RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 PMCHP20382 165 aa12.47□□□□□ -0.41
TFF3-204ENST00000518498 Q0VG73 95 aa12.47□□□□□ -0.41
TFF3-204ENST00000518498 C18orf32Q8TCD1 76 aa12.47□□□□□ -0.41
TFF3-204ENST00000518498 NXT2Q9NPJ8 142 aaKnown RBP12.47□□□□□ -0.41
TFF3-204ENST00000518498 A0A0J9YY99 117 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 SDHAF1A6NFY7 115 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 VCYO14598 125 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 TCAPO15273 167 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST1H2BKO60814 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST1H2BJP06899 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 GYPEP15421 78 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST1H2BOP23527 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST1H2BBP33778 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST1H2BDP58876 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST1H2BCP62807 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 MRPL23Q16540 153 aaKnown RBP12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 ESRGQ1W209 222 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 SMIM2Q9BVW6 85 aa12.46□□□□□ -0.41
TFF3-204ENST00000518498 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 POLR2KP53803 58 aaKnown RBP12.45□□□□□ -0.42
TFF3-204ENST00000518498 GAGE1Q13065 139 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 GAGE4Q13068 117 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 GAGE5Q13069 117 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 GAGE13Q4V321 117 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 DAZ4Q86SG3 579 aaKnown RBP12.45□□□□□ -0.42
TFF3-204ENST00000518498 PRSS3P2Q8NHM4 247 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 VSIG2Q96IQ7 327 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 UPK3BQ9BT76 320 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 TMEM70Q9BUB7 260 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 KRTAP1-5Q9BYS1 174 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 DAZ3Q9NR90 486 aaKnown RBP12.45□□□□□ -0.42
TFF3-204ENST00000518498 ICOSQ9Y6W8 199 aa12.45□□□□□ -0.42
TFF3-204ENST00000518498 TRBV27A0A0K0K1C4 114 aa12.44□□□□□ -0.42
TFF3-204ENST00000518498 K7EMI3 77 aa12.44□□□□□ -0.42
TFF3-204ENST00000518498 BTF3P20290 206 aaKnown RBP12.44□□□□□ -0.42
TFF3-204ENST00000518498 UBE2D3P61077 147 aa12.44□□□□□ -0.42
TFF3-204ENST00000518498 UBE2D2P62837 147 aa12.44□□□□□ -0.42
TFF3-204ENST00000518498 BAGE3Q86Y29 109 aa12.44□□□□□ -0.42
TFF3-204ENST00000518498 Q8N8P6 123 aa12.44□□□□□ -0.42
TFF3-204ENST00000518498 KIR2DL4Q99706 377 aa12.44□□□□□ -0.42
TFF3-204ENST00000518498 LOC389332A0A1B0GUA5 103 aa12.43□□□□□ -0.42
TFF3-204ENST00000518498 I3L3M4 83 aa12.43□□□□□ -0.42
TFF3-204ENST00000518498 KRTAP10-2P60368 255 aa12.43□□□□□ -0.42
TFF3-204ENST00000518498 TMEM97Q5BJF2 176 aa12.43□□□□□ -0.42
TFF3-204ENST00000518498 FA2HQ7L5A8 372 aa12.43□□□□□ -0.42
TFF3-204ENST00000518498 LOC100131303A0A0U1RQF7 123 aa12.42□□□□□ -0.42
TFF3-204ENST00000518498 LINC00694P0DN24 101 aa12.42□□□□□ -0.42
TFF3-204ENST00000518498 IQCJQ1A5X6 159 aa12.42□□□□□ -0.42
TFF3-204ENST00000518498 MRPS16Q9Y3D3 137 aaKnown RBP12.42□□□□□ -0.42
TFF3-204ENST00000518498 IFI27P40305 119 aaPredicted RBP12.41□□□□□ -0.42
TFF3-204ENST00000518498 ATP6V0E2Q8NHE4 81 aa12.41□□□□□ -0.42
TFF3-204ENST00000518498 CHCHD1Q96BP2 118 aaKnown RBP12.41□□□□□ -0.42
TFF3-204ENST00000518498 Q9UF83 564 aa12.41□□□□□ -0.42
TFF3-204ENST00000518498 S100A6P06703 90 aa12.4□□□□□ -0.42
TFF3-204ENST00000518498 LINC00614P0C842 121 aa12.4□□□□□ -0.42
TFF3-204ENST00000518498 COTL1Q14019 142 aa12.4□□□□□ -0.42
TFF3-204ENST00000518498 NEGR1Q7Z3B1 354 aa12.4□□□□□ -0.42
TFF3-204ENST00000518498 LRP1BQ9NZR2 4599 aa12.4□□□□□ -0.42
TFF3-204ENST00000518498 G0S2P27469 103 aa12.39□□□□□ -0.43
TFF3-204ENST00000518498 FCER1GP30273 86 aa12.39□□□□□ -0.43
TFF3-204ENST00000518498 ORMDL2Q53FV1 153 aa12.39□□□□□ -0.43
TFF3-204ENST00000518498 COA6Q5JTJ3 125 aaKnown RBP12.39□□□□□ -0.43
TFF3-204ENST00000518498 NIT1Q86X76 327 aa12.39□□□□□ -0.43
TFF3-204ENST00000518498 AP5S1Q9NUS5 200 aa12.39□□□□□ -0.43
TFF3-204ENST00000518498 A0A096LPF7 62 aa12.38□□□□□ -0.43
TFF3-204ENST00000518498 LINC01546A6NGU7 62 aa12.38□□□□□ -0.43
TFF3-204ENST00000518498 NDUFA6P56556 154 aa12.38□□□□□ -0.43
TFF3-204ENST00000518498 RNASEKQ6P5S7 137 aaKnown RBP12.38□□□□□ -0.43
TFF3-204ENST00000518498 GTSF1LQ9H1H1 148 aa12.38□□□□□ -0.43
TFF3-204ENST00000518498 LAGE3Q14657 143 aa12.37□□□□□ -0.43
TFF3-204ENST00000518498 PGPEP1Q9NXJ5 209 aa12.37□□□□□ -0.43
TFF3-204ENST00000518498 IGHV3-38A0A0C4DH36 116 aa12.36□□□□□ -0.43
TFF3-204ENST00000518498 TIRAPP58753 221 aa12.36□□□□□ -0.43
TFF3-204ENST00000518498 LINC01549A6NIU2 74 aa12.35□□□□□ -0.43
TFF3-204ENST00000518498 EPM2AB3EWF7 344 aa12.35□□□□□ -0.43
TFF3-204ENST00000518498 HSBP1O75506 76 aa12.35□□□□□ -0.43
TFF3-204ENST00000518498 SERF1AO75920 110 aa12.35□□□□□ -0.43
TFF3-204ENST00000518498 TSHBP01222 138 aa12.35□□□□□ -0.43
TFF3-204ENST00000518498 TRBV25-1A0A075B6N4 114 aa12.34□□□□□ -0.43
TFF3-204ENST00000518498 SIVA1O15304 175 aa12.34□□□□□ -0.43
TFF3-204ENST00000518498 ESDP10768 282 aa12.34□□□□□ -0.43
TFF3-204ENST00000518498 TMEM18Q96B42 140 aa12.34□□□□□ -0.43
TFF3-204ENST00000518498 URB1-AS1Q96HZ7 61 aa12.34□□□□□ -0.43
TFF3-204ENST00000518498 IGHV1-24A0A0C4DH33 117 aa12.33□□□□□ -0.44
TFF3-204ENST00000518498 EREGO14944 169 aa12.33□□□□□ -0.44
TFF3-204ENST00000518498 AMTP48728 403 aa12.33□□□□□ -0.44
TFF3-204ENST00000518498 Q6ZRN7 208 aaPredicted RBP12.33□□□□□ -0.44
TFF3-204ENST00000518498 TMA7Q9Y2S6 64 aaKnown RBP12.33□□□□□ -0.44
TFF3-204ENST00000518498 TRBV6-8A0A0A6YYG3 113 aa12.32□□□□□ -0.44
TFF3-204ENST00000518498 SMAGPQ0VAQ4 97 aa12.32□□□□□ -0.44
TFF3-204ENST00000518498 APOBP04114 4563 aaKnown RBP12.32□□□□□ -0.44
TFF3-204ENST00000518498 DNAH5Q8TE73 4624 aa12.31□□□□□ -0.44
TFF3-204ENST00000518498 LELP1Q5T871 98 aa12.31□□□□□ -0.44
TFF3-204ENST00000518498 TMEM243Q9BU79 118 aa12.31□□□□□ -0.44
TFF3-204ENST00000518498 H7C423 109 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms