RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 CEMP1Q6PRD7 247 aaPredicted RBP11.31□□□□□ -0.6
GABARAPL1-208ENST00000540424 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
GABARAPL1-208ENST00000540424 TIMM17AQ99595 171 aa11.31□□□□□ -0.6
GABARAPL1-208ENST00000540424 COX6CP09669 75 aa11.3□□□□□ -0.6
GABARAPL1-208ENST00000540424 S100A4P26447 101 aaKnown RBP11.3□□□□□ -0.6
GABARAPL1-208ENST00000540424 ZNF876PQ49A33 203 aa11.3□□□□□ -0.6
GABARAPL1-208ENST00000540424 ICOSQ9Y6W8 199 aa11.3□□□□□ -0.6
GABARAPL1-208ENST00000540424 MYO18BQ8IUG5 2567 aa11.3□□□□□ -0.6
GABARAPL1-208ENST00000540424 PRR9Q5T870 116 aa11.3□□□□□ -0.6
GABARAPL1-208ENST00000540424 ZNRF2Q8NHG8 242 aa11.3□□□□□ -0.6
GABARAPL1-208ENST00000540424 TP53TG1Q9Y2A0 90 aa11.3□□□□□ -0.6
GABARAPL1-208ENST00000540424 SDHAF1A6NFY7 115 aa11.29□□□□□ -0.6
GABARAPL1-208ENST00000540424 COX7CP15954 63 aa11.29□□□□□ -0.6
GABARAPL1-208ENST00000540424 LINC00643Q86TS7 51 aa11.29□□□□□ -0.6
GABARAPL1-208ENST00000540424 APRG1Q8IVJ8 170 aa11.29□□□□□ -0.6
GABARAPL1-208ENST00000540424 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
GABARAPL1-208ENST00000540424 AKAP6Q13023 2319 aa11.29□□□□□ -0.6
GABARAPL1-208ENST00000540424 CRYGAP11844 174 aa11.29□□□□□ -0.6
GABARAPL1-208ENST00000540424 ZNF22P17026 224 aaPredicted RBP11.29□□□□□ -0.6
GABARAPL1-208ENST00000540424 LST1O00453 97 aa11.28□□□□□ -0.6
GABARAPL1-208ENST00000540424 PSMB8P28062 276 aa11.28□□□□□ -0.6
GABARAPL1-208ENST00000540424 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
GABARAPL1-208ENST00000540424 ZNF256Q9Y2P7 627 aaPredicted RBP11.27□□□□□ -0.6
GABARAPL1-208ENST00000540424 KLK5Q9Y337 293 aaPredicted RBP11.27□□□□□ -0.6
GABARAPL1-208ENST00000540424 PHLDA3Q9Y5J5 127 aa11.27□□□□□ -0.6
GABARAPL1-208ENST00000540424 IGHV4-59P01825 116 aa11.27□□□□□ -0.61
GABARAPL1-208ENST00000540424 CXCL5P42830 114 aa11.27□□□□□ -0.61
GABARAPL1-208ENST00000540424 GAGE2AQ6NT46 116 aa11.27□□□□□ -0.61
GABARAPL1-208ENST00000540424 RNASE4P34096 147 aaKnown RBP11.26□□□□□ -0.61
GABARAPL1-208ENST00000540424 EDA2RQ9HAV5 297 aa11.26□□□□□ -0.61
GABARAPL1-208ENST00000540424 IGKV3-7A0A075B6H7 116 aa11.25□□□□□ -0.61
GABARAPL1-208ENST00000540424 MGPP08493 103 aa11.25□□□□□ -0.61
GABARAPL1-208ENST00000540424 CSMD1Q96PZ7 3565 aa11.25□□□□□ -0.61
GABARAPL1-208ENST00000540424 HELZ2Q9BYK8 2649 aaKnown RBP11.25□□□□□ -0.61
GABARAPL1-208ENST00000540424 C5orf38Q86SI9 138 aa11.24□□□□□ -0.61
GABARAPL1-208ENST00000540424 C2orf48Q96LS8 159 aa11.24□□□□□ -0.61
GABARAPL1-208ENST00000540424 A0A096LNT2 108 aa11.24□□□□□ -0.61
GABARAPL1-208ENST00000540424 F6UB75 175 aa11.24□□□□□ -0.61
GABARAPL1-208ENST00000540424 SDIM1Q6ZPB5 146 aa11.24□□□□□ -0.61
GABARAPL1-208ENST00000540424 ASH1LQ9NR48 2969 aaKnown RBP11.23□□□□□ -0.61
GABARAPL1-208ENST00000540424 A0A0J9YXY3 114 aa11.23□□□□□ -0.61
GABARAPL1-208ENST00000540424 DOPEY1Q5JWR5 2465 aa11.23□□□□□ -0.61
GABARAPL1-208ENST00000540424 FLNCQ14315 2725 aa11.23□□□□□ -0.61
GABARAPL1-208ENST00000540424 SMCR5Q8TEV8 140 aa11.23□□□□□ -0.61
GABARAPL1-208ENST00000540424 DCANP1Q8TF63 244 aa11.23□□□□□ -0.61
GABARAPL1-208ENST00000540424 IGHV4OR15-8A0A075B7B6 117 aa11.22□□□□□ -0.61
GABARAPL1-208ENST00000540424 A0A087WW49 117 aa11.22□□□□□ -0.61
GABARAPL1-208ENST00000540424 KLLNB2CW77 178 aa11.22□□□□□ -0.61
GABARAPL1-208ENST00000540424 CLEC2BQ92478 149 aa11.22□□□□□ -0.61
GABARAPL1-208ENST00000540424 USP9XQ93008 2570 aaPredicted RBP11.22□□□□□ -0.61
GABARAPL1-208ENST00000540424 FASNP49327 2511 aaKnown RBP11.21□□□□□ -0.61
GABARAPL1-208ENST00000540424 POLR2KP53803 58 aaKnown RBP11.21□□□□□ -0.61
GABARAPL1-208ENST00000540424 DEFB1P60022 68 aa11.21□□□□□ -0.61
GABARAPL1-208ENST00000540424 SNRPD3P62318 126 aaKnown RBP11.21□□□□□ -0.61
GABARAPL1-208ENST00000540424 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
GABARAPL1-208ENST00000540424 VCYO14598 125 aa11.21□□□□□ -0.62
GABARAPL1-208ENST00000540424 ATOX1O00244 68 aa11.2□□□□□ -0.62
GABARAPL1-208ENST00000540424 HIST1H4AP62805 103 aaKnown RBP11.2□□□□□ -0.62
GABARAPL1-208ENST00000540424 LITAFQ99732 161 aa11.2□□□□□ -0.62
GABARAPL1-208ENST00000540424 TENM4Q6N022 2769 aa11.2□□□□□ -0.62
GABARAPL1-208ENST00000540424 GCN1Q92616 2671 aaKnown RBP11.2□□□□□ -0.62
GABARAPL1-208ENST00000540424 NXPH4O95158 308 aa11.2□□□□□ -0.62
GABARAPL1-208ENST00000540424 Q6YL49 198 aa11.2□□□□□ -0.62
GABARAPL1-208ENST00000540424 I3L3M4 83 aa11.19□□□□□ -0.62
GABARAPL1-208ENST00000540424 GNRH2O43555 120 aa11.19□□□□□ -0.62
GABARAPL1-208ENST00000540424 TRACP01848 142 aa11.19□□□□□ -0.62
GABARAPL1-208ENST00000540424 TMEM258P61165 79 aa11.19□□□□□ -0.62
GABARAPL1-208ENST00000540424 FSHBP01225 129 aa11.19□□□□□ -0.62
GABARAPL1-208ENST00000540424 RNASE3P12724 160 aaKnown RBP11.19□□□□□ -0.62
GABARAPL1-208ENST00000540424 LRRK2Q5S007 2527 aa11.18□□□□□ -0.62
GABARAPL1-208ENST00000540424 PEMTQ9UBM1 199 aa11.18□□□□□ -0.62
GABARAPL1-208ENST00000540424 IGHV4-31P0DP07 118 aa11.18□□□□□ -0.62
GABARAPL1-208ENST00000540424 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
GABARAPL1-208ENST00000540424 UBE2E2Q96LR5 201 aa11.18□□□□□ -0.62
GABARAPL1-208ENST00000540424 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
GABARAPL1-208ENST00000540424 SVEP1Q4LDE5 3571 aa11.17□□□□□ -0.62
GABARAPL1-208ENST00000540424 F5H768 121 aa11.17□□□□□ -0.62
GABARAPL1-208ENST00000540424 EDN2P20800 178 aa11.17□□□□□ -0.62
GABARAPL1-208ENST00000540424 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
GABARAPL1-208ENST00000540424 SPTAN1Q13813 2472 aaKnown RBP11.16□□□□□ -0.62
GABARAPL1-208ENST00000540424 K7EQG2 157 aa11.16□□□□□ -0.62
GABARAPL1-208ENST00000540424 SPRY2O43597 315 aa11.16□□□□□ -0.62
GABARAPL1-208ENST00000540424 LINC00315P59091 139 aa11.16□□□□□ -0.62
GABARAPL1-208ENST00000540424 hADV29S1A0JD25 119 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 MIAQ16674 131 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 TMEM61Q8N0U2 210 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 MAPK1IP1LQ8NDC0 245 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 MRAPQ8TCY5 172 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 DOPEY2Q9Y3R5 2298 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 IGHV3-64A0A075B6Q5 118 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 TRBV27A0A0K0K1C4 114 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 SYNJ2BPP57105 145 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 DEFB113Q30KQ7 82 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 TIMM21Q9BVV7 248 aa11.15□□□□□ -0.62
GABARAPL1-208ENST00000540424 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.15□□□□□ -0.63
GABARAPL1-208ENST00000540424 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
GABARAPL1-208ENST00000540424 PRSS2P07478 247 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms