RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 SRIP30626 198 aa6.53□□□□□ -1.36
TNC-209ENST00000534839 RPL23P62829 140 aaKnown RBP6.53□□□□□ -1.36
TNC-209ENST00000534839 TWIST1Q15672 202 aa6.53□□□□□ -1.36
TNC-209ENST00000534839 MRPL23Q16540 153 aaKnown RBP6.53□□□□□ -1.36
TNC-209ENST00000534839 PIK3CD-AS1Q5SR53 167 aa6.53□□□□□ -1.36
TNC-209ENST00000534839 FAM231DQ6ZW35 169 aa6.53□□□□□ -1.36
TNC-209ENST00000534839 C14orf178Q8N769 122 aaPredicted RBP6.53□□□□□ -1.36
TNC-209ENST00000534839 SLC25A29Q8N8R3 303 aa6.53□□□□□ -1.36
TNC-209ENST00000534839 PGLYRP4Q96LB8 373 aa6.53□□□□□ -1.36
TNC-209ENST00000534839 MSRB1Q9NZV6 116 aa6.53□□□□□ -1.36
TNC-209ENST00000534839 K7EQD1 137 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 IGLC6P0CF74 106 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 GATA1P15976 413 aaPredicted RBP6.52□□□□□ -1.37
TNC-209ENST00000534839 NTF3P20783 257 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 CACNG7P62955 275 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 ZNF56Q15929 161 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 LINC01620Q4KN68 170 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 ZFP2Q6ZN57 461 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 COMMD7Q86VX2 200 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 OR10G8Q8NGN5 311 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 ISOC2Q96AB3 205 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 BORCS7Q96B45 105 aa6.52□□□□□ -1.37
TNC-209ENST00000534839 TRBV6-4A0A1B0GX49 114 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 GAGE12JA6NER3 117 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 RHODO00212 210 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 CRYGDP07320 174 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 MGPP08493 103 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 GAGE1Q13065 139 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 GAGE4Q13068 117 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 GAGE5Q13069 117 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 RHOHQ15669 191 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 NEGR1Q7Z3B1 354 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 GTSF1Q8WW33 167 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 OSTCQ9NRP0 149 aa6.51□□□□□ -1.37
TNC-209ENST00000534839 PANO1I0J062 215 aa6.5□□□□□ -1.37
TNC-209ENST00000534839 NXPH4O95158 308 aa6.5□□□□□ -1.37
TNC-209ENST00000534839 SMIM15Q7Z3B0 74 aa6.5□□□□□ -1.37
TNC-209ENST00000534839 TSKUQ8WUA8 353 aa6.5□□□□□ -1.37
TNC-209ENST00000534839 AP1S3Q96PC3 154 aa6.5□□□□□ -1.37
TNC-209ENST00000534839 HIGD1CA8MV81 97 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 F8W036 122 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 TRGC1P0CF51 173 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 EVI2AP22794 236 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 RAB4BP61018 213 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 UFSP1Q6NVU6 142 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 UQCC3Q6UW78 93 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 LYPD5Q6UWN5 251 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 LINC01600Q96MT4 127 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 Q9UF83 564 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 V9GYV3 84 aa6.49□□□□□ -1.37
TNC-209ENST00000534839 TMEM218A2RU14 115 aa6.48□□□□□ -1.37
TNC-209ENST00000534839 PSCAO43653 123 aa6.48□□□□□ -1.37
TNC-209ENST00000534839 CTRLP40313 264 aa6.48□□□□□ -1.37
TNC-209ENST00000534839 WDR73Q6P4I2 378 aa6.48□□□□□ -1.37
TNC-209ENST00000534839 SH2D6Q7Z4S9 175 aa6.48□□□□□ -1.37
TNC-209ENST00000534839 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
TNC-209ENST00000534839 ATP6V0E2Q8NHE4 81 aa6.48□□□□□ -1.37
TNC-209ENST00000534839 DPH3P1Q9H4G8 78 aa6.48□□□□□ -1.37
TNC-209ENST00000534839 TRAV9-2A0A087WT02 112 aa6.47□□□□□ -1.37
TNC-209ENST00000534839 A0A1B0GUT8 65 aa6.47□□□□□ -1.37
TNC-209ENST00000534839 LINC00862A6NCI5 91 aa6.47□□□□□ -1.37
TNC-209ENST00000534839 FOXA3P55318 350 aaPredicted RBP6.47□□□□□ -1.37
TNC-209ENST00000534839 RPL36AP83881 106 aaKnown RBP6.47□□□□□ -1.37
TNC-209ENST00000534839 GFRA4Q9GZZ7 299 aa6.47□□□□□ -1.37
TNC-209ENST00000534839 NAT8BQ9UHF3 227 aa6.47□□□□□ -1.37
TNC-209ENST00000534839 FAM231BA6NCW3 169 aa6.46□□□□□ -1.38
TNC-209ENST00000534839 PPP1R2P9O14990 202 aa6.46□□□□□ -1.38
TNC-209ENST00000534839 MT-ND4LP03901 98 aa6.46□□□□□ -1.38
TNC-209ENST00000534839 PNRC1Q12796 327 aaPredicted RBP6.46□□□□□ -1.38
TNC-209ENST00000534839 RIGQ13278 110 aa6.46□□□□□ -1.38
TNC-209ENST00000534839 NUP35Q8NFH5 326 aa6.46□□□□□ -1.38
TNC-209ENST00000534839 KIF25-AS1Q9Y6Z4 181 aa6.46□□□□□ -1.38
TNC-209ENST00000534839 TRBV7-3A0A075B6L6 115 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 TRBV10-1A0A0K0K1A3 114 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 SMIM27A0A1W2PRY6 76 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 H7C1H1 209 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 CAMPP49913 170 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 KRTAP10-8P60410 259 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 WFDC2Q14508 124 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 OR10J3Q5JRS4 329 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.45□□□□□ -1.38
TNC-209ENST00000534839 CNFNQ9BYD5 112 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 GTSF1LQ9H1H1 148 aa6.45□□□□□ -1.38
TNC-209ENST00000534839 TRAV8-6A0A0B4J262 113 aa6.44□□□□□ -1.38
TNC-209ENST00000534839 TRAV26-2A0A0B4J265 109 aa6.44□□□□□ -1.38
TNC-209ENST00000534839 IGHV3-38A0A0C4DH36 116 aa6.44□□□□□ -1.38
TNC-209ENST00000534839 ADCYAP1P18509 176 aa6.44□□□□□ -1.38
TNC-209ENST00000534839 MRPL54Q6P161 138 aaKnown RBP6.44□□□□□ -1.38
TNC-209ENST00000534839 NEXN-AS1Q8NBZ9 246 aa6.44□□□□□ -1.38
TNC-209ENST00000534839 SEC11CQ9BY50 192 aa6.44□□□□□ -1.38
TNC-209ENST00000534839 M0QY20 66 aa6.43□□□□□ -1.38
TNC-209ENST00000534839 RASL11AQ6T310 242 aa6.43□□□□□ -1.38
TNC-209ENST00000534839 WFDC10BQ8IUB3 73 aa6.43□□□□□ -1.38
TNC-209ENST00000534839 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.42□□□□□ -1.38
TNC-209ENST00000534839 UBE2D3P61077 147 aa6.42□□□□□ -1.38
TNC-209ENST00000534839 UBE2D2P62837 147 aa6.42□□□□□ -1.38
TNC-209ENST00000534839 AMN1Q8IY45 258 aa6.42□□□□□ -1.38
TNC-209ENST00000534839 GATD1Q8NB37 220 aa6.42□□□□□ -1.38
TNC-209ENST00000534839 NIT2Q9NQR4 276 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms