RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 NDUFC1O43677 76 aa1.83□□□□□ -2.12
USP47-206ENST00000525367 SNRNP200O75643 2136 aaKnown RBP1.83□□□□□ -2.12
USP47-206ENST00000525367 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
USP47-206ENST00000525367 NDUFA4L2Q9NRX3 87 aa1.83□□□□□ -2.12
USP47-206ENST00000525367 PRO1854Q9UHT4 67 aa1.83□□□□□ -2.12
USP47-206ENST00000525367 V9GYH0 126 aa1.83□□□□□ -2.12
USP47-206ENST00000525367 SCRIBQ14160 1630 aa1.82□□□□□ -2.12
USP47-206ENST00000525367 COX6CP09669 75 aa1.82□□□□□ -2.12
USP47-206ENST00000525367 ASIPP42127 132 aa1.82□□□□□ -2.12
USP47-206ENST00000525367 BAGE3Q86Y29 109 aa1.82□□□□□ -2.12
USP47-206ENST00000525367 WFDC6Q9BQY6 131 aa1.82□□□□□ -2.12
USP47-206ENST00000525367 TMEM170BQ5T4T1 132 aa1.81□□□□□ -2.12
USP47-206ENST00000525367 ADGRL2O95490 1459 aa1.81□□□□□ -2.12
USP47-206ENST00000525367 MAGI1Q96QZ7 1491 aaPredicted RBP1.81□□□□□ -2.12
USP47-206ENST00000525367 ABCA4P78363 2273 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 CC2D2AQ9P2K1 1620 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 F2Z2F3 143 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 SFT2D2O95562 160 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 IGLC1P0CG04 106 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 TRAPPC2P0DI81 140 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 TRAPPC2BP0DI82 140 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 CCL18P55774 89 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 PLAC4Q8WY50 150 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 FAIMQ9NVQ4 179 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 TECTAO75443 2155 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 ANKRD36BQ8N2N9 1353 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 RB1CC1Q8TDY2 1594 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 PATJQ8NI35 1801 aa1.8□□□□□ -2.12
USP47-206ENST00000525367 TRGV1A0A0A0MS02 117 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 TRAV22A0A0B4J277 110 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 HMGN4O00479 90 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 GYPAP02724 150 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 PRB1P04280 392 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 ACYP2P14621 99 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 FXYD6P3P58550 94 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 UBE2D3P61077 147 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 UBE2D2P62837 147 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 C6orf52Q5T4I8 152 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 Q5VV11 94 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 C9orf62Q8N4C0 152 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 Q8N6K4 173 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 Q96NJ1 140 aa1.79□□□□□ -2.12
USP47-206ENST00000525367 BAZ1AQ9NRL2 1556 aaPredicted RBP1.79□□□□□ -2.12
USP47-206ENST00000525367 AFDNP55196 1824 aaKnown RBP1.79□□□□□ -2.12
USP47-206ENST00000525367 MED13Q9UHV7 2174 aa1.78□□□□□ -2.12
USP47-206ENST00000525367 MRC1P22897 1456 aa1.78□□□□□ -2.12
USP47-206ENST00000525367 RAPGEF2Q9Y4G8 1499 aa1.78□□□□□ -2.12
USP47-206ENST00000525367 CDC42SE2Q9NRR3 84 aa1.78□□□□□ -2.12
USP47-206ENST00000525367 PHIPQ8WWQ0 1821 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 A0A096LNT2 108 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 CTXND1A0A1B0GTU2 59 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 F8VRH5 84 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 M0R135 149 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 FAUP35544 74 aaKnown RBP1.77□□□□□ -2.13
USP47-206ENST00000525367 SERP2Q8N6R1 65 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 AMELXQ99217 191 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 TRGV9Q99603 122 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 MYH8P13535 1937 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 AKAP12Q02952 1782 aa1.77□□□□□ -2.13
USP47-206ENST00000525367 PRRC2BQ5JSZ5 2229 aaKnown RBP1.76□□□□□ -2.13
USP47-206ENST00000525367 ASCC3Q8N3C0 2202 aaKnown RBP1.76□□□□□ -2.13
USP47-206ENST00000525367 PRDM15P57071 1507 aaPredicted RBP1.76□□□□□ -2.13
USP47-206ENST00000525367 TRAV1-2A0A0B4J238 106 aa1.76□□□□□ -2.13
USP47-206ENST00000525367 APOC3P02656 99 aa1.76□□□□□ -2.13
USP47-206ENST00000525367 ARL14EPLP0DKL9 152 aa1.76□□□□□ -2.13
USP47-206ENST00000525367 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.76□□□□□ -2.13
USP47-206ENST00000525367 VMO1Q7Z5L0 202 aa1.76□□□□□ -2.13
USP47-206ENST00000525367 BAGE2Q86Y30 109 aa1.76□□□□□ -2.13
USP47-206ENST00000525367 ESPL1Q14674 2120 aa1.76□□□□□ -2.13
USP47-206ENST00000525367 MED12Q93074 2177 aa1.75□□□□□ -2.13
USP47-206ENST00000525367 TRBV7-7A0A0K0K1E9 115 aa1.75□□□□□ -2.13
USP47-206ENST00000525367 TMEM14DPA8MWL7 114 aa1.75□□□□□ -2.13
USP47-206ENST00000525367 LY6G6CO95867 125 aa1.75□□□□□ -2.13
USP47-206ENST00000525367 SMIM4Q8WVI0 70 aa1.75□□□□□ -2.13
USP47-206ENST00000525367 BPESC1Q9GZL8 116 aa1.75□□□□□ -2.13
USP47-206ENST00000525367 NPVFQ9HCQ7 196 aa1.75□□□□□ -2.13
USP47-206ENST00000525367 SHROOM2Q13796 1616 aa1.75□□□□□ -2.13
USP47-206ENST00000525367 PLEKHH2Q8IVE3 1493 aa1.75□□□□□ -2.13
USP47-206ENST00000525367 DLG5Q8TDM6 1919 aa1.74□□□□□ -2.13
USP47-206ENST00000525367 DOCK1Q14185 1865 aa1.74□□□□□ -2.13
USP47-206ENST00000525367 IGLC7A0M8Q6 106 aa1.74□□□□□ -2.13
USP47-206ENST00000525367 UQCR11O14957 56 aa1.74□□□□□ -2.13
USP47-206ENST00000525367 RPL37P61927 97 aaKnown RBP1.74□□□□□ -2.13
USP47-206ENST00000525367 SFTA2Q6UW10 78 aa1.74□□□□□ -2.13
USP47-206ENST00000525367 SMIM11BQ8TCY0 68 aa1.74□□□□□ -2.13
USP47-206ENST00000525367 NXT2Q9NPJ8 142 aaKnown RBP1.74□□□□□ -2.13
USP47-206ENST00000525367 CACFD1Q9UGQ2 172 aa1.74□□□□□ -2.13
USP47-206ENST00000525367 NCOA6Q14686 2063 aaPredicted RBP1.73□□□□□ -2.13
USP47-206ENST00000525367 PARP14Q460N5 1801 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 UQCRHLA0A096LP55 91 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 SPINT3P49223 89 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 PYY3Q5JQD4 70 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 LINC01558Q9Y6Z2 57 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 ARL2-SNX15V9GYD0 113 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 ANKRD26Q9UPS8 1709 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 FLG2Q5D862 2391 aaPredicted RBP1.73□□□□□ -2.13
USP47-206ENST00000525367 SPTBP11277 2137 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 TOPAZ1Q8N9V7 1692 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 PLXNA1Q9UIW2 1896 aa1.73□□□□□ -2.13
USP47-206ENST00000525367 SORL1Q92673 2214 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms