RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RPL18AQ02543 176 aaKnown RBP2.77□□□□□ -1.97
MCF2-210ENST00000536274 MRGPRG-AS1Q2M3A8 158 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 KRTAP1-3Q8IUG1 177 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 TMEM243Q9BU79 118 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 TIMM21Q9BVV7 248 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 USP17L23D6RBM5 183 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 LST1O00453 97 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 SUMO2P61956 95 aaKnown RBP2.77□□□□□ -1.97
MCF2-210ENST00000536274 SEM1Q6ZVN7 128 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 ZNF491Q8N8L2 437 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 DCANP1Q8TF63 244 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 C22orf24Q9Y442 160 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 ABCA4P78363 2273 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 UNC79Q9P2D8 2635 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 IGHV3OR16-10A0A075B7F0 116 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 IGHV7-4-1A0A0J9YVY3 117 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 A0A0J9YXV3 536 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 A0A0J9YXY3 114 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 TRBV30A0A0K0K1B3 111 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 H3BS24 57 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 ATOX1O00244 68 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 IGLV2-23P01705 113 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 FAM229BQ4G0N7 80 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 LYPD5Q6UWN5 251 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 SERP2Q8N6R1 65 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 FAM218AQ96MZ4 157 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 SLC50A1Q9BRV3 221 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 C14orf132Q9NPU4 83 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 A0A0B4J2C4 111 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 FAM240AA0A1B0GVK7 77 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 BUB1B-PAK6H3BSN5 160 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 H3BT86 120 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 RPL27AP46776 148 aaKnown RBP2.76□□□□□ -1.97
MCF2-210ENST00000536274 SUB1P53999 127 aaKnown RBP eCLIP2.76□□□□□ -1.97
MCF2-210ENST00000536274 PSMG4Q5JS54 123 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 PRR9Q5T870 116 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 Q96MF0 132 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 SMAD5-AS1Q9Y6J3 95 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 H3BRN7 92 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 IGHG3P01860 377 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 CGB3P0DN86 165 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 CGB7P0DN87 165 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 Q0VFX4 171 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 FAM19A1Q7Z5A9 133 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 NUP37Q8NFH4 326 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 IMUPQ9GZP8 106 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 LINC00846Q9NV44 126 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 DOPEY2Q9Y3R5 2298 aa2.76□□□□□ -1.97
MCF2-210ENST00000536274 CRYBG3Q68DQ2 2970 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 CLPSL1A2RUU4 121 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 LRCOL1A6NCL2 159 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 BAALC-AS2P0C853 105 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 RPL28P46779 137 aaKnown RBP2.75□□□□□ -1.97
MCF2-210ENST00000536274 CCL8P80075 99 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 C19orf54Q5BKX5 351 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 DEFB121Q5J5C9 76 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 RMI2Q96E14 147 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.75□□□□□ -1.97
MCF2-210ENST00000536274 CCL11P51671 97 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 IMMP1LQ96LU5 166 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 LITAFQ99732 161 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 DEFB127Q9H1M4 99 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 AKAP9Q99996 3911 aa2.75□□□□□ -1.97
MCF2-210ENST00000536274 SPTBN1Q01082 2364 aaKnown RBP2.75□□□□□ -1.97
MCF2-210ENST00000536274 A0A087WZ39 114 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 GNRH2O43555 120 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 COX6CP09669 75 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 ORMDL2Q53FV1 153 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 TMEM167AQ8TBQ9 72 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 TMEM14CQ9P0S9 112 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 MUC4Q99102 2169 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 IGIPA6NJ69 53 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 A8MU10 97 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 TRBV12-3P01733 135 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 SLPIP03973 132 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 ATP1A1-AS1Q5TC04 95 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 AKAP6Q13023 2319 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 USP9YO00507 2555 aaPredicted RBP2.74□□□□□ -1.97
MCF2-210ENST00000536274 IGKV3-7A0A075B6H7 116 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 SRRM5B3KS81 715 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 I3L2K1 104 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 NCR3O14931 201 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 NBR2O15453 112 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 IGHV1-2P23083 117 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 FAM74A4Q5TZK3 123 aa2.74□□□□□ -1.97
MCF2-210ENST00000536274 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.73□□□□□ -1.97
MCF2-210ENST00000536274 TRBV6-1A0A0K0K1D8 114 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 TEX22C9J3V5 150 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 F5H697 171 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 K7EIM0 57 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 ATP5G1P05496 136 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 IGHV3-30-3P0DP02 117 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 XCL1P47992 114 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 PLGLAQ15195 96 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 GPHB5Q86YW7 130 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 CNEP1R1Q8N9A8 125 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 CNFNQ9BYD5 112 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 XCL2Q9UBD3 114 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 KLK9Q9UKQ9 250 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 MAP1AP78559 2803 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms