RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 S100A4P26447 101 aaKnown RBP6.66□□□□□ -1.34
NEDD9-215ENST00000514660 SLC25A29Q8N8R3 303 aa6.66□□□□□ -1.34
NEDD9-215ENST00000514660 FER1L6-AS1Q8NA97 138 aa6.66□□□□□ -1.34
NEDD9-215ENST00000514660 OR10AG1Q8NH19 301 aa6.66□□□□□ -1.34
NEDD9-215ENST00000514660 IMMP2LQ96T52 175 aa6.66□□□□□ -1.34
NEDD9-215ENST00000514660 SPXQ9BT56 116 aa6.66□□□□□ -1.34
NEDD9-215ENST00000514660 Q9UF83 564 aa6.66□□□□□ -1.34
NEDD9-215ENST00000514660 F2Z2F3 143 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 SCO1O75880 301 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 CTRLP40313 264 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 SSTP61278 116 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 WDR73Q6P4I2 378 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 SH2D6Q7Z4S9 175 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 OR4C5Q8NGB2 326 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 ATP6V0E2Q8NHE4 81 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 PTH2Q96A98 100 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 NAT8BQ9UHF3 227 aa6.65□□□□□ -1.34
NEDD9-215ENST00000514660 IGKV2D-24A0A075B6R9 120 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 M0R2P5 195 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 NTF3P20783 257 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 SDIM1Q6ZPB5 146 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 YPEL4Q96NS1 127 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 TPPP3Q9BW30 176 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 CNFNQ9BYD5 112 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 JPT2Q9H910 190 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 PHLDA3Q9Y5J5 127 aa6.64□□□□□ -1.35
NEDD9-215ENST00000514660 A0A1B0GUT8 65 aa6.63□□□□□ -1.35
NEDD9-215ENST00000514660 PRSS1P07477 247 aa6.63□□□□□ -1.35
NEDD9-215ENST00000514660 CACNG7P62955 275 aa6.63□□□□□ -1.35
NEDD9-215ENST00000514660 CIRBPQ14011 172 aaKnown RBP6.63□□□□□ -1.35
NEDD9-215ENST00000514660 ELOBQ15370 118 aa6.63□□□□□ -1.35
NEDD9-215ENST00000514660 ZNF876PQ49A33 203 aa6.63□□□□□ -1.35
NEDD9-215ENST00000514660 CBLN2Q8IUK8 224 aa6.63□□□□□ -1.35
NEDD9-215ENST00000514660 SMCO4Q9NRQ5 59 aa6.63□□□□□ -1.35
NEDD9-215ENST00000514660 URGCP-MRPS24S4R325 110 aa6.63□□□□□ -1.35
NEDD9-215ENST00000514660 M0R381 172 aa6.62□□□□□ -1.35
NEDD9-215ENST00000514660 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
NEDD9-215ENST00000514660 SPANXN1Q5VSR9 72 aa6.62□□□□□ -1.35
NEDD9-215ENST00000514660 ZFP82Q8N141 532 aa6.62□□□□□ -1.35
NEDD9-215ENST00000514660 C9orf163Q8N9P6 203 aa6.62□□□□□ -1.35
NEDD9-215ENST00000514660 TRAV9-1A0A075B6T8 112 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 TGIF2-C20orf24A0A0A6YYL0 155 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 IGHV3-73A0A0B4J1V6 119 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 A0A1B0GXF2 115 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 H3BS24 57 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 PHOX2AO14813 284 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 RIGQ13278 110 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 TWIST1Q15672 202 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 PIK3CD-AS1Q5SR53 167 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 MRPL54Q6P161 138 aaKnown RBP6.61□□□□□ -1.35
NEDD9-215ENST00000514660 KCNIP4Q6PIL6 250 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 BTF3L4Q96K17 158 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 SAMD10Q9BYL1 202 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 KLK12Q9UKR0 248 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 COX11Q9Y6N1 276 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 KIF25-AS1Q9Y6Z4 181 aa6.61□□□□□ -1.35
NEDD9-215ENST00000514660 TRBV24-1A0A075B6N3 115 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 A0A087WYN8 130 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 COLCA2A8K830 154 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 S100PP25815 95 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 CFAP126Q5VTH2 177 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 UFSP1Q6NVU6 142 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 C14orf178Q8N769 122 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-215ENST00000514660 DPH3P1Q9H4G8 78 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 FSIP2Q5CZC0 6907 aa6.6□□□□□ -1.35
NEDD9-215ENST00000514660 TRBV6-4A0A1B0GX49 114 aa6.59□□□□□ -1.35
NEDD9-215ENST00000514660 USP17L23D6RBM5 183 aa6.59□□□□□ -1.35
NEDD9-215ENST00000514660 CAMPP49913 170 aa6.59□□□□□ -1.35
NEDD9-215ENST00000514660 ATP5L2Q7Z4Y8 100 aa6.59□□□□□ -1.35
NEDD9-215ENST00000514660 NIT1Q86X76 327 aa6.59□□□□□ -1.35
NEDD9-215ENST00000514660 GATD1Q8NB37 220 aa6.59□□□□□ -1.35
NEDD9-215ENST00000514660 UBE2WQ96B02 151 aa6.59□□□□□ -1.35
NEDD9-215ENST00000514660 BORCS7Q96B45 105 aa6.59□□□□□ -1.35
NEDD9-215ENST00000514660 A0A087WWL8 130 aa6.58□□□□□ -1.36
NEDD9-215ENST00000514660 A0A1B0GW15 77 aa6.58□□□□□ -1.36
NEDD9-215ENST00000514660 A8MWV9 139 aa6.58□□□□□ -1.36
NEDD9-215ENST00000514660 HBBP68871 147 aa6.58□□□□□ -1.36
NEDD9-215ENST00000514660 TMEM136Q6ZRR5 245 aa6.58□□□□□ -1.36
NEDD9-215ENST00000514660 RNF185Q96GF1 192 aa6.58□□□□□ -1.36
NEDD9-215ENST00000514660 TMEM191AQ9H0A3 160 aa6.58□□□□□ -1.36
NEDD9-215ENST00000514660 GAGE12JA6NER3 117 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 TRGC1P0CF51 173 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 RAB4AP20338 218 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 PRR3P79522 188 aaKnown RBP6.57□□□□□ -1.36
NEDD9-215ENST00000514660 GAGE1Q13065 139 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 GAGE4Q13068 117 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 GAGE5Q13069 117 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 RHOHQ15669 191 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 GAGE13Q4V321 117 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 FAM104BQ5XKR9 115 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 RASL11AQ6T310 242 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 ENHOQ6UWT2 76 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 RMI2Q96E14 147 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 PRADC1Q9BSG0 188 aa6.57□□□□□ -1.36
NEDD9-215ENST00000514660 KRTAP26-1Q6PEX3 210 aa6.56□□□□□ -1.36
NEDD9-215ENST00000514660 ZFP2Q6ZN57 461 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms