RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
CSMD1-210ENST00000521646 MUC2Q02817 5179 aa6.91□□□□□ -1.3
CSMD1-210ENST00000521646 A0A1B0GV50 99 aa6.91□□□□□ -1.3
CSMD1-210ENST00000521646 OR5AL1P0C617 328 aa6.91□□□□□ -1.3
CSMD1-210ENST00000521646 CST9LP1Q5W188 147 aa6.91□□□□□ -1.3
CSMD1-210ENST00000521646 SUMO4Q6EEV6 95 aa6.91□□□□□ -1.3
CSMD1-210ENST00000521646 PRSS3P2Q8NHM4 247 aa6.91□□□□□ -1.3
CSMD1-210ENST00000521646 LINC01600Q96MT4 127 aa6.91□□□□□ -1.3
CSMD1-210ENST00000521646 F5H697 171 aa6.9□□□□□ -1.3
CSMD1-210ENST00000521646 SMLR1H3BR10 107 aa6.9□□□□□ -1.3
CSMD1-210ENST00000521646 CXCL1P09341 107 aa6.9□□□□□ -1.3
CSMD1-210ENST00000521646 GIPP09681 153 aaPredicted RBP6.9□□□□□ -1.3
CSMD1-210ENST00000521646 KRTAP10-8P60410 259 aa6.9□□□□□ -1.3
CSMD1-210ENST00000521646 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
CSMD1-210ENST00000521646 RGS21Q2M5E4 152 aa6.9□□□□□ -1.3
CSMD1-210ENST00000521646 MED28Q9H204 178 aa6.9□□□□□ -1.3
CSMD1-210ENST00000521646 TRBV25-1A0A075B6N4 114 aa6.89□□□□□ -1.31
CSMD1-210ENST00000521646 IGHV3-64A0A075B6Q5 118 aa6.89□□□□□ -1.31
CSMD1-210ENST00000521646 A0A0D9SG52 128 aa6.89□□□□□ -1.31
CSMD1-210ENST00000521646 IGLC6P0CF74 106 aa6.89□□□□□ -1.31
CSMD1-210ENST00000521646 NKX2-5P52952 324 aaPredicted RBP6.89□□□□□ -1.31
CSMD1-210ENST00000521646 COX6A2Q02221 97 aa6.89□□□□□ -1.31
CSMD1-210ENST00000521646 AKR1C8PQ5T2L2 129 aa6.89□□□□□ -1.31
CSMD1-210ENST00000521646 NKX6-2Q9C056 277 aaPredicted RBP6.89□□□□□ -1.31
CSMD1-210ENST00000521646 IGHV1-24A0A0C4DH33 117 aa6.88□□□□□ -1.31
CSMD1-210ENST00000521646 HIGD2BQ4VC39 106 aa6.88□□□□□ -1.31
CSMD1-210ENST00000521646 SPANXN1Q5VSR9 72 aa6.88□□□□□ -1.31
CSMD1-210ENST00000521646 A0A096LNI7 61 aa6.87□□□□□ -1.31
CSMD1-210ENST00000521646 BORCS7-ASMTA0A0B4J1R7 106 aa6.87□□□□□ -1.31
CSMD1-210ENST00000521646 MGPP08493 103 aa6.87□□□□□ -1.31
CSMD1-210ENST00000521646 MALP21145 153 aa6.87□□□□□ -1.31
CSMD1-210ENST00000521646 CCL20P78556 96 aa6.87□□□□□ -1.31
CSMD1-210ENST00000521646 BAGE2Q86Y30 109 aa6.87□□□□□ -1.31
CSMD1-210ENST00000521646 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
CSMD1-210ENST00000521646 IGKV2-24A0A0C4DH68 120 aa6.86□□□□□ -1.31
CSMD1-210ENST00000521646 A0A0J9YXV3 536 aa6.86□□□□□ -1.31
CSMD1-210ENST00000521646 A0A1B0GUV1 79 aa6.86□□□□□ -1.31
CSMD1-210ENST00000521646 ARPC5O15511 151 aa6.86□□□□□ -1.31
CSMD1-210ENST00000521646 LYPD6BQ8NI32 183 aa6.86□□□□□ -1.31
CSMD1-210ENST00000521646 STOML3Q8TAV4 291 aa6.86□□□□□ -1.31
CSMD1-210ENST00000521646 MBD3L1Q8WWY6 194 aa6.86□□□□□ -1.31
CSMD1-210ENST00000521646 LINC00526Q96FQ7 95 aa6.86□□□□□ -1.31
CSMD1-210ENST00000521646 RNF185Q96GF1 192 aa6.86□□□□□ -1.31
CSMD1-210ENST00000521646 TRBV20OR9-2A0A075B6H5 130 aa6.85□□□□□ -1.31
CSMD1-210ENST00000521646 C19orf71A6NCJ1 209 aa6.85□□□□□ -1.31
CSMD1-210ENST00000521646 RPL35P42766 123 aaKnown RBP6.85□□□□□ -1.31
CSMD1-210ENST00000521646 SRSF9Q13242 221 aaKnown RBP eCLIP6.85□□□□□ -1.31
CSMD1-210ENST00000521646 MAJINQ3KP22 176 aa6.85□□□□□ -1.31
CSMD1-210ENST00000521646 SFT2D1Q8WV19 159 aa6.85□□□□□ -1.31
CSMD1-210ENST00000521646 AP1S3Q96PC3 154 aa6.85□□□□□ -1.31
CSMD1-210ENST00000521646 TCEAL7Q9BRU2 100 aa6.85□□□□□ -1.31
CSMD1-210ENST00000521646 TMEM243Q9BU79 118 aa6.85□□□□□ -1.31
CSMD1-210ENST00000521646 TRAV8-4A0A0B4J246 113 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 TRAV26-2A0A0B4J265 109 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 IGKV3OR2-268A0A0C4DH90 116 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 TRIAP1O43715 76 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 GAS8-AS1O95177 125 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 P01737 135 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 PKIAP61925 76 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 TMEM97Q5BJF2 176 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 TMUB2Q71RG4 321 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 FAM213BQ8TBF2 198 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 GTSF1Q8WW33 167 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 TPPP3Q9BW30 176 aa6.84□□□□□ -1.31
CSMD1-210ENST00000521646 RAB19A4D1S5 217 aa6.83□□□□□ -1.32
CSMD1-210ENST00000521646 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-210ENST00000521646 WDR73Q6P4I2 378 aa6.83□□□□□ -1.32
CSMD1-210ENST00000521646 STPG4Q8N801 248 aa6.83□□□□□ -1.32
CSMD1-210ENST00000521646 FER1L6-AS1Q8NA97 138 aa6.83□□□□□ -1.32
CSMD1-210ENST00000521646 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
CSMD1-210ENST00000521646 NDUFS6O75380 124 aaKnown RBP6.82□□□□□ -1.32
CSMD1-210ENST00000521646 RPS10P46783 165 aaKnown RBP6.82□□□□□ -1.32
CSMD1-210ENST00000521646 CENPWQ5EE01 88 aa6.82□□□□□ -1.32
CSMD1-210ENST00000521646 RASL11AQ6T310 242 aa6.82□□□□□ -1.32
CSMD1-210ENST00000521646 LYZL1Q6UWQ5 148 aa6.82□□□□□ -1.32
CSMD1-210ENST00000521646 GATD1Q8NB37 220 aa6.82□□□□□ -1.32
CSMD1-210ENST00000521646 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-210ENST00000521646 C11orf52Q96A22 123 aa6.82□□□□□ -1.32
CSMD1-210ENST00000521646 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
CSMD1-210ENST00000521646 PGLYRP4Q96LB8 373 aa6.82□□□□□ -1.32
CSMD1-210ENST00000521646 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-210ENST00000521646 GVQW2A0A096LPI5 108 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-210ENST00000521646 IGKV2-29A2NJV5 120 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-210ENST00000521646 S100A9P06702 114 aaKnown RBP6.81□□□□□ -1.32
CSMD1-210ENST00000521646 SMIM17P0DL12 118 aa6.81□□□□□ -1.32
CSMD1-210ENST00000521646 OR2D3Q8NGH3 330 aa6.81□□□□□ -1.32
CSMD1-210ENST00000521646 NIT2Q9NQR4 276 aa6.81□□□□□ -1.32
CSMD1-210ENST00000521646 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.8□□□□□ -1.32
CSMD1-210ENST00000521646 H7C1H1 209 aa6.8□□□□□ -1.32
CSMD1-210ENST00000521646 NTF3P20783 257 aa6.8□□□□□ -1.32
CSMD1-210ENST00000521646 AMTP48728 403 aa6.8□□□□□ -1.32
CSMD1-210ENST00000521646 KCNRGQ8N5I3 272 aa6.8□□□□□ -1.32
CSMD1-210ENST00000521646 C7orf33Q8WU49 177 aa6.8□□□□□ -1.32
CSMD1-210ENST00000521646 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
CSMD1-210ENST00000521646 SULT1A2P50226 295 aa6.79□□□□□ -1.32
CSMD1-210ENST00000521646 A0A1W2PNN7 141 aa6.78□□□□□ -1.32
CSMD1-210ENST00000521646 CTRLP40313 264 aa6.78□□□□□ -1.32
CSMD1-210ENST00000521646 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-210ENST00000521646 DPH3P1Q9H4G8 78 aa6.78□□□□□ -1.32
CSMD1-210ENST00000521646 GNG13Q9P2W3 67 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms