RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 RBMY1CP0DJD4 496 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 IGLL1P15814 213 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 HNRNPA3P51991 378 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 LINC00315P59091 139 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 SNRPD3P62318 126 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 RBMY1FQ15415 496 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 SPANXN1Q5VSR9 72 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 C2orf66Q6UXQ4 117 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 FOXI2Q6ZQN5 318 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 MRPL52Q86TS9 123 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 TMEM61Q8N0U2 210 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 DEFB125Q8N687 156 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 POM121L12Q8N7R1 296 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 OR9G4Q8NGQ1 327 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 OR1N2Q8NGR9 330 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 MRAP2Q96G30 205 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 PMCHL2Q9BQD1 86 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 NOTCH2Q04721 2471 aa3.43□□□□□ -1.86
CTNNA1-212ENST00000518919 TRAV12-3A0A0B4J271 114 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 CD28P10747 220 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 HLA-DRB4P13762 266 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 S100A4P26447 101 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 DEFB131AP59861 70 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 CXCL6P80162 114 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 SPINK13Q1W4C9 94 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 C14orf177Q52M58 125 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 ZNF705AQ6ZN79 300 aaPredicted RBP3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 Q8N8P6 123 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 OR11H1Q8NG94 326 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 RPL39LQ96EH5 51 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 AP1S3Q96PC3 154 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 SMIM2Q9BVW6 85 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 MAP1LC3CQ9BXW4 147 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 DPH3P1Q9H4G8 78 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 C16orf95Q9H693 158 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 ST20Q9HBF5 79 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 NXT2Q9NPJ8 142 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 UQCR10Q9UDW1 63 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 KIF25-AS1Q9Y6Z4 181 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 HLA-DRB4X5D2U9 266 aa3.42□□□□□ -1.86
CTNNA1-212ENST00000518919 OTOGQ6ZRI0 2925 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 NF1P21359 2839 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 CUBNO60494 3623 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 SETD2Q9BYW2 2564 aaPredicted RBP3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 IGHV1OR15-1A0A075B7D0 117 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 A0A1B0GV90 55 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 H3BMM0 161 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 M0R143 59 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 MGPP08493 103 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 CD7P09564 240 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 FCER1GP30273 86 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 CDKN1BP46527 198 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 DEFB114Q30KQ6 69 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 LGALS9BQ3B8N2 356 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 LGALS9CQ6DKI2 356 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 Q6ZN92 141 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 SMIM15Q7Z3B0 74 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 C14orf178Q8N769 122 aaPredicted RBP3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 LINC01006Q8NI28 216 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 DYNLRB2Q8TF09 96 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 TMEM158Q8WZ71 300 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 IFI27L1Q96BM0 104 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 PHLDA3Q9Y5J5 127 aa3.41□□□□□ -1.86
CTNNA1-212ENST00000518919 WNK1Q9H4A3 2382 aa3.4□□□□□ -1.86
CTNNA1-212ENST00000518919 TCAPO15273 167 aa3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 FGF6P10767 208 aa3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 TSPOP30536 169 aa3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 MORN3Q6PF18 240 aaPredicted RBP3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 NEGR1Q7Z3B1 354 aa3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 C18orf15Q96N68 181 aa3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 SMR3AQ99954 134 aa3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 GOLT1BQ9Y3E0 138 aa3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 AGRNO00468 2067 aa3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 HIVEP2P31629 2446 aa3.4□□□□□ -1.87
CTNNA1-212ENST00000518919 MUC4Q99102 2169 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 SORL1Q92673 2214 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 CRYGDP07320 174 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 SMIM17P0DL12 118 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 KRTAP10-3P60369 221 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 NUTF2P61970 127 aaKnown RBP3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 Q6ZTC4 211 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 C2orf91Q6ZV80 131 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 OR4C5Q8NGB2 326 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 C20orf78Q9BR46 151 aa3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 MRPS16Q9Y3D3 137 aaKnown RBP3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 TSSC4Q9Y5U2 329 aaPredicted RBP3.39□□□□□ -1.87
CTNNA1-212ENST00000518919 NSD1Q96L73 2696 aaPredicted RBP3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 JMJD1CQ15652 2540 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 FN1P02751 2386 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 TRAV25A0A0B4J276 109 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 TRBV6-5A0A0K0K1A5 114 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 HSBP1L1C9JCN9 74 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 LY6G6DO95868 133 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 PRM2P04554 102 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 COX8AP10176 69 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 POLR2KP53803 58 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 BATFQ16520 125 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms