RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 MYOM2P54296 1465 aa0.48□□□□□ -2.33
RNU6-840P-201ENST00000517275 CADP27708 2225 aa0.48□□□□□ -2.33
RNU6-840P-201ENST00000517275 PPP1R17O96001 155 aa0.48□□□□□ -2.33
RNU6-840P-201ENST00000517275 WHAMMP3Q1A5X7 153 aa0.48□□□□□ -2.33
RNU6-840P-201ENST00000517275 TTC9CQ8N5M4 171 aa0.48□□□□□ -2.33
RNU6-840P-201ENST00000517275 GNG8Q9UK08 70 aa0.48□□□□□ -2.33
RNU6-840P-201ENST00000517275 LAMC3Q9Y6N6 1575 aa0.48□□□□□ -2.33
RNU6-840P-201ENST00000517275 FAM135AQ9P2D6 1515 aa0.48□□□□□ -2.33
RNU6-840P-201ENST00000517275 SPEF2Q9C093 1822 aa0.48□□□□□ -2.33
RNU6-840P-201ENST00000517275 TRBV7-3A0A075B6L6 115 aa0.47□□□□□ -2.33
RNU6-840P-201ENST00000517275 TRAV1-2A0A0B4J238 106 aa0.47□□□□□ -2.33
RNU6-840P-201ENST00000517275 SMIM6P0DI80 62 aa0.47□□□□□ -2.33
RNU6-840P-201ENST00000517275 PPP3R1P63098 170 aa0.47□□□□□ -2.33
RNU6-840P-201ENST00000517275 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
RNU6-840P-201ENST00000517275 AMELXQ99217 191 aa0.47□□□□□ -2.33
RNU6-840P-201ENST00000517275 CGREF1Q99674 301 aa0.47□□□□□ -2.33
RNU6-840P-201ENST00000517275 UBE2L5PA0A1B0GUS4 154 aa0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 NMBP08949 121 aa0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 GCHFRP30047 84 aa0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 UBE2L3P68036 154 aaKnown RBP0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 C9orf153Q5TBE3 101 aa0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 MGST2Q99735 147 aa0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 MUC5BQ9HC84 5762 aaPredicted RBP0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 NWD2Q9ULI1 1742 aa0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 GOLGA3Q08378 1498 aa0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 TENM3Q9P273 2699 aa0.46□□□□□ -2.34
RNU6-840P-201ENST00000517275 PATJQ8NI35 1801 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 ARFGEF1Q9Y6D6 1849 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 EIF4G3O43432 1585 aaKnown RBP0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 MAPKBP1O60336 1514 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 CACNA1HO95180 2353 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 H3BQ15 152 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 M0R135 149 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 SNAPC5O75971 98 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 S100PP25815 95 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 ATP5EP56381 51 aaPredicted RBP0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 SPAG11BQ08648 103 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 SPAG11AQ6PDA7 123 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 NDUFA4L2Q9NRX3 87 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 LINC00474Q9P2X8 69 aa0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 RIMS1Q86UR5 1692 aaKnown RBP0.45□□□□□ -2.34
RNU6-840P-201ENST00000517275 ARAP2Q8WZ64 1704 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 TNCP24821 2201 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 MRC1P22897 1456 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 FAM24AA6NFZ4 105 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 DCDP81605 110 aaKnown RBP0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 SPINK6Q6UWN8 80 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 SMIM4Q8WVI0 70 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 DYNLRB1Q9NP97 96 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 CACNA1EQ15878 2313 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 C10orf71Q711Q0 1435 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 PI4KAP42356 2102 aa0.44□□□□□ -2.34
RNU6-840P-201ENST00000517275 ANK2Q01484 3957 aa0.43□□□□□ -2.34
RNU6-840P-201ENST00000517275 LOC285095A0A1B0GVY8 99 aa0.43□□□□□ -2.34
RNU6-840P-201ENST00000517275 IFITM1P13164 125 aa0.43□□□□□ -2.34
RNU6-840P-201ENST00000517275 MYOZ3Q8TDC0 251 aa0.43□□□□□ -2.34
RNU6-840P-201ENST00000517275 UNC13BO14795 1591 aa0.42□□□□□ -2.34
RNU6-840P-201ENST00000517275 PEG3Q9GZU2 1588 aa0.42□□□□□ -2.34
RNU6-840P-201ENST00000517275 CFAP126Q5VTH2 177 aa0.42□□□□□ -2.34
RNU6-840P-201ENST00000517275 LINC00472Q9H8W2 130 aa0.42□□□□□ -2.34
RNU6-840P-201ENST00000517275 LINC01558Q9Y6Z2 57 aa0.42□□□□□ -2.34
RNU6-840P-201ENST00000517275 PZPP20742 1482 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 DOCK1Q14185 1865 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 C20orf202A1L168 122 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 S100A1P23297 94 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 COX6A2Q02221 97 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 UBE2DNLQ8IWF7 75 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 SVBPQ8N300 66 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 TSLPQ969D9 159 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 FAM167A-AS1Q96KT0 104 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 CDC42SE2Q9NRR3 84 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 V9GYH0 126 aa0.41□□□□□ -2.34
RNU6-840P-201ENST00000517275 HMGN4O00479 90 aa0.4□□□□□ -2.35
RNU6-840P-201ENST00000517275 UQCR11O14957 56 aa0.4□□□□□ -2.35
RNU6-840P-201ENST00000517275 SPINK8P0C7L1 97 aa0.4□□□□□ -2.35
RNU6-840P-201ENST00000517275 HSD52Q0P140 79 aa0.4□□□□□ -2.35
RNU6-840P-201ENST00000517275 TTC28Q96AY4 2481 aa0.4□□□□□ -2.35
RNU6-840P-201ENST00000517275 ABCA12Q86UK0 2595 aa0.4□□□□□ -2.35
RNU6-840P-201ENST00000517275 ZNF609O15014 1411 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 PRDM2Q13029 1718 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 IFT172Q9UG01 1749 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 MYH8P13535 1937 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 IGLC7A0M8Q6 106 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 TMEM262E9PQX1 116 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 F8VRH5 84 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 BAGE2Q86Y30 109 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 C14orf144Q96I85 54 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 ROBO1Q9Y6N7 1651 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 CELSR2Q9HCU4 2923 aa0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 TPRP12270 2363 aaKnown RBP0.39□□□□□ -2.35
RNU6-840P-201ENST00000517275 USP24Q9UPU5 2620 aa0.38□□□□□ -2.35
RNU6-840P-201ENST00000517275 CUL7Q14999 1698 aa0.38□□□□□ -2.35
RNU6-840P-201ENST00000517275 CTXND1A0A1B0GTU2 59 aa0.38□□□□□ -2.35
RNU6-840P-201ENST00000517275 ZNF815PA8K554 130 aa0.38□□□□□ -2.35
RNU6-840P-201ENST00000517275 COX17Q14061 63 aa0.38□□□□□ -2.35
RNU6-840P-201ENST00000517275 SSBP3-AS1Q7Z2R9 100 aa0.38□□□□□ -2.35
RNU6-840P-201ENST00000517275 CNFNQ9BYD5 112 aa0.38□□□□□ -2.35
RNU6-840P-201ENST00000517275 SHROOM2Q13796 1616 aa0.38□□□□□ -2.35
RNU6-840P-201ENST00000517275 SCAPERQ9BY12 1400 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms