RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TRAV2A0A0B4J234 112 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 IGHV3-30P01768 117 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 CFC1BP0CG36 223 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 CFC1P0CG37 223 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 IGHV3-30-5P0DP03 117 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 LGALS3P17931 250 aaKnown RBP10.26□□□□□ -0.77
UBE3B-210ENST00000539599 NPC2P61916 151 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 RAX2Q96IS3 184 aa10.26□□□□□ -0.77
UBE3B-210ENST00000539599 NSUN5P1Q3KNT7 163 aa10.25□□□□□ -0.77
UBE3B-210ENST00000539599 XCL2Q9UBD3 114 aa10.25□□□□□ -0.77
UBE3B-210ENST00000539599 ANK3Q12955 4377 aaKnown RBP10.25□□□□□ -0.77
UBE3B-210ENST00000539599 AZU1P20160 251 aa10.25□□□□□ -0.77
UBE3B-210ENST00000539599 NDUFA11Q86Y39 141 aa10.25□□□□□ -0.77
UBE3B-210ENST00000539599 J3QLI3 93 aa10.24□□□□□ -0.77
UBE3B-210ENST00000539599 SAMD13Q5VXD3 122 aa10.24□□□□□ -0.77
UBE3B-210ENST00000539599 VCX2Q9H322 139 aa10.24□□□□□ -0.77
UBE3B-210ENST00000539599 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
UBE3B-210ENST00000539599 TRGV11A0A075B6L2 103 aa10.24□□□□□ -0.77
UBE3B-210ENST00000539599 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
UBE3B-210ENST00000539599 LINC01619G3V211 115 aa10.24□□□□□ -0.77
UBE3B-210ENST00000539599 C10orf126Q8N4M7 172 aa10.24□□□□□ -0.77
UBE3B-210ENST00000539599 LINC01587Q99440 93 aa10.24□□□□□ -0.77
UBE3B-210ENST00000539599 RHODO00212 210 aa10.23□□□□□ -0.77
UBE3B-210ENST00000539599 TMEM89A2RUT3 159 aa10.23□□□□□ -0.77
UBE3B-210ENST00000539599 F8W1H4 67 aa10.23□□□□□ -0.77
UBE3B-210ENST00000539599 ZNF843Q8N446 348 aa10.23□□□□□ -0.77
UBE3B-210ENST00000539599 SLC25A29Q8N8R3 303 aa10.23□□□□□ -0.77
UBE3B-210ENST00000539599 DYNLRB2Q8TF09 96 aa10.23□□□□□ -0.77
UBE3B-210ENST00000539599 A4D1N5 150 aa10.22□□□□□ -0.77
UBE3B-210ENST00000539599 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
UBE3B-210ENST00000539599 FN1P02751 2386 aaKnown RBP10.22□□□□□ -0.77
UBE3B-210ENST00000539599 TCL1BO95988 128 aa10.22□□□□□ -0.77
UBE3B-210ENST00000539599 IGHV3-53P01767 116 aa10.21□□□□□ -0.77
UBE3B-210ENST00000539599 SMAGPQ0VAQ4 97 aa10.21□□□□□ -0.77
UBE3B-210ENST00000539599 RHOHQ15669 191 aa10.21□□□□□ -0.77
UBE3B-210ENST00000539599 DEFB113Q30KQ7 82 aa10.21□□□□□ -0.77
UBE3B-210ENST00000539599 Q6ZSV7 163 aa10.21□□□□□ -0.77
UBE3B-210ENST00000539599 WFDC11Q8NEX6 87 aa10.21□□□□□ -0.77
UBE3B-210ENST00000539599 TNFRSF18Q9Y5U5 241 aa10.21□□□□□ -0.77
UBE3B-210ENST00000539599 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.78
UBE3B-210ENST00000539599 CFAP126Q5VTH2 177 aa10.21□□□□□ -0.78
UBE3B-210ENST00000539599 NFE4Q86UQ8 179 aa10.21□□□□□ -0.78
UBE3B-210ENST00000539599 MUSTN1Q8IVN3 82 aa10.21□□□□□ -0.78
UBE3B-210ENST00000539599 SPINK8P0C7L1 97 aa10.2□□□□□ -0.78
UBE3B-210ENST00000539599 LINC00467Q9BRT7 94 aa10.2□□□□□ -0.78
UBE3B-210ENST00000539599 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
UBE3B-210ENST00000539599 A6NJY4 79 aa10.2□□□□□ -0.78
UBE3B-210ENST00000539599 Q6ZUT4 128 aa10.2□□□□□ -0.78
UBE3B-210ENST00000539599 KRTAP1-3Q8IUG1 177 aa10.2□□□□□ -0.78
UBE3B-210ENST00000539599 NDUFA7O95182 113 aa10.2□□□□□ -0.78
UBE3B-210ENST00000539599 RNF152Q8N8N0 203 aa10.2□□□□□ -0.78
UBE3B-210ENST00000539599 WFDC10AQ9H1F0 79 aa10.2□□□□□ -0.78
UBE3B-210ENST00000539599 IGHV3-30-3P0DP02 117 aa10.19□□□□□ -0.78
UBE3B-210ENST00000539599 DEFB114Q30KQ6 69 aa10.19□□□□□ -0.78
UBE3B-210ENST00000539599 M0R2P5 195 aa10.19□□□□□ -0.78
UBE3B-210ENST00000539599 LEPROTO15243 131 aa10.19□□□□□ -0.78
UBE3B-210ENST00000539599 DAND5Q8N907 189 aa10.19□□□□□ -0.78
UBE3B-210ENST00000539599 C11orf72Q8NBR9 251 aa10.19□□□□□ -0.78
UBE3B-210ENST00000539599 CHCHD7Q9BUK0 85 aa10.19□□□□□ -0.78
UBE3B-210ENST00000539599 GCN1Q92616 2671 aaKnown RBP10.19□□□□□ -0.78
UBE3B-210ENST00000539599 ODF3L2Q3SX64 289 aa10.18□□□□□ -0.78
UBE3B-210ENST00000539599 UBE2D3P61077 147 aa10.18□□□□□ -0.78
UBE3B-210ENST00000539599 UBE2D2P62837 147 aa10.18□□□□□ -0.78
UBE3B-210ENST00000539599 ADAMTSL4-AS1Q5T5F5 129 aa10.18□□□□□ -0.78
UBE3B-210ENST00000539599 GAGE12HA6NDE8 117 aa10.17□□□□□ -0.78
UBE3B-210ENST00000539599 SCGB1C2P0DMR2 95 aa10.17□□□□□ -0.78
UBE3B-210ENST00000539599 FHL3Q13643 280 aa10.17□□□□□ -0.78
UBE3B-210ENST00000539599 ESM1Q9NQ30 184 aa10.17□□□□□ -0.78
UBE3B-210ENST00000539599 PDZD2O15018 2839 aa10.17□□□□□ -0.78
UBE3B-210ENST00000539599 A0A0J9YXY3 114 aa10.17□□□□□ -0.78
UBE3B-210ENST00000539599 PRSS2P07478 247 aa10.17□□□□□ -0.78
UBE3B-210ENST00000539599 PLA2G2AP14555 144 aa10.17□□□□□ -0.78
UBE3B-210ENST00000539599 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.17□□□□□ -0.78
UBE3B-210ENST00000539599 C4orf3Q8WVX3 66 aa10.17□□□□□ -0.78
UBE3B-210ENST00000539599 ZNF415Q09FC8 603 aa10.16□□□□□ -0.78
UBE3B-210ENST00000539599 TIMM21Q9BVV7 248 aa10.16□□□□□ -0.78
UBE3B-210ENST00000539599 VWFP04275 2813 aa10.16□□□□□ -0.78
UBE3B-210ENST00000539599 A0A0U1RRA0 63 aa10.16□□□□□ -0.78
UBE3B-210ENST00000539599 TMEM238C9JI98 176 aa10.16□□□□□ -0.78
UBE3B-210ENST00000539599 PEMTQ9UBM1 199 aa10.16□□□□□ -0.78
UBE3B-210ENST00000539599 UBE2D4Q9Y2X8 147 aa10.16□□□□□ -0.78
UBE3B-210ENST00000539599 HELZ2Q9BYK8 2649 aaKnown RBP10.16□□□□□ -0.78
UBE3B-210ENST00000539599 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
UBE3B-210ENST00000539599 TRGV1A0A0A0MS02 117 aa10.15□□□□□ -0.78
UBE3B-210ENST00000539599 NOTCH2Q04721 2471 aa10.15□□□□□ -0.78
UBE3B-210ENST00000539599 DNAJC9-AS1A6NH13 148 aa10.14□□□□□ -0.79
UBE3B-210ENST00000539599 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
UBE3B-210ENST00000539599 A8MWV9 139 aa10.14□□□□□ -0.79
UBE3B-210ENST00000539599 C1orf158Q8N1D5 194 aa10.14□□□□□ -0.79
UBE3B-210ENST00000539599 Q8N2B8 174 aa10.14□□□□□ -0.79
UBE3B-210ENST00000539599 ZNF625Q96I27 306 aaPredicted RBP10.14□□□□□ -0.79
UBE3B-210ENST00000539599 COX6A2Q02221 97 aa10.14□□□□□ -0.79
UBE3B-210ENST00000539599 Q1RN00 199 aa10.14□□□□□ -0.79
UBE3B-210ENST00000539599 Q6ZTI0 123 aa10.14□□□□□ -0.79
UBE3B-210ENST00000539599 TMEM263Q8WUH6 116 aaKnown RBP10.14□□□□□ -0.79
UBE3B-210ENST00000539599 CARD19Q96LW7 228 aa10.14□□□□□ -0.79
UBE3B-210ENST00000539599 FOXI1Q12951 378 aa10.13□□□□□ -0.79
UBE3B-210ENST00000539599 LITAFQ99732 161 aa10.13□□□□□ -0.79
UBE3B-210ENST00000539599 CDKN2A-AS1Q9UH64 79 aa10.13□□□□□ -0.79
UBE3B-210ENST00000539599 FASNP49327 2511 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms