RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 BAGE3Q86Y29 109 aa0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 U3KQA8 63 aa0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 FLNCQ14315 2725 aa0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 IFT140Q96RY7 1462 aa0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 IFITM1P13164 125 aa0□□□□□ -2.41
HMGCS1-207ENST00000514610 RBM3P98179 157 aaKnown RBP0□□□□□ -2.41
HMGCS1-207ENST00000514610 CFAP126Q5VTH2 177 aa0□□□□□ -2.41
HMGCS1-207ENST00000514610 PSME4Q14997 1843 aa-0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 CFTRP13569 1480 aa-0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 MRC1P22897 1456 aa-0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 PXDNQ92626 1479 aa-0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 CCL18P55774 89 aa-0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 FAM107BQ9H098 131 aa-0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 PRO0255Q9UI72 69 aa-0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 PAIP2BQ9ULR5 123 aaKnown RBP-0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 PKDREJQ9NTG1 2253 aa-0.01□□□□□ -2.41
HMGCS1-207ENST00000514610 TRAV13-2A0A0B4J235 113 aa-0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 FAM25AB3EWG3 89 aa-0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 FAM25CB3EWG5 89 aa-0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 FAM25GB3EWG6 89 aa-0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 HCG22E2RYF7 251 aa-0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 GNG7O60262 68 aa-0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 PPP1R17O96001 155 aa-0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 ARL11Q969Q4 196 aa-0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 NPVFQ9HCQ7 196 aa-0.02□□□□□ -2.41
HMGCS1-207ENST00000514610 ZNF609O15014 1411 aa-0.03□□□□□ -2.41
HMGCS1-207ENST00000514610 SBF2Q86WG5 1849 aa-0.03□□□□□ -2.41
HMGCS1-207ENST00000514610 CCDC58Q4VC31 144 aa-0.03□□□□□ -2.41
HMGCS1-207ENST00000514610 Q5VV11 94 aa-0.03□□□□□ -2.41
HMGCS1-207ENST00000514610 LSM10Q969L4 123 aaKnown RBP-0.03□□□□□ -2.41
HMGCS1-207ENST00000514610 SPTBN1Q01082 2364 aaKnown RBP-0.03□□□□□ -2.41
HMGCS1-207ENST00000514610 CSMD3Q7Z407 3707 aa-0.04□□□□□ -2.42
HMGCS1-207ENST00000514610 SIX6O95475 246 aa-0.04□□□□□ -2.42
HMGCS1-207ENST00000514610 AQP10Q96PS8 301 aa-0.04□□□□□ -2.42
HMGCS1-207ENST00000514610 SCN3BQ9NY72 215 aa-0.04□□□□□ -2.42
HMGCS1-207ENST00000514610 CACNA1AO00555 2505 aa-0.04□□□□□ -2.42
HMGCS1-207ENST00000514610 PTPN13Q12923 2485 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 NHSL1Q5SYE7 1610 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 PIN1P1O15428 100 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 CFDP00746 253 aaPredicted RBP-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 C10orf128Q5T292 105 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 Q8N8P6 123 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 COPS9Q8WXC6 57 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 LINC00470Q9BZP3 86 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 AGPAT4-IT1Q9H0P7 198 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 CHD6Q8TD26 2715 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 KIF21AQ7Z4S6 1674 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 LRP6O75581 1613 aa-0.05□□□□□ -2.42
HMGCS1-207ENST00000514610 TENM4Q6N022 2769 aa-0.06□□□□□ -2.42
HMGCS1-207ENST00000514610 USF3Q68DE3 2245 aa-0.06□□□□□ -2.42
HMGCS1-207ENST00000514610 SPAARA0A1B0GVQ0 90 aa-0.06□□□□□ -2.42
HMGCS1-207ENST00000514610 NDUFA2O43678 99 aa-0.06□□□□□ -2.42
HMGCS1-207ENST00000514610 SPINK8P0C7L1 97 aa-0.06□□□□□ -2.42
HMGCS1-207ENST00000514610 TTC9CQ8N5M4 171 aa-0.06□□□□□ -2.42
HMGCS1-207ENST00000514610 CNFNQ9BYD5 112 aa-0.06□□□□□ -2.42
HMGCS1-207ENST00000514610 LRRC37A2A6NM11 1700 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 NEBP20929 6669 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 MBD5Q9P267 1494 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 PIGBOS1A0A0B4J2F0 54 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 A0A0D9SFI3 127 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 S100A12P80511 92 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 Q6AWC8 147 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 TSC22D3Q99576 134 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 CYP4F30PQ9H0H9 118 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 RERGLQ9H628 205 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 SERP1Q9Y6X1 66 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 R4GMQ9 66 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 LAMC1P11047 1609 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 MYO7BQ6PIF6 2116 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 MUC12Q9UKN1 5478 aa-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.07□□□□□ -2.42
HMGCS1-207ENST00000514610 CUL7Q14999 1698 aa-0.08□□□□□ -2.42
HMGCS1-207ENST00000514610 CTXND1A0A1B0GTU2 59 aa-0.08□□□□□ -2.42
HMGCS1-207ENST00000514610 M0R135 149 aa-0.08□□□□□ -2.42
HMGCS1-207ENST00000514610 MEIG1Q5JSS6 88 aa-0.08□□□□□ -2.42
HMGCS1-207ENST00000514610 C12orf73Q69YU5 71 aa-0.08□□□□□ -2.42
HMGCS1-207ENST00000514610 PPIP5K1Q6PFW1 1433 aa-0.08□□□□□ -2.42
HMGCS1-207ENST00000514610 PPRC1Q5VV67 1664 aaKnown RBP-0.08□□□□□ -2.42
HMGCS1-207ENST00000514610 ROBO1Q9Y6N7 1651 aa-0.08□□□□□ -2.42
HMGCS1-207ENST00000514610 SHROOM2Q13796 1616 aa-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 MIF4GDA9UHW6 222 aaKnown RBP-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 C10orf142B7Z368 130 aa-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 SNRNP25Q9BV90 132 aaKnown RBP-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 V9GYH0 126 aa-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 PKD1L1Q8TDX9 2849 aa-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 BTAF1O14981 1849 aa-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 MYCBP2O75592 4640 aa-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 HMCN2Q8NDA2 5059 aa-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 VWFP04275 2813 aa-0.09□□□□□ -2.42
HMGCS1-207ENST00000514610 QRICH2Q9H0J4 1663 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 GVINP1Q7Z2Y8 2422 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 TRAV22A0A0B4J277 110 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 M0R3E3 92 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 SELENOWP63302 87 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 HAMPP81172 84 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 SPAG11BQ08648 103 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 SPAG11AQ6PDA7 123 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 LENEPQ9Y5L5 61 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 LPAP08519 4548 aa-0.1□□□□□ -2.43
HMGCS1-207ENST00000514610 ERCC6L2Q5T890 1561 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms