RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 COL7A1Q02388 2944 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 GAGE12JA6NER3 117 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-209ENST00000519141 GAGE1Q13065 139 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 GAGE4Q13068 117 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 GAGE5Q13069 117 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 COTL1Q14019 142 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 GAGE13Q4V321 117 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 DEFB121Q5J5C9 76 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 SPATA12Q7Z6I5 190 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 HHLA3Q9XRX5 114 aa8.75□□□□□ -1.01
SPIDR-209ENST00000519141 IGHV3-38A0A0C4DH36 116 aa8.74□□□□□ -1.01
SPIDR-209ENST00000519141 ATP5G1P05496 136 aa8.74□□□□□ -1.01
SPIDR-209ENST00000519141 UBE2D3P61077 147 aa8.74□□□□□ -1.01
SPIDR-209ENST00000519141 UBE2D2P62837 147 aa8.74□□□□□ -1.01
SPIDR-209ENST00000519141 LINC01545Q5VT33 79 aa8.74□□□□□ -1.01
SPIDR-209ENST00000519141 TEX43Q6ZNM6 134 aa8.74□□□□□ -1.01
SPIDR-209ENST00000519141 DAZ4Q86SG3 579 aaKnown RBP8.74□□□□□ -1.01
SPIDR-209ENST00000519141 SBSPONQ8IVN8 264 aa8.74□□□□□ -1.01
SPIDR-209ENST00000519141 C11orf68Q9H3H3 251 aaKnown RBP8.74□□□□□ -1.01
SPIDR-209ENST00000519141 DAZ3Q9NR90 486 aaKnown RBP8.74□□□□□ -1.01
SPIDR-209ENST00000519141 RPL39P62891 51 aaKnown RBP8.73□□□□□ -1.01
SPIDR-209ENST00000519141 Q6ZN92 141 aa8.73□□□□□ -1.01
SPIDR-209ENST00000519141 ERASQ7Z444 233 aa8.73□□□□□ -1.01
SPIDR-209ENST00000519141 C20orf203Q8NBC4 194 aa8.73□□□□□ -1.01
SPIDR-209ENST00000519141 SPATA25Q9BR10 227 aa8.73□□□□□ -1.01
SPIDR-209ENST00000519141 PRO0255Q9UI72 69 aa8.73□□□□□ -1.01
SPIDR-209ENST00000519141 LOC100131303A0A0U1RQF7 123 aa8.72□□□□□ -1.01
SPIDR-209ENST00000519141 PRSS1P07477 247 aa8.72□□□□□ -1.01
SPIDR-209ENST00000519141 CRYBA4P53673 196 aa8.72□□□□□ -1.01
SPIDR-209ENST00000519141 LGALS9CQ6DKI2 356 aa8.72□□□□□ -1.01
SPIDR-209ENST00000519141 ATOH7Q8N100 152 aa8.72□□□□□ -1.01
SPIDR-209ENST00000519141 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
SPIDR-209ENST00000519141 MRAPQ8TCY5 172 aa8.71□□□□□ -1.02
SPIDR-209ENST00000519141 TMEM141Q96I45 108 aa8.71□□□□□ -1.02
SPIDR-209ENST00000519141 TIMM17AQ99595 171 aa8.71□□□□□ -1.02
SPIDR-209ENST00000519141 PMCHL2Q9BQD1 86 aa8.71□□□□□ -1.02
SPIDR-209ENST00000519141 TM2D3Q9BRN9 247 aa8.71□□□□□ -1.02
SPIDR-209ENST00000519141 IGIPA6NJ69 53 aa8.7□□□□□ -1.02
SPIDR-209ENST00000519141 PAX4O43316 350 aa8.7□□□□□ -1.02
SPIDR-209ENST00000519141 LINC00694P0DN24 101 aa8.7□□□□□ -1.02
SPIDR-209ENST00000519141 GYPEP15421 78 aa8.7□□□□□ -1.02
SPIDR-209ENST00000519141 HTN3P15516 51 aa8.7□□□□□ -1.02
SPIDR-209ENST00000519141 CHCHD7Q9BUK0 85 aa8.7□□□□□ -1.02
SPIDR-209ENST00000519141 ZMAT4Q9H898 229 aa8.7□□□□□ -1.02
SPIDR-209ENST00000519141 A0A0J9YWU9 116 aa8.69□□□□□ -1.02
SPIDR-209ENST00000519141 F5H768 121 aa8.69□□□□□ -1.02
SPIDR-209ENST00000519141 ODF1Q14990 250 aa8.69□□□□□ -1.02
SPIDR-209ENST00000519141 TRAV12-1A0A0B4J245 112 aa8.69□□□□□ -1.02
SPIDR-209ENST00000519141 C12orf74Q32Q52 190 aa8.69□□□□□ -1.02
SPIDR-209ENST00000519141 BAALCQ8WXS3 180 aa8.69□□□□□ -1.02
SPIDR-209ENST00000519141 GTSF1LQ9H1H1 148 aa8.69□□□□□ -1.02
SPIDR-209ENST00000519141 PAM16Q9Y3D7 125 aa8.69□□□□□ -1.02
SPIDR-209ENST00000519141 TENM3Q9P273 2699 aa8.68□□□□□ -1.02
SPIDR-209ENST00000519141 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-209ENST00000519141 TRAV9-2A0A087WT02 112 aa8.68□□□□□ -1.02
SPIDR-209ENST00000519141 A0A087WX48 190 aa8.68□□□□□ -1.02
SPIDR-209ENST00000519141 IGKV2-29A2NJV5 120 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-209ENST00000519141 SPANXA1Q9NS26 97 aa8.68□□□□□ -1.02
SPIDR-209ENST00000519141 TRAV26-1A0A087WT03 109 aa8.67□□□□□ -1.02
SPIDR-209ENST00000519141 A0A0J9YY99 117 aa8.67□□□□□ -1.02
SPIDR-209ENST00000519141 TMEM97Q5BJF2 176 aa8.67□□□□□ -1.02
SPIDR-209ENST00000519141 PAPPA-AS1Q5QFB9 102 aa8.67□□□□□ -1.02
SPIDR-209ENST00000519141 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
SPIDR-209ENST00000519141 ZNF664Q8N3J9 261 aa8.67□□□□□ -1.02
SPIDR-209ENST00000519141 ATP6V0E2Q8NHE4 81 aa8.67□□□□□ -1.02
SPIDR-209ENST00000519141 PYGO1Q9Y3Y4 419 aa8.67□□□□□ -1.02
SPIDR-209ENST00000519141 HUWE1Q7Z6Z7 4374 aaKnown RBP8.67□□□□□ -1.02
SPIDR-209ENST00000519141 TRBV25-1A0A075B6N4 114 aa8.66□□□□□ -1.02
SPIDR-209ENST00000519141 PCP4L1A6NKN8 68 aa8.66□□□□□ -1.02
SPIDR-209ENST00000519141 HSBP1L1C9JCN9 74 aa8.66□□□□□ -1.02
SPIDR-209ENST00000519141 TSTD3H0UI37 97 aa8.66□□□□□ -1.02
SPIDR-209ENST00000519141 PKIAP61925 76 aa8.66□□□□□ -1.02
SPIDR-209ENST00000519141 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
SPIDR-209ENST00000519141 VSIG2Q96IQ7 327 aa8.66□□□□□ -1.02
SPIDR-209ENST00000519141 TMEM243Q9BU79 118 aa8.66□□□□□ -1.02
SPIDR-209ENST00000519141 PRO1933Q9H354 126 aa8.66□□□□□ -1.02
SPIDR-209ENST00000519141 CHTOPQ9Y3Y2 248 aaKnown RBP8.66□□□□□ -1.02
SPIDR-209ENST00000519141 PRSS29PA6NIE9 313 aa8.65□□□□□ -1.02
SPIDR-209ENST00000519141 F8VRH5 84 aa8.65□□□□□ -1.02
SPIDR-209ENST00000519141 DPM2O94777 84 aa8.65□□□□□ -1.02
SPIDR-209ENST00000519141 NPSP0C0P6 89 aa8.65□□□□□ -1.02
SPIDR-209ENST00000519141 PMVKQ15126 192 aa8.65□□□□□ -1.02
SPIDR-209ENST00000519141 MAJINQ3KP22 176 aa8.65□□□□□ -1.02
SPIDR-209ENST00000519141 C11orf45Q8TAV5 145 aa8.65□□□□□ -1.02
SPIDR-209ENST00000519141 MRPL35Q9NZE8 188 aaKnown RBP8.65□□□□□ -1.02
SPIDR-209ENST00000519141 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
SPIDR-209ENST00000519141 IGLV4-3A0A075B6K6 122 aa8.65□□□□□ -1.03
SPIDR-209ENST00000519141 UBE2L6O14933 153 aa8.65□□□□□ -1.03
SPIDR-209ENST00000519141 IGKCP01834 107 aa8.65□□□□□ -1.03
SPIDR-209ENST00000519141 PLNP26678 52 aa8.65□□□□□ -1.03
SPIDR-209ENST00000519141 SMAGPQ0VAQ4 97 aa8.65□□□□□ -1.03
SPIDR-209ENST00000519141 Q6ZTC4 211 aa8.65□□□□□ -1.03
SPIDR-209ENST00000519141 OPRPNQ99935 248 aaPredicted RBP8.65□□□□□ -1.03
SPIDR-209ENST00000519141 TIMM21Q9BVV7 248 aa8.65□□□□□ -1.03
SPIDR-209ENST00000519141 TRBV6-8A0A0A6YYG3 113 aa8.64□□□□□ -1.03
SPIDR-209ENST00000519141 hDV102S1A0JD36 115 aa8.64□□□□□ -1.03
SPIDR-209ENST00000519141 DGAT2L7PQ6IED9 249 aa8.64□□□□□ -1.03
SPIDR-209ENST00000519141 CEMP1Q6PRD7 247 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-209ENST00000519141 VCX2Q9H322 139 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms