RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 PLXNB2O15031 1838 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 TRIOBPQ9H2D6 2365 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 RP1L1Q8IWN7 2480 aaPredicted RBP1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 TRBV7-1A0A0A6YYK4 115 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 FXYD1O00168 92 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 GNG11P61952 73 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 ZNF56Q15929 161 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 C10orf128Q5T292 105 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 COX7B2Q8TF08 81 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 TSLPQ969D9 159 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 MYOM1P52179 1685 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 COL4A6Q14031 1691 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 KDM3BQ7LBC6 1761 aa1.03□□□□□ -2.24
SCARNA3-201ENST00000517097 ANKRD36A6QL64 1941 aa1.03□□□□□ -2.25
SCARNA3-201ENST00000517097 hADV29S1A0JD25 119 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 GNGT2O14610 69 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 LINC00032P0C843 101 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 ELOF1P60002 83 aaKnown RBP1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 GOLGA3Q08378 1498 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 ARHGEF5Q12774 1597 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 FAM74A4Q5TZK3 123 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 KIF21AQ7Z4S6 1674 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 Q86TA4 180 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 PPP1R1CQ8WVI7 109 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 CCL19Q99731 98 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 VAMP8Q9BV40 100 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 NSD3Q9BZ95 1437 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 Q9H521 79 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 BET1LQ9NYM9 111 aa1.02□□□□□ -2.25
SCARNA3-201ENST00000517097 KNTC1P50748 2209 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 NUP188Q5SRE5 1749 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 TRBV7-3A0A075B6L6 115 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 NAP1L6A6NFF2 107 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 J3QKU1 62 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 NCR3O14931 201 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 CAV3P56539 151 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 EDDM3BP56851 147 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 KLKP1Q107X0 134 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 DEFB119Q8N690 84 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 FAM213BQ8TBF2 198 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 PMCHL2Q9BQD1 86 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 V9GYS6 101 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 ZDBF2Q9HCK1 2354 aa1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 SUPT6HQ7KZ85 1726 aaKnown RBP1.01□□□□□ -2.25
SCARNA3-201ENST00000517097 PRDM15P57071 1507 aaPredicted RBP1□□□□□ -2.25
SCARNA3-201ENST00000517097 CADP27708 2225 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 PLEKHH2Q8IVE3 1493 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 A0A087WTM6 91 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 A0A1W2PPM0 123 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 EFNA4P52798 201 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 KRTAP12-3P60328 96 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 KRTDAPP60985 99 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 Q0VG73 95 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 LINC00575Q6W349 94 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 C9orf62Q8N4C0 152 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 MGST2Q99735 147 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 KIF20BQ96Q89 1820 aa1□□□□□ -2.25
SCARNA3-201ENST00000517097 ABCC3O15438 1527 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 ARHGEF12Q9NZN5 1544 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 MRC1P22897 1456 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 CNTRLQ7Z7A1 2325 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 ANKRD36BQ8N2N9 1353 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 COL6A6A6NMZ7 2263 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 TRBV30A0A0K0K1B3 111 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 CRYM-AS1A6NIL9 109 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 SEC11AP67812 179 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 NDUFA4L2Q9NRX3 87 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 TMEM14BQ9NUH8 114 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 SCP2D1Q9UJQ7 156 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 LENEPQ9Y5L5 61 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 V9GYV3 84 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 DIP2CQ9Y2E4 1556 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 MED14O60244 1454 aa0.99□□□□□ -2.25
SCARNA3-201ENST00000517097 ROS1P08922 2347 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 KRTAP5-8O75690 187 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 PPP1R17O96001 155 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 IGLC1P0CG04 106 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 LYNX1P0DP58 116 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 SPAG11BQ08648 103 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 Q5VV11 94 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 SPAG11AQ6PDA7 123 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 FAM167A-AS1Q96KT0 104 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 DYNLRB1Q9NP97 96 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 MANBALQ9NQG1 85 aa0.98□□□□□ -2.25
SCARNA3-201ENST00000517097 MYO3AQ8NEV4 1616 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 HIVEP2P31629 2446 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 TRAV22A0A0B4J277 110 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 CHKB-CPT1BH3BT56 60 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 ATOX1O00244 68 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 SFT2D2O95562 160 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 KRTAP12-4P60329 112 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 UBE2D3P61077 147 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 UBE2D2P62837 147 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 Q8N6K4 173 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 Q96NJ1 140 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 PRO1854Q9UHT4 67 aa0.97□□□□□ -2.25
SCARNA3-201ENST00000517097 HMGN4O00479 90 aa0.96□□□□□ -2.26
SCARNA3-201ENST00000517097 CCL18P55774 89 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms