ENST00000541171 FOXA3P55318 350 aaPredicted RBP15.1■□□□□ 0.01
LEMD3-203ENST00000541171 STPG4Q8N801 248 aa15.1■□□□□ 0.01
LEMD3-203ENST00000541171 C9JQL5 133 aa15.09■□□□□ 0.01
LEMD3-203ENST00000541171 SMIM15Q7Z3B0 74 aa15.09■□□□□ 0.01
LEMD3-203ENST00000541171 OSTCQ9NRP0 149 aa15.09■□□□□ 0.01
LEMD3-203ENST00000541171 NCR2O95944 276 aa15.08■□□□□ 0
LEMD3-203ENST00000541171 FGF6P10767 208 aa15.08■□□□□ 0
LEMD3-203ENST00000541171 RAB14P61106 215 aa15.08■□□□□ 0
LEMD3-203ENST00000541171 TMEM241Q24JQ0 296 aa15.08■□□□□ 0
LEMD3-203ENST00000541171 SRSF3P84103 164 aaKnown RBP15.07■□□□□ 0
LEMD3-203ENST00000541171 GVQW2A0A096LPI5 108 aaPredicted RBP15.06■□□□□ 0
LEMD3-203ENST00000541171 SDHAF1A6NFY7 115 aa15.06■□□□□ 0
LEMD3-203ENST00000541171 H7C423 109 aa15.06■□□□□ 0
LEMD3-203ENST00000541171 ISOC2Q96AB3 205 aa15.06■□□□□ 0
LEMD3-203ENST00000541171 NAT8Q9UHE5 227 aa15.06■□□□□ 0
LEMD3-203ENST00000541171 A0A096LNI7 61 aa15.05■□□□□ -0
LEMD3-203ENST00000541171 FAM231BA6NCW3 169 aa15.05■□□□□ -0
LEMD3-203ENST00000541171 PMCHP20382 165 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms