RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 TRGV2A0A075B6R0 118 aa13.78□□□□□ -0.2
TM9SF1-203ENST00000524835 TRBV10-1A0A0K0K1A3 114 aa13.78□□□□□ -0.2
TM9SF1-203ENST00000524835 PCP2Q8IVA1 136 aa13.78□□□□□ -0.2
TM9SF1-203ENST00000524835 SLC25A29Q8N8R3 303 aa13.77□□□□□ -0.21
TM9SF1-203ENST00000524835 CHCHD7Q9BUK0 85 aa13.77□□□□□ -0.21
TM9SF1-203ENST00000524835 IGLV4-69A0A075B6H9 119 aa13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 TRBV7-3A0A075B6L6 115 aa13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 IGHV3-38A0A0C4DH36 116 aa13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 DLEU1O43261 78 aa13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 BATFQ16520 125 aa13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 PRIMA1Q86XR5 153 aa13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 PHLDA1Q8WV24 401 aaPredicted RBP13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 OPRPNQ99935 248 aaPredicted RBP13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 EMP1P54849 157 aa13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 ZNRF2Q8NHG8 242 aa13.76□□□□□ -0.21
TM9SF1-203ENST00000524835 SMIM9A6NGZ8 99 aa13.75□□□□□ -0.21
TM9SF1-203ENST00000524835 CIDEAO60543 219 aa13.75□□□□□ -0.21
TM9SF1-203ENST00000524835 PYGO1Q9Y3Y4 419 aa13.75□□□□□ -0.21
TM9SF1-203ENST00000524835 APOC4P55056 127 aa13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 COTL1Q14019 142 aa13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 LINC00612Q8N6U2 182 aa13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 STAB1Q9NY15 2570 aa13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 IGLV4-3A0A075B6K6 122 aa13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 HINT1P49773 126 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 RPL36AP83881 106 aaKnown RBP13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 C3orf56Q8N813 242 aa13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 RPL36ALQ969Q0 106 aaKnown RBP13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 FAM104AQ969W3 186 aa13.74□□□□□ -0.21
TM9SF1-203ENST00000524835 A0A1B0GV90 55 aa13.73□□□□□ -0.21
TM9SF1-203ENST00000524835 C11orf86A6NJI1 115 aa13.72□□□□□ -0.21
TM9SF1-203ENST00000524835 DEFB135Q30KP9 77 aa13.72□□□□□ -0.21
TM9SF1-203ENST00000524835 SHISA2Q6UWI4 295 aa13.72□□□□□ -0.21
TM9SF1-203ENST00000524835 TTTY13Q9BZ97 58 aa13.72□□□□□ -0.21
TM9SF1-203ENST00000524835 TRBV6-4A0A1B0GX49 114 aa13.72□□□□□ -0.21
TM9SF1-203ENST00000524835 UBE2D3P61077 147 aa13.72□□□□□ -0.21
TM9SF1-203ENST00000524835 UBE2D2P62837 147 aa13.72□□□□□ -0.21
TM9SF1-203ENST00000524835 MPV17L2Q567V2 206 aa13.72□□□□□ -0.21
TM9SF1-203ENST00000524835 NBEAL2Q6ZNJ1 2754 aa13.72□□□□□ -0.21
TM9SF1-203ENST00000524835 PAPPA-AS1Q5QFB9 102 aa13.71□□□□□ -0.21
TM9SF1-203ENST00000524835 ZMAT5Q9UDW3 170 aaKnown RBP13.71□□□□□ -0.21
TM9SF1-203ENST00000524835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 IGKV2-29A2NJV5 120 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 IGHV4-30-4P0DP06 118 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 FHL2Q14192 279 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 OXLD1Q5BKU9 147 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 CEMP1Q6PRD7 247 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 DAZ4Q86SG3 579 aaKnown RBP13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 DAZ3Q9NR90 486 aaKnown RBP13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 UBE2D4Q9Y2X8 147 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 GAGE12JA6NER3 117 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 SIVA1O15304 175 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 NPSP0C0P6 89 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 GAGE1Q13065 139 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 GAGE4Q13068 117 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 GAGE5Q13069 117 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 GAGE13Q4V321 117 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 SPANXA1Q9NS26 97 aa13.7□□□□□ -0.22
TM9SF1-203ENST00000524835 TRGV4A0A0C4DH28 118 aa13.69□□□□□ -0.22
TM9SF1-203ENST00000524835 COL5A1-AS1Q5SY13 56 aa13.69□□□□□ -0.22
TM9SF1-203ENST00000524835 MAST4O15021 2626 aa13.69□□□□□ -0.22
TM9SF1-203ENST00000524835 DEFB130BP0DP73 79 aa13.68□□□□□ -0.22
TM9SF1-203ENST00000524835 DEFB130AP0DP74 79 aa13.68□□□□□ -0.22
TM9SF1-203ENST00000524835 AMELXQ99217 191 aa13.68□□□□□ -0.22
TM9SF1-203ENST00000524835 VCX2Q9H322 139 aa13.68□□□□□ -0.22
TM9SF1-203ENST00000524835 E9PLD3 99 aa13.68□□□□□ -0.22
TM9SF1-203ENST00000524835 CRYBA4P53673 196 aa13.68□□□□□ -0.22
TM9SF1-203ENST00000524835 BVES-AS1Q5T3Y7 98 aa13.68□□□□□ -0.22
TM9SF1-203ENST00000524835 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
TM9SF1-203ENST00000524835 LOC100131303A0A0U1RQF7 123 aa13.67□□□□□ -0.22
TM9SF1-203ENST00000524835 C12orf54Q6X4T0 127 aa13.67□□□□□ -0.22
TM9SF1-203ENST00000524835 NTM-AS1Q6ZSK4 140 aa13.67□□□□□ -0.22
TM9SF1-203ENST00000524835 OR11H2Q8NH07 326 aa13.67□□□□□ -0.22
TM9SF1-203ENST00000524835 TRAV8-6A0A0B4J262 113 aa13.66□□□□□ -0.22
TM9SF1-203ENST00000524835 KRTAP10-11P60412 298 aa13.66□□□□□ -0.22
TM9SF1-203ENST00000524835 TMEM97Q5BJF2 176 aa13.66□□□□□ -0.22
TM9SF1-203ENST00000524835 MAPKAPK5-AS1Q8N8E1 139 aa13.66□□□□□ -0.22
TM9SF1-203ENST00000524835 CHAC1Q9BUX1 264 aa13.66□□□□□ -0.22
TM9SF1-203ENST00000524835 EGFEM1PQ0D2K5 195 aa13.65□□□□□ -0.22
TM9SF1-203ENST00000524835 FAM222AQ5U5X8 452 aa13.65□□□□□ -0.22
TM9SF1-203ENST00000524835 PRADC1Q9BSG0 188 aa13.65□□□□□ -0.22
TM9SF1-203ENST00000524835 IGHV4-28A0A0C4DH34 117 aa13.64□□□□□ -0.23
TM9SF1-203ENST00000524835 LYRM9A8MSI8 78 aa13.64□□□□□ -0.23
TM9SF1-203ENST00000524835 LINC00694P0DN24 101 aa13.64□□□□□ -0.23
TM9SF1-203ENST00000524835 TIMM21Q9BVV7 248 aa13.64□□□□□ -0.23
TM9SF1-203ENST00000524835 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
TM9SF1-203ENST00000524835 Q6ZUT4 128 aa13.64□□□□□ -0.23
TM9SF1-203ENST00000524835 HIGD1BQ9P298 99 aa13.64□□□□□ -0.23
TM9SF1-203ENST00000524835 PKD1L1Q8TDX9 2849 aa13.64□□□□□ -0.23
TM9SF1-203ENST00000524835 RNASE13Q5GAN3 156 aaKnown RBP13.63□□□□□ -0.23
TM9SF1-203ENST00000524835 SBSPONQ8IVN8 264 aa13.63□□□□□ -0.23
TM9SF1-203ENST00000524835 Q8NAQ8 132 aa13.63□□□□□ -0.23
TM9SF1-203ENST00000524835 RNF183Q96D59 192 aa13.63□□□□□ -0.23
TM9SF1-203ENST00000524835 CMYA5Q8N3K9 4069 aa13.63□□□□□ -0.23
TM9SF1-203ENST00000524835 A0A0J9YXV3 536 aa13.62□□□□□ -0.23
TM9SF1-203ENST00000524835 DEFB4AO15263 64 aa13.62□□□□□ -0.23
TM9SF1-203ENST00000524835 TMEM170BQ5T4T1 132 aa13.62□□□□□ -0.23
TM9SF1-203ENST00000524835 GTSF1LQ9H1H1 148 aa13.62□□□□□ -0.23
TM9SF1-203ENST00000524835 MIFP14174 115 aa13.62□□□□□ -0.23
TM9SF1-203ENST00000524835 MRPS36P82909 103 aaKnown RBP13.62□□□□□ -0.23
TM9SF1-203ENST00000524835 HSD52Q0P140 79 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms