RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 ZNF415Q09FC8 603 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 FOXI1Q12951 378 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 Q6ZSN1 163 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 NAV2Q8IVL1 2488 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 C1QTNF4Q9BXJ3 329 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 TRBV20-1A0A075B6N2 111 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 PRB1P04280 392 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 MRPS36P82909 103 aaKnown RBP8.07□□□□□ -1.12
HDAC9-228ENST00000524023 CEMP1Q6PRD7 247 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-228ENST00000524023 PTH2Q96A98 100 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 SPXQ9BT56 116 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 MAP6D1Q9H9H5 199 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 USP24Q9UPU5 2620 aa8.06□□□□□ -1.12
HDAC9-228ENST00000524023 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-228ENST00000524023 IGHV3-30-3P0DP02 117 aa8.06□□□□□ -1.12
HDAC9-228ENST00000524023 KRTAP10-9P60411 292 aa8.06□□□□□ -1.12
HDAC9-228ENST00000524023 MUSTN1Q8IVN3 82 aa8.06□□□□□ -1.12
HDAC9-228ENST00000524023 ZNF418Q8TF45 676 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-228ENST00000524023 C4orf3Q8WVX3 66 aa8.06□□□□□ -1.12
HDAC9-228ENST00000524023 CHD6Q8TD26 2715 aa8.06□□□□□ -1.12
HDAC9-228ENST00000524023 A0A0J9YXY3 114 aa8.05□□□□□ -1.12
HDAC9-228ENST00000524023 C11orf72Q8NBR9 251 aa8.05□□□□□ -1.12
HDAC9-228ENST00000524023 TMEM263Q8WUH6 116 aaKnown RBP8.05□□□□□ -1.12
HDAC9-228ENST00000524023 CHCHD7Q9BUK0 85 aa8.05□□□□□ -1.12
HDAC9-228ENST00000524023 TIMM21Q9BVV7 248 aa8.05□□□□□ -1.12
HDAC9-228ENST00000524023 ZNF469Q96JG9 3925 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-228ENST00000524023 IGHV3-33P01772 117 aa8.05□□□□□ -1.12
HDAC9-228ENST00000524023 SCGB1C2P0DMR2 95 aa8.05□□□□□ -1.12
HDAC9-228ENST00000524023 RNASE13Q5GAN3 156 aaKnown RBP8.05□□□□□ -1.12
HDAC9-228ENST00000524023 KHDC1LQ5JSQ8 128 aa8.05□□□□□ -1.12
HDAC9-228ENST00000524023 LINC01587Q99440 93 aa8.05□□□□□ -1.12
HDAC9-228ENST00000524023 LINC00467Q9BRT7 94 aa8.05□□□□□ -1.12
HDAC9-228ENST00000524023 A0A0B4J2C4 111 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 SCGB1A1P11684 91 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 SMAGPQ0VAQ4 97 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 DEFB114Q30KQ6 69 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 DYNLRB2Q8TF09 96 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 RAX2Q96IS3 184 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 UBE2D4Q9Y2X8 147 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 TRAV8-3A0A0A6YYJ7 113 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 DEFB113Q30KQ7 82 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 SBSPONQ8IVN8 264 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 SPANXA1Q9NS26 97 aa8.04□□□□□ -1.12
HDAC9-228ENST00000524023 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-228ENST00000524023 IGHV1-58A0A0C4DH39 117 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 TINCRA0A1B0GVN0 87 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 IGKV2-29A2NJV5 120 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-228ENST00000524023 ADARB2-AS1A8MUL3 147 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 IGHV3-53P01767 116 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 BEAN1Q3B7T3 259 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 HIST2H2BDQ6DRA6 164 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 LITAFQ99732 161 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 ERG28Q9UKR5 140 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-228ENST00000524023 INSP01308 110 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 TEN1Q86WV5 123 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 DNAJC30Q96LL9 226 aa8.03□□□□□ -1.12
HDAC9-228ENST00000524023 TLN2Q9Y4G6 2542 aa8.02□□□□□ -1.12
HDAC9-228ENST00000524023 EPG5Q9HCE0 2579 aa8.02□□□□□ -1.13
HDAC9-228ENST00000524023 RS1O15537 224 aa8.02□□□□□ -1.13
HDAC9-228ENST00000524023 CARD19Q96LW7 228 aa8.02□□□□□ -1.13
HDAC9-228ENST00000524023 BBC3Q96PG8 261 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-228ENST00000524023 NF1P21359 2839 aa8.02□□□□□ -1.13
HDAC9-228ENST00000524023 APCP25054 2843 aa8.01□□□□□ -1.13
HDAC9-228ENST00000524023 IGHV3-38A0A0C4DH36 116 aa8.01□□□□□ -1.13
HDAC9-228ENST00000524023 Q6ZUT4 128 aa8.01□□□□□ -1.13
HDAC9-228ENST00000524023 LRRC75A-AS1Q8N1F1 130 aa8.01□□□□□ -1.13
HDAC9-228ENST00000524023 PPDPFLQ8WWR9 84 aa8.01□□□□□ -1.13
HDAC9-228ENST00000524023 VSIG2Q96IQ7 327 aa8.01□□□□□ -1.13
HDAC9-228ENST00000524023 Q96MF0 132 aa8.01□□□□□ -1.13
HDAC9-228ENST00000524023 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
HDAC9-228ENST00000524023 H7C2G1 150 aa8.01□□□□□ -1.13
HDAC9-228ENST00000524023 CDIP1Q9H305 208 aa8□□□□□ -1.13
HDAC9-228ENST00000524023 A8MZ25 164 aa8□□□□□ -1.13
HDAC9-228ENST00000524023 SPINK8P0C7L1 97 aa8□□□□□ -1.13
HDAC9-228ENST00000524023 ODF3L2Q3SX64 289 aa8□□□□□ -1.13
HDAC9-228ENST00000524023 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
HDAC9-228ENST00000524023 CLUHP3Q96NS8 147 aa8□□□□□ -1.13
HDAC9-228ENST00000524023 SPANXDQ9BXN6 97 aa8□□□□□ -1.13
HDAC9-228ENST00000524023 SPANXCQ9NY87 97 aa8□□□□□ -1.13
HDAC9-228ENST00000524023 XCL2Q9UBD3 114 aa8□□□□□ -1.13
HDAC9-228ENST00000524023 PRSS2P07478 247 aa7.99□□□□□ -1.13
HDAC9-228ENST00000524023 Q1RN00 199 aa7.99□□□□□ -1.13
HDAC9-228ENST00000524023 Q6ZSV7 163 aa7.99□□□□□ -1.13
HDAC9-228ENST00000524023 WNK1Q9H4A3 2382 aa7.99□□□□□ -1.13
HDAC9-228ENST00000524023 ITPR3Q14573 2671 aa7.99□□□□□ -1.13
HDAC9-228ENST00000524023 NBPF19A0A087WUL8 3843 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 SLC25A20O43772 301 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 FHL3Q13643 280 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 TMEM86BQ8N661 226 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 ANKRD29Q8N6D5 301 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 GEMIN7Q9H840 131 aaKnown RBP7.98□□□□□ -1.13
HDAC9-228ENST00000524023 M0QXV9 152 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 ZFAND6Q6FIF0 208 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 KRTAP1-3Q8IUG1 177 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 STHQ8IWL8 128 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 C1orf158Q8N1D5 194 aa7.98□□□□□ -1.13
HDAC9-228ENST00000524023 TRAV25A0A0B4J276 109 aa7.97□□□□□ -1.13
HDAC9-228ENST00000524023 TRBV30A0A0K0K1B3 111 aa7.97□□□□□ -1.13
HDAC9-228ENST00000524023 C9JAW5 83 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 254 ms