RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 HIGD2BQ4VC39 106 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 NOP10Q9NPE3 64 aaKnown RBP4.37□□□□□ -1.71
CSMD1-215ENST00000537824 VWCEQ96DN2 955 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 NDUFB1O75438 58 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 COX7BP24311 80 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 Q8TCH9 128 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 IMUPQ9GZP8 106 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 TEX22C9J3V5 150 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 RUSC1-AS1Q66K80 236 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 IGLV10-54A0A075B6I4 117 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 UCNP55089 124 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 SEC61GP60059 68 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 BLCAPP62952 87 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 TIMM17AQ99595 171 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 IGLV3-1P01715 115 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 MRPL36Q9P0J6 103 aaKnown RBP4.36□□□□□ -1.71
CSMD1-215ENST00000537824 PPDPFQ9H3Y8 114 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 LRCOL1A6NCL2 159 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 Q0VFX4 171 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 FAM19A3Q7Z5A8 133 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 FGF23Q9GZV9 251 aaPredicted RBP4.36□□□□□ -1.71
CSMD1-215ENST00000537824 A0A096LPF7 62 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 LYRM9A8MSI8 78 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 DIAPH2-AS1Q14236 149 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 LENEPQ9Y5L5 61 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 GYPEP15421 78 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 GATA3P23771 443 aa4.36□□□□□ -1.71
CSMD1-215ENST00000537824 MIR7-3HGQ8N6C7 128 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 SEM1Q6ZVN7 128 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 K7EIM0 57 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 LOXP28300 417 aaPredicted RBP4.35□□□□□ -1.71
CSMD1-215ENST00000537824 LINC00322Q6ZN03 302 aaPredicted RBP4.35□□□□□ -1.71
CSMD1-215ENST00000537824 RITA1Q96K30 269 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 U3KQK5 164 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 COL4A3Q01955 1670 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 TEP1Q99973 2627 aaKnown RBP4.35□□□□□ -1.71
CSMD1-215ENST00000537824 E7EQL1 145 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 MRPS36P82909 103 aaKnown RBP4.35□□□□□ -1.71
CSMD1-215ENST00000537824 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 FLNAP21333 2647 aaKnown RBP4.35□□□□□ -1.71
CSMD1-215ENST00000537824 TRBV6-1A0A0K0K1D8 114 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 SOSTDC1Q6X4U4 206 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 H7C423 109 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 MBD6Q96DN6 1003 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 IGKV1OR2-108A0A075B7D4 117 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 TRBV27A0A0K0K1C4 114 aa4.35□□□□□ -1.71
CSMD1-215ENST00000537824 Q6Q795 121 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 A0A0J9YY99 117 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 H0Y9J4 135 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 IGHV1-69P01742 117 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 TIRAPP58753 221 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 A0A0J9YWU9 116 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 MIFP14174 115 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 A0A0G2JNJ9 132 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 DEFB1P60022 68 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 C9orf47Q6ZRZ4 202 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 Q9UFV3 132 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 IGHV3-30P01768 117 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 IGHV3-30-5P0DP03 117 aa4.34□□□□□ -1.71
CSMD1-215ENST00000537824 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.72
CSMD1-215ENST00000537824 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.72
CSMD1-215ENST00000537824 PSPHP1O15172 72 aa4.34□□□□□ -1.72
CSMD1-215ENST00000537824 Q6JHZ5 121 aa4.34□□□□□ -1.72
CSMD1-215ENST00000537824 Q8N976 141 aa4.34□□□□□ -1.72
CSMD1-215ENST00000537824 IGLV3-9A0A075B6K5 115 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 Q6ZS92 163 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 LINC00526Q96FQ7 95 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 CAMK2N2Q96S95 79 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 I3L2K1 104 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 TRBV7-3A0A075B6L6 115 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 ZNF503-AS2A6NEH8 195 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 LST1O00453 97 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 IGLV2-14P01704 120 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 LINC00310P59036 64 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 TMEM263Q8WUH6 116 aaKnown RBP4.33□□□□□ -1.72
CSMD1-215ENST00000537824 LINC01619G3V211 115 aa4.33□□□□□ -1.72
CSMD1-215ENST00000537824 CEMP1Q6PRD7 247 aaPredicted RBP4.33□□□□□ -1.72
CSMD1-215ENST00000537824 ZNF883P0CG24 379 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 C11orf53Q8IXP5 236 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 NEXN-AS1Q8NBZ9 246 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 NDUFA1O15239 70 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 J3QLI3 93 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 TMEM105Q8N8V8 129 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 IGHV4-30-2A0A087WSY4 118 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 K7ERS5 55 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 NPBQ8NG41 125 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 RMI2Q96E14 147 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 MDFICQ9P1T7 246 aa4.32□□□□□ -1.72
CSMD1-215ENST00000537824 NANOS2P60321 138 aaKnown RBP4.32□□□□□ -1.72
CSMD1-215ENST00000537824 SPAG11BQ08648 103 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 WFDC10BQ8IUB3 73 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 LTBP2Q14767 1821 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 LINC00467Q9BRT7 94 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 B4DSR2 109 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 K7EQD1 137 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 ZNF22P17026 224 aaPredicted RBP4.31□□□□□ -1.72
CSMD1-215ENST00000537824 SPRY4Q9C004 299 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 PRSS33Q8NF86 280 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms