RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 TMEM262E9PQX1 116 aa8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 SLC25A20O43772 301 aa8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 CIDEAO60543 219 aa8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 DEFB136Q30KP8 78 aa8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 LINC00467Q9BRT7 94 aa8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 NDUFA12Q9UI09 145 aa8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 MAP1AP78559 2803 aaPredicted RBP8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 ANKRD17O75179 2603 aaKnown RBP8.28□□□□□ -1.08
NUDCD1-203ENST00000519607 TMEM61Q8N0U2 210 aa8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 C4orf3Q8WVX3 66 aa8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 VPS13CQ709C8 3753 aa8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 COL12A1Q99715 3063 aa8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 C9JAW5 83 aa8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 INSP01308 110 aa8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 IGHV4-31P0DP07 118 aa8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 KHDC1LQ5JSQ8 128 aa8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 CEMP1Q6PRD7 247 aaPredicted RBP8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 UBE2D4Q9Y2X8 147 aa8.27□□□□□ -1.09
NUDCD1-203ENST00000519607 TRAV8-3A0A0A6YYJ7 113 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 IGHV3-53P01767 116 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 Q8N2B8 174 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 ANKRD29Q8N6D5 301 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 VSIG2Q96IQ7 327 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 CHCHD7Q9BUK0 85 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 MAP6D1Q9H9H5 199 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 YAE1D1Q9NRH1 226 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 SPANXCQ9NY87 97 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 RBMY1BA6NDE4 496 aaKnown RBP8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 RBMY1EA6NEQ0 496 aaKnown RBP8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 COX6CP09669 75 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 SPINK8P0C7L1 97 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 RBMY1DP0C7P1 496 aaKnown RBP8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 DGAT2L7PQ6IED9 249 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
NUDCD1-203ENST00000519607 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
NUDCD1-203ENST00000519607 BEAN1Q3B7T3 259 aa8.25□□□□□ -1.09
NUDCD1-203ENST00000519607 RNASE13Q5GAN3 156 aaKnown RBP8.25□□□□□ -1.09
NUDCD1-203ENST00000519607 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
NUDCD1-203ENST00000519607 FAM104AQ969W3 186 aa8.25□□□□□ -1.09
NUDCD1-203ENST00000519607 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.24□□□□□ -1.09
NUDCD1-203ENST00000519607 IGKV2-29A2NJV5 120 aaPredicted RBP8.24□□□□□ -1.09
NUDCD1-203ENST00000519607 MIAQ16674 131 aa8.24□□□□□ -1.09
NUDCD1-203ENST00000519607 Q6ZSN1 163 aa8.24□□□□□ -1.09
NUDCD1-203ENST00000519607 C11orf72Q8NBR9 251 aa8.24□□□□□ -1.09
NUDCD1-203ENST00000519607 RNF183Q96D59 192 aa8.24□□□□□ -1.09
NUDCD1-203ENST00000519607 LITAFQ99732 161 aa8.24□□□□□ -1.09
NUDCD1-203ENST00000519607 USP9XQ93008 2570 aaPredicted RBP8.24□□□□□ -1.09
NUDCD1-203ENST00000519607 CR1P17927 2039 aa8.24□□□□□ -1.09
NUDCD1-203ENST00000519607 USP9YO00507 2555 aaPredicted RBP8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 RS1O15537 224 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 EIF4EBP3O60516 100 aaPredicted RBP8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 PRM2P04554 102 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 CIRBPQ14011 172 aaKnown RBP8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 DEFB114Q30KQ6 69 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 Q6ZUT4 128 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 TIMM17BO60830 172 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 IFITM1P13164 125 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 TIRAPP58753 221 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 CKS1BP61024 79 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 LINC01620Q4KN68 170 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 ZFAND6Q6FIF0 208 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 CLUHP3Q96NS8 147 aa8.23□□□□□ -1.09
NUDCD1-203ENST00000519607 CELSR2Q9HCU4 2923 aa8.22□□□□□ -1.09
NUDCD1-203ENST00000519607 IGHV3-38A0A0C4DH36 116 aa8.22□□□□□ -1.09
NUDCD1-203ENST00000519607 CRYBG3Q68DQ2 2970 aa8.22□□□□□ -1.09
NUDCD1-203ENST00000519607 STHQ8IWL8 128 aa8.22□□□□□ -1.09
NUDCD1-203ENST00000519607 Q9UF83 564 aa8.22□□□□□ -1.09
NUDCD1-203ENST00000519607 FLNCQ14315 2725 aa8.21□□□□□ -1.09
NUDCD1-203ENST00000519607 TRAV25A0A0B4J276 109 aa8.21□□□□□ -1.1
NUDCD1-203ENST00000519607 TRIAP1O43715 76 aa8.21□□□□□ -1.1
NUDCD1-203ENST00000519607 ADAMTSL4-AS1Q5T5F5 129 aa8.21□□□□□ -1.1
NUDCD1-203ENST00000519607 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
NUDCD1-203ENST00000519607 KMT2BQ9UMN6 2715 aaPredicted RBP8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 TRBV10-2A0A0K0K1G8 114 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 XGP55808 180 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 HERVK_113P63121 156 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 LRRC75A-AS1Q8N1F1 130 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 BBC3Q96PG8 261 aaPredicted RBP8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 MT-ATP8P03928 68 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 FHL3Q13643 280 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 DEFB113Q30KQ7 82 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 LINC01600Q96MT4 127 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 XCL2Q9UBD3 114 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 CDKN2A-AS1Q9UH64 79 aa8.2□□□□□ -1.1
NUDCD1-203ENST00000519607 IGLV5-45A0A087WSX0 123 aa8.19□□□□□ -1.1
NUDCD1-203ENST00000519607 NDUFA1O15239 70 aa8.19□□□□□ -1.1
NUDCD1-203ENST00000519607 RPL36AP83881 106 aaKnown RBP8.19□□□□□ -1.1
NUDCD1-203ENST00000519607 TEX29Q8N6K0 151 aa8.19□□□□□ -1.1
NUDCD1-203ENST00000519607 RPL36ALQ969Q0 106 aaKnown RBP8.19□□□□□ -1.1
NUDCD1-203ENST00000519607 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
NUDCD1-203ENST00000519607 MYO18BQ8IUG5 2567 aa8.19□□□□□ -1.1
NUDCD1-203ENST00000519607 IGHV3OR16-12A0A075B7B8 117 aa8.19□□□□□ -1.1
NUDCD1-203ENST00000519607 A8MZ25 164 aa8.19□□□□□ -1.1
NUDCD1-203ENST00000519607 PRB1P04280 392 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms