RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 TMEM208Q9BTX3 173 aa1.96□□□□□ -2.1
MCF2-208ENST00000519895 DPH3P1Q9H4G8 78 aa1.96□□□□□ -2.1
MCF2-208ENST00000519895 IGHV3OR16-13A0A075B7E8 117 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 IGHV3-74A0A0B4J1X5 117 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 F6UB75 175 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 K7EQD1 137 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 M0R2Z0 102 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 P01737 135 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 CRYGDP07320 174 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 ZNF25P17030 456 aaPredicted RBP1.95□□□□□ -2.1
MCF2-208ENST00000519895 CCL18P55774 89 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 LINC00315P59091 139 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 SRSF9Q13242 221 aaKnown RBP eCLIP1.95□□□□□ -2.1
MCF2-208ENST00000519895 RIGQ13278 110 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 RHEBQ15382 184 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 CENPWQ5EE01 88 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 LINC01551Q86U37 167 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 PCNPQ8WW12 178 aaKnown RBP1.95□□□□□ -2.1
MCF2-208ENST00000519895 PACRGQ96M98 296 aaPredicted RBP1.95□□□□□ -2.1
MCF2-208ENST00000519895 TRBV24-1A0A075B6N3 115 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 TRAV12-3A0A0B4J271 114 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 A0A1B0GXF2 115 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 ZNF705GA8MUZ8 300 aaPredicted RBP1.95□□□□□ -2.1
MCF2-208ENST00000519895 ZNF80P51504 273 aaPredicted RBP1.95□□□□□ -2.1
MCF2-208ENST00000519895 UBE2D3P61077 147 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 UBE2D2P62837 147 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 Q0VG73 95 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 IQCJQ1A5X6 159 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 SOHLH1Q5JUK2 328 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 NEGR1Q7Z3B1 354 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 MRPL52Q86TS9 123 aaKnown RBP1.95□□□□□ -2.1
MCF2-208ENST00000519895 FER1L6-AS1Q8NA97 138 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 ZNRF2Q8NHG8 242 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 VSIG2Q96IQ7 327 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 GNG13Q9P2W3 67 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 C11orf21Q9P2W6 132 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 NAT8BQ9UHF3 227 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 CELA1Q9UNI1 258 aa1.95□□□□□ -2.1
MCF2-208ENST00000519895 IGHV3OR16-8A0A075B7F1 116 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 A0A096LPF7 62 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 C16orf90A8MZG2 172 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 IBA57-AS1B1ANH7 110 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 F8W036 122 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 GATCO43716 136 aaKnown RBP1.94□□□□□ -2.1
MCF2-208ENST00000519895 MT-ND6P03923 174 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 SMIM15Q7Z3B0 74 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 BORCS7Q96B45 105 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 HHLA3Q9XRX5 114 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 V9GYV3 84 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 TRAV8-4A0A0B4J246 113 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 TRAV8-6A0A0B4J262 113 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 GAGE7O76087 117 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 GAGE12FP0CL80 117 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 GAGE12GP0CL81 117 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 GAGE12IP0CL82 117 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 NKX2-5P52952 324 aaPredicted RBP1.94□□□□□ -2.1
MCF2-208ENST00000519895 GNG5P63218 68 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 GAGE1Q13065 139 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 GAGE4Q13068 117 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 OR5I1Q13606 314 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 C14orf177Q52M58 125 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 Q6ZTC4 211 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 C8orf49Q96NF6 230 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 NOP10Q9NPE3 64 aaKnown RBP1.94□□□□□ -2.1
MCF2-208ENST00000519895 hDV102S1A0JD36 115 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 MT-ND4LP03901 98 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 ARMS2P0C7Q2 107 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 NANOS2P60321 138 aaKnown RBP1.94□□□□□ -2.1
MCF2-208ENST00000519895 RPL23P62829 140 aaKnown RBP1.94□□□□□ -2.1
MCF2-208ENST00000519895 MRPS36P82909 103 aaKnown RBP1.94□□□□□ -2.1
MCF2-208ENST00000519895 RPL36AP83881 106 aaKnown RBP1.94□□□□□ -2.1
MCF2-208ENST00000519895 AMN1Q8IY45 258 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 BOD1L2Q8IYS8 172 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 RPL36ALQ969Q0 106 aaKnown RBP1.94□□□□□ -2.1
MCF2-208ENST00000519895 RETNQ9HD89 108 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 NIT2Q9NQR4 276 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 PHLDA3Q9Y5J5 127 aa1.94□□□□□ -2.1
MCF2-208ENST00000519895 TRBV20OR9-2A0A075B6H5 130 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 TRBV7-3A0A075B6L6 115 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 TRBV27A0A0K0K1C4 114 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 NBDYA0A0U1RRE5 68 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 A0A1B0GUT8 65 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 HOXA5P20719 270 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 IFITM2Q01629 132 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 LYPD5Q6UWN5 251 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 SMIM7Q9BQ49 75 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 PRR34Q9NV39 138 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 PYGO1Q9Y3Y4 419 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 TNXBP22105 4242 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 TRAV12-2A0A075B6T6 113 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 IGHV3OR16-12A0A075B7B8 117 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 TRAV8-3A0A0A6YYJ7 113 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 TMEM218A2RU14 115 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 ZNF727A8MUV8 499 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 K7EN84 100 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 M0QY20 66 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 S100A4P26447 101 aaKnown RBP1.93□□□□□ -2.1
MCF2-208ENST00000519895 ZNF876PQ49A33 203 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 Q6ZTI0 123 aa1.93□□□□□ -2.1
MCF2-208ENST00000519895 LINC00518Q8N0U6 118 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms