RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 ATP6V1G2-DDX39BF2Z307 99 aa1.31□□□□□ -2.2
CAPRIN1-208ENST00000530008 Q5VV11 94 aa1.31□□□□□ -2.2
CAPRIN1-208ENST00000530008 MED13LQ71F56 2210 aa1.31□□□□□ -2.2
CAPRIN1-208ENST00000530008 RIMS1Q86UR5 1692 aaKnown RBP1.3□□□□□ -2.2
CAPRIN1-208ENST00000530008 SIPA1L3O60292 1781 aaPredicted RBP1.3□□□□□ -2.2
CAPRIN1-208ENST00000530008 TRBV7-3A0A075B6L6 115 aa1.3□□□□□ -2.2
CAPRIN1-208ENST00000530008 GCHFRP30047 84 aa1.3□□□□□ -2.2
CAPRIN1-208ENST00000530008 SPAG11BQ08648 103 aa1.3□□□□□ -2.2
CAPRIN1-208ENST00000530008 SPAG11AQ6PDA7 123 aa1.3□□□□□ -2.2
CAPRIN1-208ENST00000530008 GTF2H5Q6ZYL4 71 aa1.3□□□□□ -2.2
CAPRIN1-208ENST00000530008 MRC1P22897 1456 aa1.3□□□□□ -2.2
CAPRIN1-208ENST00000530008 GOLGA3Q08378 1498 aa1.3□□□□□ -2.2
CAPRIN1-208ENST00000530008 ATP5EP56381 51 aaPredicted RBP1.29□□□□□ -2.2
CAPRIN1-208ENST00000530008 MYOZ3Q8TDC0 251 aa1.29□□□□□ -2.2
CAPRIN1-208ENST00000530008 MGST2Q99735 147 aa1.29□□□□□ -2.2
CAPRIN1-208ENST00000530008 ROBO1Q9Y6N7 1651 aa1.29□□□□□ -2.2
CAPRIN1-208ENST00000530008 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
CAPRIN1-208ENST00000530008 TCEAL7Q9BRU2 100 aa1.28□□□□□ -2.2
CAPRIN1-208ENST00000530008 NDUFA4L2Q9NRX3 87 aa1.28□□□□□ -2.2
CAPRIN1-208ENST00000530008 C10orf71Q711Q0 1435 aa1.27□□□□□ -2.21
CAPRIN1-208ENST00000530008 M0R135 149 aa1.27□□□□□ -2.21
CAPRIN1-208ENST00000530008 C14orf144Q96I85 54 aa1.27□□□□□ -2.21
CAPRIN1-208ENST00000530008 C12orf57Q99622 126 aa1.27□□□□□ -2.21
CAPRIN1-208ENST00000530008 PLAC8Q9NZF1 115 aa1.27□□□□□ -2.21
CAPRIN1-208ENST00000530008 V9GYH0 126 aa1.27□□□□□ -2.21
CAPRIN1-208ENST00000530008 PATJQ8NI35 1801 aa1.26□□□□□ -2.21
CAPRIN1-208ENST00000530008 MAPKBP1O60336 1514 aa1.26□□□□□ -2.21
CAPRIN1-208ENST00000530008 G3V318 75 aa1.26□□□□□ -2.21
CAPRIN1-208ENST00000530008 DCDP81605 110 aaKnown RBP1.26□□□□□ -2.21
CAPRIN1-208ENST00000530008 PROK2Q9HC23 129 aa1.26□□□□□ -2.21
CAPRIN1-208ENST00000530008 DYNLRB1Q9NP97 96 aa1.26□□□□□ -2.21
CAPRIN1-208ENST00000530008 NRKQ7Z2Y5 1582 aa1.25□□□□□ -2.21
CAPRIN1-208ENST00000530008 NMBP08949 121 aa1.25□□□□□ -2.21
CAPRIN1-208ENST00000530008 HSD52Q0P140 79 aa1.25□□□□□ -2.21
CAPRIN1-208ENST00000530008 CFAP126Q5VTH2 177 aa1.25□□□□□ -2.21
CAPRIN1-208ENST00000530008 ZNF462Q96JM2 2506 aa1.25□□□□□ -2.21
CAPRIN1-208ENST00000530008 SPINK8P0C7L1 97 aa1.24□□□□□ -2.21
CAPRIN1-208ENST00000530008 LAMC3Q9Y6N6 1575 aa1.24□□□□□ -2.21
CAPRIN1-208ENST00000530008 F5P12259 2224 aa1.24□□□□□ -2.21
CAPRIN1-208ENST00000530008 DOCK1Q14185 1865 aa1.24□□□□□ -2.21
CAPRIN1-208ENST00000530008 CNTLNQ9NXG0 1405 aa1.23□□□□□ -2.21
CAPRIN1-208ENST00000530008 CCNB3Q8WWL7 1395 aa1.23□□□□□ -2.21
CAPRIN1-208ENST00000530008 CTXND1A0A1B0GTU2 59 aa1.23□□□□□ -2.21
CAPRIN1-208ENST00000530008 PRDM2Q13029 1718 aa1.22□□□□□ -2.21
CAPRIN1-208ENST00000530008 SCAPERQ9BY12 1400 aa1.22□□□□□ -2.21
CAPRIN1-208ENST00000530008 MRC2Q9UBG0 1479 aa1.21□□□□□ -2.22
CAPRIN1-208ENST00000530008 GNG11P61952 73 aa1.21□□□□□ -2.22
CAPRIN1-208ENST00000530008 AKAP12Q02952 1782 aa1.21□□□□□ -2.22
CAPRIN1-208ENST00000530008 IFT172Q9UG01 1749 aa1.2□□□□□ -2.22
CAPRIN1-208ENST00000530008 HMGN4O00479 90 aa1.2□□□□□ -2.22
CAPRIN1-208ENST00000530008 RBP2P50120 134 aa1.2□□□□□ -2.22
CAPRIN1-208ENST00000530008 AMELXQ99217 191 aa1.2□□□□□ -2.22
CAPRIN1-208ENST00000530008 ASH1LQ9NR48 2969 aaKnown RBP1.2□□□□□ -2.22
CAPRIN1-208ENST00000530008 SHROOM2Q13796 1616 aa1.19□□□□□ -2.22
CAPRIN1-208ENST00000530008 FBN2P35556 2912 aa1.19□□□□□ -2.22
CAPRIN1-208ENST00000530008 SMIM4Q8WVI0 70 aa1.19□□□□□ -2.22
CAPRIN1-208ENST00000530008 SCRIBQ14160 1630 aa1.18□□□□□ -2.22
CAPRIN1-208ENST00000530008 H3BQ15 152 aa1.18□□□□□ -2.22
CAPRIN1-208ENST00000530008 PIN1P1O15428 100 aa1.18□□□□□ -2.22
CAPRIN1-208ENST00000530008 NPVFQ9HCQ7 196 aa1.18□□□□□ -2.22
CAPRIN1-208ENST00000530008 LOC285095A0A1B0GVY8 99 aa1.17□□□□□ -2.22
CAPRIN1-208ENST00000530008 TMEM218A2RU14 115 aa1.17□□□□□ -2.22
CAPRIN1-208ENST00000530008 F8VRH5 84 aa1.17□□□□□ -2.22
CAPRIN1-208ENST00000530008 CHKB-CPT1BH3BT56 60 aa1.17□□□□□ -2.22
CAPRIN1-208ENST00000530008 UBE2DNLQ8IWF7 75 aa1.17□□□□□ -2.22
CAPRIN1-208ENST00000530008 NOTCH1P46531 2555 aa1.16□□□□□ -2.22
CAPRIN1-208ENST00000530008 IGLC7A0M8Q6 106 aa1.16□□□□□ -2.22
CAPRIN1-208ENST00000530008 TMEM262E9PQX1 116 aa1.16□□□□□ -2.22
CAPRIN1-208ENST00000530008 SNCAP37840 140 aa1.16□□□□□ -2.22
CAPRIN1-208ENST00000530008 BAGE2Q86Y30 109 aa1.16□□□□□ -2.22
CAPRIN1-208ENST00000530008 FAM213BQ8TBF2 198 aa1.16□□□□□ -2.22
CAPRIN1-208ENST00000530008 VPS8Q8N3P4 1428 aa1.15□□□□□ -2.22
CAPRIN1-208ENST00000530008 ZFYVE16Q7Z3T8 1539 aa1.15□□□□□ -2.22
CAPRIN1-208ENST00000530008 ANKRD26Q9UPS8 1709 aa1.15□□□□□ -2.22
CAPRIN1-208ENST00000530008 MYH8P13535 1937 aa1.15□□□□□ -2.22
CAPRIN1-208ENST00000530008 NCMAPQ5T1S8 102 aa1.15□□□□□ -2.23
CAPRIN1-208ENST00000530008 UQCR10Q9UDW1 63 aa1.15□□□□□ -2.23
CAPRIN1-208ENST00000530008 ABCC10Q5T3U5 1492 aa1.15□□□□□ -2.23
CAPRIN1-208ENST00000530008 ARHGAP5Q13017 1502 aa1.15□□□□□ -2.23
CAPRIN1-208ENST00000530008 UNC13BO14795 1591 aa1.14□□□□□ -2.23
CAPRIN1-208ENST00000530008 UQCR11O14957 56 aa1.14□□□□□ -2.23
CAPRIN1-208ENST00000530008 S100A8P05109 93 aa1.14□□□□□ -2.23
CAPRIN1-208ENST00000530008 FAM167A-AS1Q96KT0 104 aa1.14□□□□□ -2.23
CAPRIN1-208ENST00000530008 WNK3Q9BYP7 1800 aa1.14□□□□□ -2.23
CAPRIN1-208ENST00000530008 ZNF609O15014 1411 aa1.14□□□□□ -2.23
CAPRIN1-208ENST00000530008 NAP1L6A6NFF2 107 aa1.13□□□□□ -2.23
CAPRIN1-208ENST00000530008 MPC2O95563 127 aa1.13□□□□□ -2.23
CAPRIN1-208ENST00000530008 PRH1P02810 166 aa1.13□□□□□ -2.23
CAPRIN1-208ENST00000530008 COX17Q14061 63 aa1.13□□□□□ -2.23
CAPRIN1-208ENST00000530008 TMEM170BQ5T4T1 132 aa1.13□□□□□ -2.23
CAPRIN1-208ENST00000530008 CDC42SE2Q9NRR3 84 aa1.13□□□□□ -2.23
CAPRIN1-208ENST00000530008 LINC01558Q9Y6Z2 57 aa1.13□□□□□ -2.23
CAPRIN1-208ENST00000530008 KCPQ6ZWJ8 1503 aa1.13□□□□□ -2.23
CAPRIN1-208ENST00000530008 DOCK2Q92608 1830 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 RAPGEF2Q9Y4G8 1499 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 CC2D2AQ9P2K1 1620 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 TRAV30A0A087WSZ9 112 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 COX6A2Q02221 97 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 Q0VG73 95 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 SSBP3-AS1Q7Z2R9 100 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms