RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 C1orf158Q8N1D5 194 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 STPG4Q8N801 248 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 C16orf74Q96GX8 76 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 AGRNO00468 2067 aa4.84□□□□□ -1.64
CTNNA1-228ENST00000521640 SVEP1Q4LDE5 3571 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 TRAV4A0A0B4J268 109 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 A6NDN8 102 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 C11orf86A6NJI1 115 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 CRLF1O75462 422 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 GCSHP23434 173 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 NMUP48645 174 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 HINT1P49773 126 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 SMAGPQ0VAQ4 97 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 BATFQ16520 125 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 C11orf44Q8N8P7 122 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 OVOL2Q9BRP0 275 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 TMEM208Q9BTX3 173 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 TIMM21Q9BVV7 248 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 CST9LQ9H4G1 147 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 SPANXA1Q9NS26 97 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 TNFRSF18Q9Y5U5 241 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 COX11Q9Y6N1 276 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 TLN2Q9Y4G6 2542 aa4.83□□□□□ -1.64
CTNNA1-228ENST00000521640 HIVEP2P31629 2446 aa4.82□□□□□ -1.64
CTNNA1-228ENST00000521640 P0DMU3 169 aa4.82□□□□□ -1.64
CTNNA1-228ENST00000521640 FAM231AP0DMU4 169 aa4.82□□□□□ -1.64
CTNNA1-228ENST00000521640 FAM231CP0DMU5 169 aa4.82□□□□□ -1.64
CTNNA1-228ENST00000521640 C9orf66Q5T8R8 295 aa4.82□□□□□ -1.64
CTNNA1-228ENST00000521640 OR11H2Q8NH07 326 aa4.82□□□□□ -1.64
CTNNA1-228ENST00000521640 XCL2Q9UBD3 114 aa4.82□□□□□ -1.64
CTNNA1-228ENST00000521640 SONP18583 2426 aaKnown RBP4.82□□□□□ -1.64
CTNNA1-228ENST00000521640 MAP1AP78559 2803 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 IGLV4-69A0A075B6H9 119 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 TRBV25-1A0A075B6N4 114 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 IGKV2D-26A0A0A0MRZ7 120 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 SMIM9A6NGZ8 99 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 GIG44P09565 113 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 AZU1P20160 251 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 MRPS36P82909 103 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 NEGR1Q7Z3B1 354 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 GTSCR1Q86UQ5 136 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 PCP2Q8IVA1 136 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 CSNK1G2-AS1Q8NCQ2 148 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 AMELXQ99217 191 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 SMR3AQ99954 134 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 CHAC1Q9BUX1 264 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 TM2D2Q9BX73 214 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 NACAE9PAV3 2078 aa4.81□□□□□ -1.64
CTNNA1-228ENST00000521640 IGLV4-3A0A075B6K6 122 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 MYMXA0A1B0GTQ4 84 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 TRBV6-4A0A1B0GX49 114 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 GAGE12BA1L429 117 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 GAGE12HA6NDE8 117 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 INAFM1C9JVW0 142 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 H3BRM9 83 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 TAX1BP3O14907 124 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 HTN1P15515 57 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 ZNF25P17030 456 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 KRTAP10-3P60369 221 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 RPL39P62891 51 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 RPL36AP83881 106 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 COTL1Q14019 142 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 RRN3P1Q2M238 152 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 DAZ4Q86SG3 579 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 OR4C5Q8NGB2 326 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 KIR2DL5BQ8NHK3 375 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 RPL36ALQ969Q0 106 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 CITED1Q99966 193 aa4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 DAZ3Q9NR90 486 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 MRPL16Q9NX20 251 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 CSDC2Q9Y534 153 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-228ENST00000521640 ZFHX3Q15911 3703 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 ITPR2Q14571 2701 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 TRBV7-3A0A075B6L6 115 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 TRGV1A0A0A0MS02 117 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 PLAC8L1A1L4L8 177 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 H7C423 109 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 K7EQD1 137 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 LINC00612Q8N6U2 182 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 PRADC1Q9BSG0 188 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 CHCHD7Q9BUK0 85 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 GTSF1LQ9H1H1 148 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 VCX2Q9H322 139 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 TP73-AS1Q9UF72 201 aa4.79□□□□□ -1.64
CTNNA1-228ENST00000521640 SORL1Q92673 2214 aa4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 ANK3Q12955 4377 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 FASNP49327 2511 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 UBE2D3P61077 147 aa4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 UBE2D2P62837 147 aa4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 UBE2V1Q13404 147 aa4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 CEND1Q8N111 149 aa4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 WFDC9Q8NEX5 89 aa4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 SPANXB1Q9NS25 103 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
CTNNA1-228ENST00000521640 ACANP16112 2415 aa4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 TRAV8-6A0A0B4J262 113 aa4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 TINCRA0A1B0GVN0 87 aa4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 A0A1B0GWB2 263 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms