RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 Q8N976 141 aa10.54□□□□□ -0.72
RPAIN-206ENST00000539417 YPEL4Q96NS1 127 aa10.54□□□□□ -0.72
RPAIN-206ENST00000539417 KLK12Q9UKR0 248 aa10.54□□□□□ -0.72
RPAIN-206ENST00000539417 LRP1BQ9NZR2 4599 aa10.53□□□□□ -0.72
RPAIN-206ENST00000539417 TRBV6-5A0A0K0K1A5 114 aa10.53□□□□□ -0.72
RPAIN-206ENST00000539417 FUSP35637 526 aaKnown RBP eCLIP10.53□□□□□ -0.72
RPAIN-206ENST00000539417 NRACQ8N912 160 aa10.53□□□□□ -0.72
RPAIN-206ENST00000539417 FRZBQ92765 325 aa10.53□□□□□ -0.72
RPAIN-206ENST00000539417 TRBV25-1A0A075B6N4 114 aa10.52□□□□□ -0.73
RPAIN-206ENST00000539417 A0A087WX48 190 aa10.52□□□□□ -0.73
RPAIN-206ENST00000539417 IGHV1-24A0A0C4DH33 117 aa10.52□□□□□ -0.73
RPAIN-206ENST00000539417 SDHAF1A6NFY7 115 aa10.52□□□□□ -0.73
RPAIN-206ENST00000539417 HBBP68871 147 aa10.52□□□□□ -0.73
RPAIN-206ENST00000539417 MRAP2Q96G30 205 aa10.52□□□□□ -0.73
RPAIN-206ENST00000539417 URGCP-MRPS24S4R325 110 aa10.52□□□□□ -0.73
RPAIN-206ENST00000539417 TMEM97Q5BJF2 176 aa10.51□□□□□ -0.73
RPAIN-206ENST00000539417 NFE4Q86UQ8 179 aa10.51□□□□□ -0.73
RPAIN-206ENST00000539417 KIAA1109Q2LD37 5005 aa10.51□□□□□ -0.73
RPAIN-206ENST00000539417 A0A1B0GW15 77 aa10.5□□□□□ -0.73
RPAIN-206ENST00000539417 POLR2KP53803 58 aaKnown RBP10.5□□□□□ -0.73
RPAIN-206ENST00000539417 KRTAP10-2P60368 255 aa10.5□□□□□ -0.73
RPAIN-206ENST00000539417 RBX1P62877 108 aa10.5□□□□□ -0.73
RPAIN-206ENST00000539417 COTL1Q14019 142 aa10.5□□□□□ -0.73
RPAIN-206ENST00000539417 LAGE3Q14657 143 aa10.5□□□□□ -0.73
RPAIN-206ENST00000539417 ELOBQ15370 118 aa10.5□□□□□ -0.73
RPAIN-206ENST00000539417 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
RPAIN-206ENST00000539417 TSHBP01222 138 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 AMTP48728 403 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 KCNIP4Q6PIL6 250 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 ENHOQ6UWT2 76 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 TMEM243Q9BU79 118 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 ST20Q9HBF5 79 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 IGLV4-60A0A075B6I1 120 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 LRCOL1A6NCL2 159 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 S100PP25815 95 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 ATP5L2Q7Z4Y8 100 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
RPAIN-206ENST00000539417 TRBV24-1A0A075B6N3 115 aa10.48□□□□□ -0.73
RPAIN-206ENST00000539417 A0A087WTM6 91 aa10.48□□□□□ -0.73
RPAIN-206ENST00000539417 ANGP03950 147 aaKnown RBP10.48□□□□□ -0.73
RPAIN-206ENST00000539417 PMCHP20382 165 aa10.48□□□□□ -0.73
RPAIN-206ENST00000539417 WFDC2Q14508 124 aa10.48□□□□□ -0.73
RPAIN-206ENST00000539417 CLPSL2Q6UWE3 100 aa10.48□□□□□ -0.73
RPAIN-206ENST00000539417 SPATA12Q7Z6I5 190 aa10.48□□□□□ -0.73
RPAIN-206ENST00000539417 C20orf203Q8NBC4 194 aa10.48□□□□□ -0.73
RPAIN-206ENST00000539417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.47□□□□□ -0.73
RPAIN-206ENST00000539417 IGKV2-29A2NJV5 120 aaPredicted RBP10.47□□□□□ -0.73
RPAIN-206ENST00000539417 D6R8Y8 96 aa10.47□□□□□ -0.73
RPAIN-206ENST00000539417 I3L3M4 83 aa10.47□□□□□ -0.73
RPAIN-206ENST00000539417 BTF3L4Q96K17 158 aa10.47□□□□□ -0.73
RPAIN-206ENST00000539417 TRAV8-3A0A0A6YYJ7 113 aa10.46□□□□□ -0.74
RPAIN-206ENST00000539417 TRBV27A0A0K0K1C4 114 aa10.46□□□□□ -0.74
RPAIN-206ENST00000539417 NPYP01303 97 aa10.46□□□□□ -0.74
RPAIN-206ENST00000539417 S100A8P05109 93 aa10.46□□□□□ -0.74
RPAIN-206ENST00000539417 CKS2P33552 79 aa10.46□□□□□ -0.74
RPAIN-206ENST00000539417 IMMP2LQ96T52 175 aa10.46□□□□□ -0.74
RPAIN-206ENST00000539417 APOBP04114 4563 aaKnown RBP10.46□□□□□ -0.74
RPAIN-206ENST00000539417 TGIF2-C20orf24A0A0A6YYL0 155 aa10.45□□□□□ -0.74
RPAIN-206ENST00000539417 PSCAO43653 123 aa10.45□□□□□ -0.74
RPAIN-206ENST00000539417 TNFRSF6BO95407 300 aa10.45□□□□□ -0.74
RPAIN-206ENST00000539417 S100A6P06703 90 aa10.45□□□□□ -0.74
RPAIN-206ENST00000539417 SUMO2P61956 95 aaKnown RBP10.45□□□□□ -0.74
RPAIN-206ENST00000539417 LINC00269Q8N2A0 174 aa10.45□□□□□ -0.74
RPAIN-206ENST00000539417 IGKV2D-24A0A075B6R9 120 aa10.44□□□□□ -0.74
RPAIN-206ENST00000539417 APCSP02743 223 aa10.44□□□□□ -0.74
RPAIN-206ENST00000539417 ESDP10768 282 aa10.44□□□□□ -0.74
RPAIN-206ENST00000539417 PRR34Q9NV39 138 aa10.44□□□□□ -0.74
RPAIN-206ENST00000539417 HERC2O95714 4834 aa10.44□□□□□ -0.74
RPAIN-206ENST00000539417 RYR1P21817 5038 aa10.44□□□□□ -0.74
RPAIN-206ENST00000539417 LECT2O14960 151 aa10.43□□□□□ -0.74
RPAIN-206ENST00000539417 TMEM136Q6ZRR5 245 aa10.43□□□□□ -0.74
RPAIN-206ENST00000539417 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
RPAIN-206ENST00000539417 VCYO14598 125 aa10.42□□□□□ -0.74
RPAIN-206ENST00000539417 UBE2L6O14933 153 aa10.42□□□□□ -0.74
RPAIN-206ENST00000539417 PKIAP61925 76 aa10.42□□□□□ -0.74
RPAIN-206ENST00000539417 KRTAP26-1Q6PEX3 210 aa10.42□□□□□ -0.74
RPAIN-206ENST00000539417 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
RPAIN-206ENST00000539417 C16orf90A8MZG2 172 aa10.41□□□□□ -0.74
RPAIN-206ENST00000539417 PPP1R17O96001 155 aa10.41□□□□□ -0.74
RPAIN-206ENST00000539417 CRPP02741 224 aa10.41□□□□□ -0.74
RPAIN-206ENST00000539417 FGF6P10767 208 aa10.41□□□□□ -0.74
RPAIN-206ENST00000539417 ORMDL3Q8N138 153 aa10.41□□□□□ -0.74
RPAIN-206ENST00000539417 PRELID3AQ96N28 172 aa10.41□□□□□ -0.74
RPAIN-206ENST00000539417 C20orf78Q9BR46 151 aa10.41□□□□□ -0.74
RPAIN-206ENST00000539417 TM2D2Q9BX73 214 aa10.41□□□□□ -0.74
RPAIN-206ENST00000539417 TRAV9-1A0A075B6T8 112 aa10.4□□□□□ -0.74
RPAIN-206ENST00000539417 C5orf52A6NGY3 159 aa10.4□□□□□ -0.74
RPAIN-206ENST00000539417 REG3AQ06141 175 aa10.4□□□□□ -0.74
RPAIN-206ENST00000539417 Q0VG73 95 aa10.4□□□□□ -0.74
RPAIN-206ENST00000539417 SMIM2Q9BVW6 85 aa10.4□□□□□ -0.74
RPAIN-206ENST00000539417 HSPG2P98160 4391 aa10.4□□□□□ -0.75
RPAIN-206ENST00000539417 DNAH8Q96JB1 4490 aa10.39□□□□□ -0.75
RPAIN-206ENST00000539417 IGLV10-54A0A075B6I4 117 aa10.39□□□□□ -0.75
RPAIN-206ENST00000539417 PPBPP02775 128 aa10.39□□□□□ -0.75
RPAIN-206ENST00000539417 SNRPEP62304 92 aaKnown RBP10.39□□□□□ -0.75
RPAIN-206ENST00000539417 KIAA1644Q3SXP7 199 aa10.39□□□□□ -0.75
RPAIN-206ENST00000539417 RNASEKQ6P5S7 137 aaKnown RBP10.39□□□□□ -0.75
RPAIN-206ENST00000539417 TCAPO15273 167 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms