RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 NCR2O95944 276 aa7.25□□□□□ -1.25
NR1H3-230ENST00000527949 NKX2-5P52952 324 aaPredicted RBP7.25□□□□□ -1.25
NR1H3-230ENST00000527949 COTL1Q14019 142 aa7.25□□□□□ -1.25
NR1H3-230ENST00000527949 TWIST1Q15672 202 aa7.25□□□□□ -1.25
NR1H3-230ENST00000527949 DGAT2L7PQ6IED9 249 aa7.25□□□□□ -1.25
NR1H3-230ENST00000527949 SMIM15Q7Z3B0 74 aa7.25□□□□□ -1.25
NR1H3-230ENST00000527949 GTSF1Q8WW33 167 aa7.25□□□□□ -1.25
NR1H3-230ENST00000527949 H7C423 109 aa7.24□□□□□ -1.25
NR1H3-230ENST00000527949 GAGE6Q13070 117 aa7.24□□□□□ -1.25
NR1H3-230ENST00000527949 LINC00269Q8N2A0 174 aa7.24□□□□□ -1.25
NR1H3-230ENST00000527949 GATD1Q8NB37 220 aa7.24□□□□□ -1.25
NR1H3-230ENST00000527949 C20orf203Q8NBC4 194 aa7.24□□□□□ -1.25
NR1H3-230ENST00000527949 CLRN3Q8NCR9 226 aa7.24□□□□□ -1.25
NR1H3-230ENST00000527949 CHAC1Q9BUX1 264 aa7.24□□□□□ -1.25
NR1H3-230ENST00000527949 GFRA4Q9GZZ7 299 aa7.24□□□□□ -1.25
NR1H3-230ENST00000527949 hCG_2014768A0A024R1R8 64 aa7.23□□□□□ -1.25
NR1H3-230ENST00000527949 USP17L23D6RBM5 183 aa7.23□□□□□ -1.25
NR1H3-230ENST00000527949 REG3AQ06141 175 aa7.23□□□□□ -1.25
NR1H3-230ENST00000527949 SMIM7Q9BQ49 75 aa7.23□□□□□ -1.25
NR1H3-230ENST00000527949 OSTCQ9NRP0 149 aa7.23□□□□□ -1.25
NR1H3-230ENST00000527949 TRBV6-5A0A0K0K1A5 114 aa7.22□□□□□ -1.25
NR1H3-230ENST00000527949 AMTP48728 403 aa7.22□□□□□ -1.25
NR1H3-230ENST00000527949 LINC01551Q86U37 167 aa7.22□□□□□ -1.25
NR1H3-230ENST00000527949 TSKUQ8WUA8 353 aa7.22□□□□□ -1.25
NR1H3-230ENST00000527949 EIF5A2Q9GZV4 153 aaKnown RBP7.22□□□□□ -1.25
NR1H3-230ENST00000527949 SRP19P09132 144 aaKnown RBP7.21□□□□□ -1.26
NR1H3-230ENST00000527949 FAM74A3Q4VXF1 159 aa7.21□□□□□ -1.26
NR1H3-230ENST00000527949 SCXQ7RTU7 201 aa7.21□□□□□ -1.26
NR1H3-230ENST00000527949 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.26
NR1H3-230ENST00000527949 BORCS7Q96B45 105 aa7.21□□□□□ -1.26
NR1H3-230ENST00000527949 IGLV4-60A0A075B6I1 120 aa7.2□□□□□ -1.26
NR1H3-230ENST00000527949 A0A1B0GUT8 65 aa7.2□□□□□ -1.26
NR1H3-230ENST00000527949 ZNF727A8MUV8 499 aa7.2□□□□□ -1.26
NR1H3-230ENST00000527949 UBE2L6O14933 153 aa7.2□□□□□ -1.26
NR1H3-230ENST00000527949 HLA-DQA1P01909 254 aa7.2□□□□□ -1.26
NR1H3-230ENST00000527949 PRSS1P07477 247 aa7.2□□□□□ -1.26
NR1H3-230ENST00000527949 CNBPP62633 177 aaKnown RBP7.2□□□□□ -1.26
NR1H3-230ENST00000527949 TMEM191AQ9H0A3 160 aa7.2□□□□□ -1.26
NR1H3-230ENST00000527949 SMDT1Q9H4I9 107 aa7.2□□□□□ -1.26
NR1H3-230ENST00000527949 DNAH8Q96JB1 4490 aa7.2□□□□□ -1.26
NR1H3-230ENST00000527949 SDHAF1A6NFY7 115 aa7.19□□□□□ -1.26
NR1H3-230ENST00000527949 HIGD1CA8MV81 97 aa7.19□□□□□ -1.26
NR1H3-230ENST00000527949 ZNF25P17030 456 aaPredicted RBP7.19□□□□□ -1.26
NR1H3-230ENST00000527949 TRAV26-2A0A0B4J265 109 aa7.18□□□□□ -1.26
NR1H3-230ENST00000527949 I3L3M4 83 aa7.18□□□□□ -1.26
NR1H3-230ENST00000527949 APCSP02743 223 aa7.18□□□□□ -1.26
NR1H3-230ENST00000527949 LINC01620Q4KN68 170 aa7.18□□□□□ -1.26
NR1H3-230ENST00000527949 CLPSL2Q6UWE3 100 aa7.18□□□□□ -1.26
NR1H3-230ENST00000527949 CIRBP-AS1Q8TBR5 109 aa7.18□□□□□ -1.26
NR1H3-230ENST00000527949 RPL39LQ96EH5 51 aaKnown RBP7.18□□□□□ -1.26
NR1H3-230ENST00000527949 MRAP2Q96G30 205 aa7.18□□□□□ -1.26
NR1H3-230ENST00000527949 TRBV27A0A0K0K1C4 114 aa7.17□□□□□ -1.26
NR1H3-230ENST00000527949 PPP1R17O96001 155 aa7.17□□□□□ -1.26
NR1H3-230ENST00000527949 ESDP10768 282 aa7.17□□□□□ -1.26
NR1H3-230ENST00000527949 CEBPGP53567 150 aa7.17□□□□□ -1.26
NR1H3-230ENST00000527949 POLR2KP53803 58 aaKnown RBP7.17□□□□□ -1.26
NR1H3-230ENST00000527949 CIRBPQ14011 172 aaKnown RBP7.17□□□□□ -1.26
NR1H3-230ENST00000527949 TMEM241Q24JQ0 296 aa7.17□□□□□ -1.26
NR1H3-230ENST00000527949 CFAP161Q6P656 301 aa7.17□□□□□ -1.26
NR1H3-230ENST00000527949 ISOC2Q96AB3 205 aa7.17□□□□□ -1.26
NR1H3-230ENST00000527949 V9GYV3 84 aa7.17□□□□□ -1.26
NR1H3-230ENST00000527949 A0A1B0GVG6 124 aa7.16□□□□□ -1.26
NR1H3-230ENST00000527949 RAB4AP20338 218 aa7.16□□□□□ -1.26
NR1H3-230ENST00000527949 KRTAP10-4P60372 401 aaPredicted RBP7.16□□□□□ -1.26
NR1H3-230ENST00000527949 RIGQ13278 110 aa7.16□□□□□ -1.26
NR1H3-230ENST00000527949 AMMECR1LQ6DCA0 310 aa7.16□□□□□ -1.26
NR1H3-230ENST00000527949 SDIM1Q6ZPB5 146 aa7.16□□□□□ -1.26
NR1H3-230ENST00000527949 RNF185Q96GF1 192 aa7.16□□□□□ -1.26
NR1H3-230ENST00000527949 ST20Q9HBF5 79 aa7.16□□□□□ -1.26
NR1H3-230ENST00000527949 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
NR1H3-230ENST00000527949 IGLV10-54A0A075B6I4 117 aa7.15□□□□□ -1.26
NR1H3-230ENST00000527949 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.15□□□□□ -1.26
NR1H3-230ENST00000527949 A0A1B0GW15 77 aa7.15□□□□□ -1.26
NR1H3-230ENST00000527949 FGF6P10767 208 aa7.15□□□□□ -1.26
NR1H3-230ENST00000527949 PMCHP20382 165 aa7.15□□□□□ -1.26
NR1H3-230ENST00000527949 RPL23P62829 140 aaKnown RBP7.15□□□□□ -1.26
NR1H3-230ENST00000527949 PEA15Q15121 130 aa7.15□□□□□ -1.26
NR1H3-230ENST00000527949 MRPL52Q86TS9 123 aaKnown RBP7.15□□□□□ -1.26
NR1H3-230ENST00000527949 NAT8Q9UHE5 227 aa7.15□□□□□ -1.26
NR1H3-230ENST00000527949 NAT8BQ9UHF3 227 aa7.15□□□□□ -1.26
NR1H3-230ENST00000527949 hDV102S1A0JD36 115 aa7.14□□□□□ -1.27
NR1H3-230ENST00000527949 TSHBP01222 138 aa7.14□□□□□ -1.27
NR1H3-230ENST00000527949 NUP35Q8NFH5 326 aa7.14□□□□□ -1.27
NR1H3-230ENST00000527949 OR5A1Q8NGJ0 315 aa7.14□□□□□ -1.27
NR1H3-230ENST00000527949 IGHV3-64A0A075B6Q5 118 aa7.13□□□□□ -1.27
NR1H3-230ENST00000527949 SMIM27A0A1W2PRY6 76 aa7.13□□□□□ -1.27
NR1H3-230ENST00000527949 PPP1R2P9O14990 202 aa7.13□□□□□ -1.27
NR1H3-230ENST00000527949 RPL32P62910 135 aaKnown RBP7.13□□□□□ -1.27
NR1H3-230ENST00000527949 SMAGPQ0VAQ4 97 aa7.13□□□□□ -1.27
NR1H3-230ENST00000527949 C15orf56Q8N910 161 aa7.13□□□□□ -1.27
NR1H3-230ENST00000527949 CHCHD10Q8WYQ3 142 aaPredicted RBP7.13□□□□□ -1.27
NR1H3-230ENST00000527949 TMEM101Q96IK0 257 aa7.13□□□□□ -1.27
NR1H3-230ENST00000527949 BTF3L4Q96K17 158 aa7.13□□□□□ -1.27
NR1H3-230ENST00000527949 CSDC2Q9Y534 153 aaKnown RBP7.13□□□□□ -1.27
NR1H3-230ENST00000527949 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
NR1H3-230ENST00000527949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.12□□□□□ -1.27
NR1H3-230ENST00000527949 GVQW2A0A096LPI5 108 aaPredicted RBP7.12□□□□□ -1.27
NR1H3-230ENST00000527949 IGKV2-29A2NJV5 120 aaPredicted RBP7.12□□□□□ -1.27
NR1H3-230ENST00000527949 LINC00862A6NCI5 91 aa7.12□□□□□ -1.27
NR1H3-230ENST00000527949 GAGE12HA6NDE8 117 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms