RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 TROQ12816 1431 aaPredicted RBP-1.09□□□□□ -2.58
ATM-217ENST00000531957 NSD3Q9BZ95 1437 aa-1.09□□□□□ -2.58
ATM-217ENST00000531957 ADAMTS12P58397 1594 aa-1.09□□□□□ -2.58
ATM-217ENST00000531957 WDR97A6NE52 1622 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 A0A1W2PRE2 83 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 NPFFO15130 113 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 TCRAP04437 139 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 MT1XP80297 61 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 MRPS15P82914 257 aaKnown RBP-1.1□□□□□ -2.59
ATM-217ENST00000531957 HSD17B12Q53GQ0 312 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 TMEM78Q5T7P6 136 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 MNS1Q8NEH6 495 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 THEM6Q8WUY1 208 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 SLC35B3Q9H1N7 401 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 SCN3BQ9NY72 215 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 ERG28Q9UKR5 140 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 NBASA2RRP1 2371 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 GCN1Q92616 2671 aaKnown RBP-1.1□□□□□ -2.59
ATM-217ENST00000531957 EIF3AQ14152 1382 aaKnown RBP-1.1□□□□□ -2.59
ATM-217ENST00000531957 PHIPQ8WWQ0 1821 aa-1.1□□□□□ -2.59
ATM-217ENST00000531957 CCDC171Q6TFL3 1326 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 FER1L6Q2WGJ9 1857 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 ERCC6L2Q5T890 1561 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 TRAV1-2A0A0B4J238 106 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 NCR2O95944 276 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 MT1HL1P0DM35 61 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 POLR2HP52434 150 aaKnown RBP-1.11□□□□□ -2.59
ATM-217ENST00000531957 FXYD6Q9H0Q3 95 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 XIRP1Q702N8 1843 aaKnown RBP-1.11□□□□□ -2.59
ATM-217ENST00000531957 COL4A6Q14031 1691 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 NBEAL2Q6ZNJ1 2754 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 C5orf42Q9H799 3197 aa-1.11□□□□□ -2.59
ATM-217ENST00000531957 GAPVD1Q14C86 1478 aa-1.12□□□□□ -2.59
ATM-217ENST00000531957 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.12□□□□□ -2.593e-10■■■□□ 19.2
ATM-217ENST00000531957 J3KT08 172 aa-1.12□□□□□ -2.59
ATM-217ENST00000531957 SNX29P2Q8IUI4 249 aa-1.12□□□□□ -2.59
ATM-217ENST00000531957 DYNLRB2Q8TF09 96 aa-1.12□□□□□ -2.59
ATM-217ENST00000531957 DOCK1Q14185 1865 aa-1.12□□□□□ -2.59
ATM-217ENST00000531957 IFT172Q9UG01 1749 aa-1.12□□□□□ -2.59
ATM-217ENST00000531957 LRRK2Q5S007 2527 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 RANBP2P49792 3224 aaKnown RBP-1.13□□□□□ -2.59
ATM-217ENST00000531957 COL6A5A8TX70 2615 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 EYSQ5T1H1 3165 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 C9orf92A6NGG3 77 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 H0YJX3 145 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 EDDM3BP56851 147 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 NPC2P61916 151 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 CFAP126Q5VTH2 177 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 CALML5Q9NZT1 146 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 ATPIF1Q9UII2 106 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 NOP16Q9Y3C1 178 aaKnown RBP-1.13□□□□□ -2.59
ATM-217ENST00000531957 NRXN2Q9P2S2 1712 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 SYNMO15061 1565 aa-1.13□□□□□ -2.59
ATM-217ENST00000531957 RIF1Q5UIP0 2472 aaKnown RBP-1.13□□□□□ -2.59
ATM-217ENST00000531957 KDM5AP29375 1690 aaKnown RBP-1.13□□□□□ -2.59
ATM-217ENST00000531957 ACACAQ13085 2346 aa-1.14□□□□□ -2.59
ATM-217ENST00000531957 MTORP42345 2549 aa-1.14□□□□□ -2.59
ATM-217ENST00000531957 LRRC37A2A6NM11 1700 aa-1.14□□□□□ -2.59
ATM-217ENST00000531957 BORCS7-ASMTA0A0B4J1R7 106 aa-1.14□□□□□ -2.59
ATM-217ENST00000531957 H0YAA0 97 aa-1.14□□□□□ -2.59
ATM-217ENST00000531957 H3BNG1 76 aa-1.14□□□□□ -2.59
ATM-217ENST00000531957 RPL7P18124 248 aaKnown RBP-1.14□□□□□ -2.59
ATM-217ENST00000531957 KRTAP19-5Q3LI72 72 aa-1.14□□□□□ -2.59
ATM-217ENST00000531957 IBTKQ9P2D0 1353 aaPredicted RBP-1.14□□□□□ -2.59
ATM-217ENST00000531957 CEP295Q9C0D2 2601 aa-1.14□□□□□ -2.59
ATM-217ENST00000531957 PARP14Q460N5 1801 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 KIF13AQ9H1H9 1805 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 MRC1P22897 1456 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 PTPRMP28827 1452 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 MED23Q9ULK4 1368 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 CLPSL1A2RUU4 121 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 IFNGP01579 166 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 SPCS2Q15005 226 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 BAGE3Q86Y29 109 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 CCDC115Q96NT0 180 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 SPTBN5Q9NRC6 3674 aaKnown RBP-1.15□□□□□ -2.59
ATM-217ENST00000531957 TULP4Q9NRJ4 1543 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 PKD1L2Q7Z442 2459 aa-1.15□□□□□ -2.59
ATM-217ENST00000531957 KNL1Q8NG31 2342 aa-1.16□□□□□ -2.59
ATM-217ENST00000531957 CCDC168Q8NDH2 2452 aa-1.16□□□□□ -2.59
ATM-217ENST00000531957 ARFGEF1Q9Y6D6 1849 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 H0YGG7 62 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 CCDC179H3BU77 68 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 SMIM6P0DI80 62 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 H1FX-AS1Q4G0G2 97 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 TMEM91Q6ZNR0 172 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 OR9Q1Q8NGQ5 310 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 NPVFQ9HCQ7 196 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 TRRAPQ9Y4A5 3859 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 SPENQ96T58 3664 aaKnown RBP-1.16□□□□□ -2.6
ATM-217ENST00000531957 ZFHX3Q15911 3703 aa-1.16□□□□□ -2.6
ATM-217ENST00000531957 ITPR2Q14571 2701 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 BPTFQ12830 3046 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 TRAV12-3A0A0B4J271 114 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 TMEM238C9JI98 176 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 K7EP34 96 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 PITX3O75364 302 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 E2F6O75461 281 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 RBP4P02753 201 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 COX8AP10176 69 aa-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms