RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 GAGE2EQ4V326 116 aa9.69□□□□□ -0.86
CAPN1-202ENST00000524773 GAGE2DQ9UEU5 116 aa9.69□□□□□ -0.86
CAPN1-202ENST00000524773 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.69□□□□□ -0.86
CAPN1-202ENST00000524773 IGKV2-29A2NJV5 120 aaPredicted RBP9.69□□□□□ -0.86
CAPN1-202ENST00000524773 FAM104AQ969W3 186 aa9.69□□□□□ -0.86
CAPN1-202ENST00000524773 RBMY1A1P0DJD3 496 aaKnown RBP9.68□□□□□ -0.86
CAPN1-202ENST00000524773 RBMY1CP0DJD4 496 aa9.68□□□□□ -0.86
CAPN1-202ENST00000524773 RBMY1FQ15415 496 aaKnown RBP9.68□□□□□ -0.86
CAPN1-202ENST00000524773 C15orf53Q8NAA6 179 aa9.68□□□□□ -0.86
CAPN1-202ENST00000524773 ODF3Q96PU9 254 aa9.68□□□□□ -0.86
CAPN1-202ENST00000524773 TIMM21Q9BVV7 248 aa9.68□□□□□ -0.86
CAPN1-202ENST00000524773 TLN2Q9Y4G6 2542 aa9.68□□□□□ -0.86
CAPN1-202ENST00000524773 TRBV7-9A0A0J9YWB2 115 aa9.68□□□□□ -0.86
CAPN1-202ENST00000524773 AVPP01185 164 aa9.68□□□□□ -0.86
CAPN1-202ENST00000524773 Q6ZSN1 163 aa9.68□□□□□ -0.86
CAPN1-202ENST00000524773 WNK1Q9H4A3 2382 aa9.67□□□□□ -0.86
CAPN1-202ENST00000524773 SYNJ2BPP57105 145 aa9.67□□□□□ -0.86
CAPN1-202ENST00000524773 C9orf85Q96MD7 179 aa9.67□□□□□ -0.86
CAPN1-202ENST00000524773 M0R2P5 195 aa9.67□□□□□ -0.86
CAPN1-202ENST00000524773 IGHG2P01859 326 aa9.67□□□□□ -0.86
CAPN1-202ENST00000524773 NDUFV3P56181 108 aaKnown RBP9.67□□□□□ -0.86
CAPN1-202ENST00000524773 ATXN8Q156A1 80 aa9.67□□□□□ -0.86
CAPN1-202ENST00000524773 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
CAPN1-202ENST00000524773 LITAFQ99732 161 aa9.67□□□□□ -0.86
CAPN1-202ENST00000524773 IGHV1OR15-1A0A075B7D0 117 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 I3L3M4 83 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 BRI3O95415 125 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 EPG5Q9HCE0 2579 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 DOPEY1Q5JWR5 2465 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 ID1P41134 155 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 CHD6Q8TD26 2715 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 H7C423 109 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 MAPK1IP1LQ8NDC0 245 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 USMG5Q96IX5 58 aa9.66□□□□□ -0.86
CAPN1-202ENST00000524773 NF1P21359 2839 aa9.65□□□□□ -0.86
CAPN1-202ENST00000524773 A0A0B4J2C4 111 aa9.65□□□□□ -0.86
CAPN1-202ENST00000524773 A0A0J9YX75 114 aa9.65□□□□□ -0.86
CAPN1-202ENST00000524773 TRBV6-5A0A0K0K1A5 114 aa9.65□□□□□ -0.86
CAPN1-202ENST00000524773 TMEM262E9PQX1 116 aa9.65□□□□□ -0.86
CAPN1-202ENST00000524773 GAGE5Q13069 117 aa9.65□□□□□ -0.86
CAPN1-202ENST00000524773 GAGE6Q13070 117 aa9.65□□□□□ -0.86
CAPN1-202ENST00000524773 NSUN5P1Q3KNT7 163 aa9.65□□□□□ -0.86
CAPN1-202ENST00000524773 H3BUA1 57 aa9.65□□□□□ -0.87
CAPN1-202ENST00000524773 RPL32P62910 135 aaKnown RBP9.65□□□□□ -0.87
CAPN1-202ENST00000524773 NRGNQ92686 78 aa9.65□□□□□ -0.87
CAPN1-202ENST00000524773 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.87
CAPN1-202ENST00000524773 JMJD1CQ15652 2540 aa9.64□□□□□ -0.87
CAPN1-202ENST00000524773 H3BMM0 161 aa9.64□□□□□ -0.87
CAPN1-202ENST00000524773 UBE2WQ96B02 151 aa9.64□□□□□ -0.87
CAPN1-202ENST00000524773 NBPF19A0A087WUL8 3843 aa9.64□□□□□ -0.87
CAPN1-202ENST00000524773 NDUFA7O95182 113 aa9.63□□□□□ -0.87
CAPN1-202ENST00000524773 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
CAPN1-202ENST00000524773 ZNF462Q96JM2 2506 aa9.63□□□□□ -0.87
CAPN1-202ENST00000524773 A6NDX4 124 aa9.63□□□□□ -0.87
CAPN1-202ENST00000524773 IGHV4-59P01825 116 aa9.63□□□□□ -0.87
CAPN1-202ENST00000524773 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
CAPN1-202ENST00000524773 FAM208BQ5VWN6 2430 aa9.62□□□□□ -0.87
CAPN1-202ENST00000524773 IGHV4-30-2A0A087WSY4 118 aa9.62□□□□□ -0.87
CAPN1-202ENST00000524773 IGLV1-40P01703 118 aa9.62□□□□□ -0.87
CAPN1-202ENST00000524773 RHOHQ15669 191 aa9.62□□□□□ -0.87
CAPN1-202ENST00000524773 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-202ENST00000524773 CHCHD5Q9BSY4 110 aa9.62□□□□□ -0.87
CAPN1-202ENST00000524773 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-202ENST00000524773 IFITM1P13164 125 aa9.62□□□□□ -0.87
CAPN1-202ENST00000524773 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
CAPN1-202ENST00000524773 PTPN13Q12923 2485 aa9.61□□□□□ -0.87
CAPN1-202ENST00000524773 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
CAPN1-202ENST00000524773 C18orf65Q6ZTR6 163 aa9.61□□□□□ -0.87
CAPN1-202ENST00000524773 LINC00467Q9BRT7 94 aa9.61□□□□□ -0.87
CAPN1-202ENST00000524773 CDKN2A-AS1Q9UH64 79 aa9.6□□□□□ -0.87
CAPN1-202ENST00000524773 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
CAPN1-202ENST00000524773 TEX15Q9BXT5 2789 aa9.6□□□□□ -0.87
CAPN1-202ENST00000524773 LRRK2Q5S007 2527 aa9.6□□□□□ -0.87
CAPN1-202ENST00000524773 IGHV1-58A0A0C4DH39 117 aa9.6□□□□□ -0.87
CAPN1-202ENST00000524773 SONP18583 2426 aaKnown RBP9.59□□□□□ -0.87
CAPN1-202ENST00000524773 TRBV30A0A0K0K1B3 111 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 PRB1P04280 392 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 COX6A2Q02221 97 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 SMIM20Q8N5G0 67 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 K7EQG2 157 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 GAGE7O76087 117 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 GAGE4Q13068 117 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 VSIG2Q96IQ7 327 aa9.59□□□□□ -0.87
CAPN1-202ENST00000524773 DEFB131AP59861 70 aa9.58□□□□□ -0.88
CAPN1-202ENST00000524773 MRPS36P82909 103 aaKnown RBP9.58□□□□□ -0.88
CAPN1-202ENST00000524773 CFHR3Q02985 330 aa9.58□□□□□ -0.88
CAPN1-202ENST00000524773 OXLD1Q5BKU9 147 aa9.58□□□□□ -0.88
CAPN1-202ENST00000524773 ABCA12Q86UK0 2595 aa9.58□□□□□ -0.88
CAPN1-202ENST00000524773 IGHV3OR16-12A0A075B7B8 117 aa9.57□□□□□ -0.88
CAPN1-202ENST00000524773 MIAQ16674 131 aa9.57□□□□□ -0.88
CAPN1-202ENST00000524773 Q8N2B8 174 aa9.57□□□□□ -0.88
CAPN1-202ENST00000524773 CHCHD7Q9BUK0 85 aa9.57□□□□□ -0.88
CAPN1-202ENST00000524773 RBMY1BA6NDE4 496 aaKnown RBP9.57□□□□□ -0.88
CAPN1-202ENST00000524773 RBMY1EA6NEQ0 496 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 333.2 ms