RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 FOXA3P55318 350 aaPredicted RBP13.43□□□□□ -0.26
LTBR-205ENST00000535739 FER1L6-AS1Q8NA97 138 aa13.43□□□□□ -0.26
LTBR-205ENST00000535739 CIRBP-AS1Q8TBR5 109 aa13.43□□□□□ -0.26
LTBR-205ENST00000535739 TPPP3Q9BW30 176 aa13.43□□□□□ -0.26
LTBR-205ENST00000535739 SSBP4Q9BWG4 385 aaPredicted RBP13.43□□□□□ -0.26
LTBR-205ENST00000535739 FAT3Q8TDW7 4589 aa13.42□□□□□ -0.26
LTBR-205ENST00000535739 F2Z2F3 143 aa13.42□□□□□ -0.26
LTBR-205ENST00000535739 KRTAP10-4P60372 401 aaPredicted RBP13.42□□□□□ -0.26
LTBR-205ENST00000535739 Q0VG73 95 aa13.42□□□□□ -0.26
LTBR-205ENST00000535739 ENHOQ6UWT2 76 aa13.42□□□□□ -0.26
LTBR-205ENST00000535739 OR10AG1Q8NH19 301 aa13.42□□□□□ -0.26
LTBR-205ENST00000535739 PKHD1L1Q86WI1 4243 aa13.42□□□□□ -0.26
LTBR-205ENST00000535739 TRBV6-8A0A0A6YYG3 113 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 HIGD1CA8MV81 97 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 SNAI2O43623 268 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 OR5AL1P0C617 328 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 RAB4BP61018 213 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 ZNF56Q15929 161 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 LYZL1Q6UWQ5 148 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 NEXN-AS1Q8NBZ9 246 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 PGLYRP4Q96LB8 373 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 IMMP2LQ96T52 175 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 C1orf43Q9BWL3 253 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 NAT8BQ9UHF3 227 aa13.41□□□□□ -0.26
LTBR-205ENST00000535739 MPV17L2Q567V2 206 aa13.4□□□□□ -0.26
LTBR-205ENST00000535739 NUP35Q8NFH5 326 aa13.4□□□□□ -0.26
LTBR-205ENST00000535739 MUC21A0A0G2JKD1 596 aa13.38□□□□□ -0.27
LTBR-205ENST00000535739 MUC21A0A140T8X8 626 aa13.38□□□□□ -0.27
LTBR-205ENST00000535739 CRPP02741 224 aa13.38□□□□□ -0.27
LTBR-205ENST00000535739 ANGP03950 147 aaKnown RBP13.38□□□□□ -0.27
LTBR-205ENST00000535739 CTRLP40313 264 aa13.38□□□□□ -0.27
LTBR-205ENST00000535739 C14orf177Q52M58 125 aa13.38□□□□□ -0.27
LTBR-205ENST00000535739 WDR73Q6P4I2 378 aa13.38□□□□□ -0.27
LTBR-205ENST00000535739 SSTP61278 116 aa13.37□□□□□ -0.27
LTBR-205ENST00000535739 CACNG7P62955 275 aa13.37□□□□□ -0.27
LTBR-205ENST00000535739 CHCHD5Q9BSY4 110 aa13.37□□□□□ -0.27
LTBR-205ENST00000535739 S100PP25815 95 aa13.36□□□□□ -0.27
LTBR-205ENST00000535739 SPANXN1Q5VSR9 72 aa13.36□□□□□ -0.27
LTBR-205ENST00000535739 BORCS7Q96B45 105 aa13.36□□□□□ -0.27
LTBR-205ENST00000535739 CNFNQ9BYD5 112 aa13.36□□□□□ -0.27
LTBR-205ENST00000535739 A0A1B0GUT8 65 aa13.35□□□□□ -0.27
LTBR-205ENST00000535739 F5H697 171 aa13.35□□□□□ -0.27
LTBR-205ENST00000535739 USP17L23D6RBM5 183 aa13.34□□□□□ -0.27
LTBR-205ENST00000535739 HLA-DQA1P01909 254 aa13.34□□□□□ -0.27
LTBR-205ENST00000535739 NTF3P20783 257 aa13.34□□□□□ -0.27
LTBR-205ENST00000535739 TWIST1Q15672 202 aa13.34□□□□□ -0.27
LTBR-205ENST00000535739 NTM-AS1Q6ZSK4 140 aa13.34□□□□□ -0.27
LTBR-205ENST00000535739 SMCO4Q9NRQ5 59 aa13.34□□□□□ -0.27
LTBR-205ENST00000535739 RIGQ13278 110 aa13.33□□□□□ -0.28
LTBR-205ENST00000535739 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.33□□□□□ -0.28
LTBR-205ENST00000535739 BTF3L4Q96K17 158 aa13.33□□□□□ -0.28
LTBR-205ENST00000535739 TRAV9-1A0A075B6T8 112 aa13.32□□□□□ -0.28
LTBR-205ENST00000535739 PRSS1P07477 247 aa13.32□□□□□ -0.28
LTBR-205ENST00000535739 MIAQ16674 131 aa13.32□□□□□ -0.28
LTBR-205ENST00000535739 CLPSL2Q6UWE3 100 aa13.32□□□□□ -0.28
LTBR-205ENST00000535739 PKIAP61925 76 aa13.31□□□□□ -0.28
LTBR-205ENST00000535739 MRPL54Q6P161 138 aaKnown RBP13.31□□□□□ -0.28
LTBR-205ENST00000535739 CBLN2Q8IUK8 224 aa13.31□□□□□ -0.28
LTBR-205ENST00000535739 KIF25-AS1Q9Y6Z4 181 aa13.31□□□□□ -0.28
LTBR-205ENST00000535739 SCO1O75880 301 aa13.3□□□□□ -0.28
LTBR-205ENST00000535739 OXTP01178 125 aa13.3□□□□□ -0.28
LTBR-205ENST00000535739 RBX1P62877 108 aa13.3□□□□□ -0.28
LTBR-205ENST00000535739 GAGE6Q13070 117 aa13.3□□□□□ -0.28
LTBR-205ENST00000535739 ATP5L2Q7Z4Y8 100 aa13.3□□□□□ -0.28
LTBR-205ENST00000535739 HMCN2Q8NDA2 5059 aa13.3□□□□□ -0.28
LTBR-205ENST00000535739 A0A1B0GW15 77 aa13.29□□□□□ -0.28
LTBR-205ENST00000535739 SMIM17P0DL12 118 aa13.29□□□□□ -0.28
LTBR-205ENST00000535739 TMEM97Q5BJF2 176 aa13.29□□□□□ -0.28
LTBR-205ENST00000535739 LINC00269Q8N2A0 174 aa13.29□□□□□ -0.28
LTBR-205ENST00000535739 PRR34Q9NV39 138 aa13.29□□□□□ -0.28
LTBR-205ENST00000535739 TRGC1P0CF51 173 aa13.28□□□□□ -0.28
LTBR-205ENST00000535739 CAMPP49913 170 aa13.28□□□□□ -0.28
LTBR-205ENST00000535739 RPL37AP61513 92 aaKnown RBP13.28□□□□□ -0.28
LTBR-205ENST00000535739 SERTAD4-AS1Q5TG53 156 aa13.28□□□□□ -0.28
LTBR-205ENST00000535739 KRTAP26-1Q6PEX3 210 aa13.28□□□□□ -0.28
LTBR-205ENST00000535739 AP1S3Q96PC3 154 aa13.28□□□□□ -0.28
LTBR-205ENST00000535739 TRBV25-1A0A075B6N4 114 aa13.27□□□□□ -0.29
LTBR-205ENST00000535739 TGIF2-C20orf24A0A0A6YYL0 155 aa13.27□□□□□ -0.29
LTBR-205ENST00000535739 A0A1B0GXF2 115 aa13.27□□□□□ -0.29
LTBR-205ENST00000535739 S100A8P05109 93 aa13.27□□□□□ -0.29
LTBR-205ENST00000535739 HBBP68871 147 aa13.27□□□□□ -0.29
LTBR-205ENST00000535739 DGAT2L7PQ6IED9 249 aa13.27□□□□□ -0.29
LTBR-205ENST00000535739 SMIM15Q7Z3B0 74 aa13.27□□□□□ -0.29
LTBR-205ENST00000535739 YPEL4Q96NS1 127 aa13.27□□□□□ -0.29
LTBR-205ENST00000535739 TRBV24-1A0A075B6N3 115 aa13.26□□□□□ -0.29
LTBR-205ENST00000535739 C9orf163Q8N9P6 203 aa13.26□□□□□ -0.29
LTBR-205ENST00000535739 MGPP08493 103 aa13.25□□□□□ -0.29
LTBR-205ENST00000535739 HNRNPA3P51991 378 aaKnown RBP13.25□□□□□ -0.29
LTBR-205ENST00000535739 RASL11AQ6T310 242 aa13.25□□□□□ -0.29
LTBR-205ENST00000535739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.25□□□□□ -0.29
LTBR-205ENST00000535739 IQCJQ1A5X6 159 aa13.24□□□□□ -0.29
LTBR-205ENST00000535739 TMEM191AQ9H0A3 160 aa13.24□□□□□ -0.29
LTBR-205ENST00000535739 IGLV10-54A0A075B6I4 117 aa13.23□□□□□ -0.29
LTBR-205ENST00000535739 IGHV1-24A0A0C4DH33 117 aa13.23□□□□□ -0.29
LTBR-205ENST00000535739 PANO1I0J062 215 aa13.23□□□□□ -0.29
LTBR-205ENST00000535739 M0QY20 66 aa13.23□□□□□ -0.29
LTBR-205ENST00000535739 DPH3P1Q9H4G8 78 aa13.23□□□□□ -0.29
LTBR-205ENST00000535739 REG3AQ06141 175 aa13.22□□□□□ -0.29
LTBR-205ENST00000535739 SUMO4Q6EEV6 95 aa13.22□□□□□ -0.29
LTBR-205ENST00000535739 GATD1Q8NB37 220 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms