RNA–Protein interactions for RNA: ENST00000528028.1

ZNF250-205, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-205ENST00000528028 UBR4Q5T4S7 5183 aa12.17□□□□□ -0.46
ZNF250-205ENST00000528028 IGLV10-54A0A075B6I4 117 aa12.17□□□□□ -0.46
ZNF250-205ENST00000528028 SERTAD4-AS1Q5TG53 156 aa12.17□□□□□ -0.46
ZNF250-205ENST00000528028 RASL11AQ6T310 242 aa12.17□□□□□ -0.46
ZNF250-205ENST00000528028 SDIM1Q6ZPB5 146 aa12.17□□□□□ -0.46
ZNF250-205ENST00000528028 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
ZNF250-205ENST00000528028 DPH3P1Q9H4G8 78 aa12.17□□□□□ -0.46
ZNF250-205ENST00000528028 BCL2P10415 239 aa12.16□□□□□ -0.46
ZNF250-205ENST00000528028 C20orf203Q8NBC4 194 aa12.16□□□□□ -0.46
ZNF250-205ENST00000528028 PGLYRP4Q96LB8 373 aa12.16□□□□□ -0.46
ZNF250-205ENST00000528028 MED9Q9NWA0 146 aa12.16□□□□□ -0.46
ZNF250-205ENST00000528028 TRBV20OR9-2A0A075B6H5 130 aa12.15□□□□□ -0.46
ZNF250-205ENST00000528028 LYZL1Q6UWQ5 148 aa12.15□□□□□ -0.46
ZNF250-205ENST00000528028 CLRN3Q8NCR9 226 aa12.15□□□□□ -0.46
ZNF250-205ENST00000528028 GFRA4Q9GZZ7 299 aa12.15□□□□□ -0.46
ZNF250-205ENST00000528028 TRAV8-4A0A0B4J246 113 aa12.14□□□□□ -0.47
ZNF250-205ENST00000528028 A0A1B0GUV1 79 aa12.14□□□□□ -0.47
ZNF250-205ENST00000528028 CTRLP40313 264 aa12.14□□□□□ -0.47
ZNF250-205ENST00000528028 NIT2Q9NQR4 276 aa12.14□□□□□ -0.47
ZNF250-205ENST00000528028 IGLV4-60A0A075B6I1 120 aa12.13□□□□□ -0.47
ZNF250-205ENST00000528028 UBE2L6O14933 153 aa12.13□□□□□ -0.47
ZNF250-205ENST00000528028 SLPIP03973 132 aa12.12□□□□□ -0.47
ZNF250-205ENST00000528028 NTF3P20783 257 aa12.12□□□□□ -0.47
ZNF250-205ENST00000528028 TAGLN2P37802 199 aaKnown RBP12.12□□□□□ -0.47
ZNF250-205ENST00000528028 hDV102S1A0JD36 115 aa12.11□□□□□ -0.47
ZNF250-205ENST00000528028 AMTP48728 403 aa12.11□□□□□ -0.47
ZNF250-205ENST00000528028 CNBPP62633 177 aaKnown RBP12.11□□□□□ -0.47
ZNF250-205ENST00000528028 COTL1Q14019 142 aa12.11□□□□□ -0.47
ZNF250-205ENST00000528028 WDR73Q6P4I2 378 aa12.11□□□□□ -0.47
ZNF250-205ENST00000528028 CNFNQ9BYD5 112 aa12.11□□□□□ -0.47
ZNF250-205ENST00000528028 TWIST1Q15672 202 aa12.1□□□□□ -0.47
ZNF250-205ENST00000528028 NUDT10Q8NFP7 164 aa12.1□□□□□ -0.47
ZNF250-205ENST00000528028 NUDT11Q96G61 164 aa12.1□□□□□ -0.47
ZNF250-205ENST00000528028 RPP21Q9H633 154 aaKnown RBP12.1□□□□□ -0.47
ZNF250-205ENST00000528028 AP5S1Q9NUS5 200 aa12.09□□□□□ -0.47
ZNF250-205ENST00000528028 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.08□□□□□ -0.48
ZNF250-205ENST00000528028 IGHV3-64A0A075B6Q5 118 aa12.07□□□□□ -0.48
ZNF250-205ENST00000528028 CIRBPQ14011 172 aaKnown RBP12.07□□□□□ -0.48
ZNF250-205ENST00000528028 COMMD7Q86VX2 200 aa12.07□□□□□ -0.48
ZNF250-205ENST00000528028 RNASE7Q9H1E1 156 aaKnown RBP12.07□□□□□ -0.48
ZNF250-205ENST00000528028 PLA2G2DQ9UNK4 145 aa12.07□□□□□ -0.48
ZNF250-205ENST00000528028 TRAV26-2A0A0B4J265 109 aa12.06□□□□□ -0.48
ZNF250-205ENST00000528028 K7EN84 100 aa12.06□□□□□ -0.48
ZNF250-205ENST00000528028 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
ZNF250-205ENST00000528028 GATD1Q8NB37 220 aa12.06□□□□□ -0.48
ZNF250-205ENST00000528028 MT1HL1P0DM35 61 aa12.05□□□□□ -0.48
ZNF250-205ENST00000528028 ALKAL2Q6UX46 152 aa12.05□□□□□ -0.48
ZNF250-205ENST00000528028 SMIM15Q7Z3B0 74 aa12.05□□□□□ -0.48
ZNF250-205ENST00000528028 OCC1Q8TAD7 63 aa12.04□□□□□ -0.48
ZNF250-205ENST00000528028 DPH3Q96FX2 82 aa12.04□□□□□ -0.48
ZNF250-205ENST00000528028 A0A087WYN8 130 aa12.03□□□□□ -0.48
ZNF250-205ENST00000528028 NCR2O95944 276 aa12.03□□□□□ -0.48
ZNF250-205ENST00000528028 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
ZNF250-205ENST00000528028 IGKV3OR2-268A0A0C4DH90 116 aa12.02□□□□□ -0.49
ZNF250-205ENST00000528028 APCSP02743 223 aa12.02□□□□□ -0.49
ZNF250-205ENST00000528028 C15orf56Q8N910 161 aa12.02□□□□□ -0.49
ZNF250-205ENST00000528028 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
ZNF250-205ENST00000528028 RPL39LQ96EH5 51 aaKnown RBP12.02□□□□□ -0.49
ZNF250-205ENST00000528028 RNF185Q96GF1 192 aa12.02□□□□□ -0.49
ZNF250-205ENST00000528028 GAGE12HA6NDE8 117 aa12.01□□□□□ -0.49
ZNF250-205ENST00000528028 TMEM250H0YL14 139 aa12.01□□□□□ -0.49
ZNF250-205ENST00000528028 FOXA3P55318 350 aaPredicted RBP12.01□□□□□ -0.49
ZNF250-205ENST00000528028 CFAP161Q6P656 301 aa12.01□□□□□ -0.49
ZNF250-205ENST00000528028 SPACA4Q8TDM5 124 aa12.01□□□□□ -0.49
ZNF250-205ENST00000528028 H7C423 109 aa12□□□□□ -0.49
ZNF250-205ENST00000528028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
ZNF250-205ENST00000528028 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
ZNF250-205ENST00000528028 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
ZNF250-205ENST00000528028 GATCO43716 136 aaKnown RBP11.99□□□□□ -0.49
ZNF250-205ENST00000528028 RNASEKQ6P5S7 137 aaKnown RBP11.99□□□□□ -0.49
ZNF250-205ENST00000528028 UQCC3Q6UW78 93 aa11.99□□□□□ -0.49
ZNF250-205ENST00000528028 Q6ZRU5 148 aa11.99□□□□□ -0.49
ZNF250-205ENST00000528028 A8MWL6 223 aa11.98□□□□□ -0.49
ZNF250-205ENST00000528028 BLOC1S1P78537 153 aa11.98□□□□□ -0.49
ZNF250-205ENST00000528028 HIGD2BQ4VC39 106 aa11.98□□□□□ -0.49
ZNF250-205ENST00000528028 FAM231DQ6ZW35 169 aa11.98□□□□□ -0.49
ZNF250-205ENST00000528028 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
ZNF250-205ENST00000528028 TNXBP22105 4242 aa11.98□□□□□ -0.49
ZNF250-205ENST00000528028 FGF6P10767 208 aa11.97□□□□□ -0.49
ZNF250-205ENST00000528028 ZNF25P17030 456 aaPredicted RBP11.97□□□□□ -0.49
ZNF250-205ENST00000528028 COX6A2Q02221 97 aa11.97□□□□□ -0.49
ZNF250-205ENST00000528028 CT83Q5H943 113 aa11.97□□□□□ -0.49
ZNF250-205ENST00000528028 BORCS7Q96B45 105 aa11.97□□□□□ -0.49
ZNF250-205ENST00000528028 RPS10P46783 165 aaKnown RBP11.96□□□□□ -0.49
ZNF250-205ENST00000528028 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
ZNF250-205ENST00000528028 PLAC8Q9NZF1 115 aa11.96□□□□□ -0.49
ZNF250-205ENST00000528028 I3L3M4 83 aa11.95□□□□□ -0.5
ZNF250-205ENST00000528028 PHOX2AO14813 284 aa11.95□□□□□ -0.5
ZNF250-205ENST00000528028 CEBPGP53567 150 aa11.95□□□□□ -0.5
ZNF250-205ENST00000528028 GVQW2A0A096LPI5 108 aaPredicted RBP11.94□□□□□ -0.5
ZNF250-205ENST00000528028 TRBV6-5A0A0K0K1A5 114 aa11.94□□□□□ -0.5
ZNF250-205ENST00000528028 PMCHP20382 165 aa11.94□□□□□ -0.5
ZNF250-205ENST00000528028 LYPD6BQ8NI32 183 aa11.94□□□□□ -0.5
ZNF250-205ENST00000528028 TMEM101Q96IK0 257 aa11.94□□□□□ -0.5
ZNF250-205ENST00000528028 BTF3L4Q96K17 158 aa11.94□□□□□ -0.5
ZNF250-205ENST00000528028 NDUFS6O75380 124 aaKnown RBP11.93□□□□□ -0.5
ZNF250-205ENST00000528028 OR5A1Q8NGJ0 315 aa11.93□□□□□ -0.5
ZNF250-205ENST00000528028 C7orf33Q8WU49 177 aa11.93□□□□□ -0.5
ZNF250-205ENST00000528028 IGKV2-24A0A0C4DH68 120 aa11.92□□□□□ -0.5
ZNF250-205ENST00000528028 FAM231BA6NCW3 169 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms