RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 NUDT11Q96G61 164 aa10.19□□□□□ -0.78
COL16A1-216ENST00000529928 AP5S1Q9NUS5 200 aa10.19□□□□□ -0.78
COL16A1-216ENST00000529928 LRP2P98164 4655 aa10.18□□□□□ -0.78
COL16A1-216ENST00000529928 TMEM250H0YL14 139 aa10.18□□□□□ -0.78
COL16A1-216ENST00000529928 SSTP61278 116 aa10.18□□□□□ -0.78
COL16A1-216ENST00000529928 REG3AQ06141 175 aa10.18□□□□□ -0.78
COL16A1-216ENST00000529928 C7orf33Q8WU49 177 aa10.18□□□□□ -0.78
COL16A1-216ENST00000529928 LINC01600Q96MT4 127 aa10.18□□□□□ -0.78
COL16A1-216ENST00000529928 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
COL16A1-216ENST00000529928 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
COL16A1-216ENST00000529928 F5H697 171 aa10.17□□□□□ -0.78
COL16A1-216ENST00000529928 CHTF8P0CG12 524 aa10.17□□□□□ -0.78
COL16A1-216ENST00000529928 AP1S3Q96PC3 154 aa10.17□□□□□ -0.78
COL16A1-216ENST00000529928 BIN3Q9NQY0 253 aa10.17□□□□□ -0.78
COL16A1-216ENST00000529928 PLAC8Q9NZF1 115 aa10.17□□□□□ -0.78
COL16A1-216ENST00000529928 PHOX2AO14813 284 aa10.16□□□□□ -0.78
COL16A1-216ENST00000529928 CTRLP40313 264 aa10.16□□□□□ -0.78
COL16A1-216ENST00000529928 IQCJQ1A5X6 159 aa10.16□□□□□ -0.78
COL16A1-216ENST00000529928 LYZL1Q6UWQ5 148 aa10.16□□□□□ -0.78
COL16A1-216ENST00000529928 TPPP3Q9BW30 176 aa10.16□□□□□ -0.78
COL16A1-216ENST00000529928 CNFNQ9BYD5 112 aa10.16□□□□□ -0.78
COL16A1-216ENST00000529928 RNASE7Q9H1E1 156 aaKnown RBP10.16□□□□□ -0.78
COL16A1-216ENST00000529928 F2Z2F3 143 aa10.15□□□□□ -0.78
COL16A1-216ENST00000529928 M0QY20 66 aa10.15□□□□□ -0.78
COL16A1-216ENST00000529928 NDUFS6O75380 124 aaKnown RBP10.15□□□□□ -0.78
COL16A1-216ENST00000529928 CACNG7P62955 275 aa10.15□□□□□ -0.78
COL16A1-216ENST00000529928 IGHV1-24A0A0C4DH33 117 aa10.14□□□□□ -0.79
COL16A1-216ENST00000529928 XKRY2A2RUG3 117 aa10.14□□□□□ -0.79
COL16A1-216ENST00000529928 SLPIP03973 132 aa10.14□□□□□ -0.79
COL16A1-216ENST00000529928 FAM210AQ96ND0 272 aa10.14□□□□□ -0.79
COL16A1-216ENST00000529928 RPP21Q9H633 154 aaKnown RBP10.14□□□□□ -0.79
COL16A1-216ENST00000529928 SMIM17P0DL12 118 aa10.13□□□□□ -0.79
COL16A1-216ENST00000529928 NTF3P20783 257 aa10.13□□□□□ -0.79
COL16A1-216ENST00000529928 SUMO4Q6EEV6 95 aa10.13□□□□□ -0.79
COL16A1-216ENST00000529928 WDR73Q6P4I2 378 aa10.13□□□□□ -0.79
COL16A1-216ENST00000529928 GTSF1Q8WW33 167 aa10.13□□□□□ -0.79
COL16A1-216ENST00000529928 FAM231DQ6ZW35 169 aa10.12□□□□□ -0.79
COL16A1-216ENST00000529928 C20orf203Q8NBC4 194 aa10.12□□□□□ -0.79
COL16A1-216ENST00000529928 RNF213Q63HN8 5207 aa10.12□□□□□ -0.79
COL16A1-216ENST00000529928 A0A1B0GUV1 79 aa10.11□□□□□ -0.79
COL16A1-216ENST00000529928 TNXBP22105 4242 aa10.11□□□□□ -0.79
COL16A1-216ENST00000529928 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
COL16A1-216ENST00000529928 MGPP08493 103 aa10.1□□□□□ -0.79
COL16A1-216ENST00000529928 SRP19P09132 144 aaKnown RBP10.1□□□□□ -0.79
COL16A1-216ENST00000529928 PRR3P79522 188 aaKnown RBP10.1□□□□□ -0.79
COL16A1-216ENST00000529928 ODF1Q14990 250 aa10.1□□□□□ -0.79
COL16A1-216ENST00000529928 EIF5A2Q9GZV4 153 aaKnown RBP10.1□□□□□ -0.79
COL16A1-216ENST00000529928 IGLV4-60A0A075B6I1 120 aa10.09□□□□□ -0.79
COL16A1-216ENST00000529928 H7C1H1 209 aa10.09□□□□□ -0.79
COL16A1-216ENST00000529928 TRGC1P0CF51 173 aa10.09□□□□□ -0.79
COL16A1-216ENST00000529928 COX6A2Q02221 97 aa10.09□□□□□ -0.79
COL16A1-216ENST00000529928 LINC01551Q86U37 167 aa10.09□□□□□ -0.79
COL16A1-216ENST00000529928 SMIM7Q9BQ49 75 aa10.09□□□□□ -0.79
COL16A1-216ENST00000529928 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
COL16A1-216ENST00000529928 RPS10P46783 165 aaKnown RBP10.08□□□□□ -0.8
COL16A1-216ENST00000529928 CEBPGP53567 150 aa10.08□□□□□ -0.8
COL16A1-216ENST00000529928 FOXA3P55318 350 aaPredicted RBP10.08□□□□□ -0.8
COL16A1-216ENST00000529928 TWIST1Q15672 202 aa10.08□□□□□ -0.8
COL16A1-216ENST00000529928 MAJINQ3KP22 176 aa10.08□□□□□ -0.8
COL16A1-216ENST00000529928 CFAP161Q6P656 301 aa10.08□□□□□ -0.8
COL16A1-216ENST00000529928 REG3GQ6UW15 175 aa10.08□□□□□ -0.8
COL16A1-216ENST00000529928 TEX261Q6UWH6 196 aa10.08□□□□□ -0.8
COL16A1-216ENST00000529928 GFRA4Q9GZZ7 299 aa10.08□□□□□ -0.8
COL16A1-216ENST00000529928 C9JQL5 133 aa10.07□□□□□ -0.8
COL16A1-216ENST00000529928 GATCO43716 136 aaKnown RBP10.07□□□□□ -0.8
COL16A1-216ENST00000529928 CT83Q5H943 113 aa10.07□□□□□ -0.8
COL16A1-216ENST00000529928 RASL11AQ6T310 242 aa10.07□□□□□ -0.8
COL16A1-216ENST00000529928 C15orf56Q8N910 161 aa10.07□□□□□ -0.8
COL16A1-216ENST00000529928 IGKV2-24A0A0C4DH68 120 aa10.06□□□□□ -0.8
COL16A1-216ENST00000529928 KRTAP10-8P60410 259 aa10.06□□□□□ -0.8
COL16A1-216ENST00000529928 SPINK6Q6UWN8 80 aa10.06□□□□□ -0.8
COL16A1-216ENST00000529928 STPG4Q8N801 248 aa10.06□□□□□ -0.8
COL16A1-216ENST00000529928 PRSS3P2Q8NHM4 247 aa10.06□□□□□ -0.8
COL16A1-216ENST00000529928 NIT2Q9NQR4 276 aa10.06□□□□□ -0.8
COL16A1-216ENST00000529928 ZNF727A8MUV8 499 aa10.05□□□□□ -0.8
COL16A1-216ENST00000529928 A8MWL6 223 aa10.05□□□□□ -0.8
COL16A1-216ENST00000529928 UBE2L6O14933 153 aa10.05□□□□□ -0.8
COL16A1-216ENST00000529928 SRSF3P84103 164 aaKnown RBP10.05□□□□□ -0.8
COL16A1-216ENST00000529928 GATD1Q8NB37 220 aa10.05□□□□□ -0.8
COL16A1-216ENST00000529928 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
COL16A1-216ENST00000529928 TRAV26-2A0A0B4J265 109 aa10.04□□□□□ -0.8
COL16A1-216ENST00000529928 OSTCQ9NRP0 149 aa10.04□□□□□ -0.8
COL16A1-216ENST00000529928 GAGE12HA6NDE8 117 aa10.03□□□□□ -0.8
COL16A1-216ENST00000529928 GAS8-AS1O95177 125 aa10.03□□□□□ -0.8
COL16A1-216ENST00000529928 TSKUQ8WUA8 353 aa10.03□□□□□ -0.8
COL16A1-216ENST00000529928 FAM231BA6NCW3 169 aa10.02□□□□□ -0.81
COL16A1-216ENST00000529928 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.81
COL16A1-216ENST00000529928 LINC00474Q9P2X8 69 aa10.02□□□□□ -0.81
COL16A1-216ENST00000529928 V9GYV3 84 aa10.02□□□□□ -0.81
COL16A1-216ENST00000529928 HIGD1CA8MV81 97 aa10.01□□□□□ -0.81
COL16A1-216ENST00000529928 AMTP48728 403 aa10.01□□□□□ -0.81
COL16A1-216ENST00000529928 RPL23P62829 140 aaKnown RBP10.01□□□□□ -0.81
COL16A1-216ENST00000529928 FAM74A3Q4VXF1 159 aa10.01□□□□□ -0.81
COL16A1-216ENST00000529928 ISOC2Q96AB3 205 aa10.01□□□□□ -0.81
COL16A1-216ENST00000529928 RPL39LQ96EH5 51 aaKnown RBP10.01□□□□□ -0.81
COL16A1-216ENST00000529928 A0A096LNI7 61 aa10□□□□□ -0.81
COL16A1-216ENST00000529928 GVQW2A0A096LPI5 108 aaPredicted RBP10□□□□□ -0.81
COL16A1-216ENST00000529928 COTL1Q14019 142 aa10□□□□□ -0.81
COL16A1-216ENST00000529928 TMEM241Q24JQ0 296 aa10□□□□□ -0.81
COL16A1-216ENST00000529928 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms