RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 GEMIN2O14893 280 aaKnown RBP2.23□□□□□ -2.05
RFC1-216ENST00000514572 YPEL1O60688 119 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 IFNA1P01562 189 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 APOA2P02652 100 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 SCTP09683 121 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 SAA2P0DJI9 122 aaPredicted RBP2.23□□□□□ -2.05
RFC1-216ENST00000514572 SRIP30626 198 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 DEFA3P59666 94 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 B2MP61769 119 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 PPP3R1P63098 170 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 ZNF833PQ6ZTB9 187 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 MIR17HGQ75NE6 70 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 OR4K15Q8NH41 348 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 YPEL2Q96QA6 119 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 SCGB3A1Q96QR1 104 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 TXNDC17Q9BRA2 123 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 FAM103A1Q9BTL3 118 aaKnown RBP2.23□□□□□ -2.05
RFC1-216ENST00000514572 WFDC10AQ9H1F0 79 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 TAF9BQ9HBM6 251 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 TMEM138Q9NPI0 162 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 COA4Q9NYJ1 87 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 PRNDQ9UKY0 176 aa2.23□□□□□ -2.05
RFC1-216ENST00000514572 VPS13DQ5THJ4 4388 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 J3QQQ9 107 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 GGCTO75223 188 aaKnown RBP2.22□□□□□ -2.05
RFC1-216ENST00000514572 PGLYRP1O75594 196 aaPredicted RBP2.22□□□□□ -2.05
RFC1-216ENST00000514572 DHFRP00374 187 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 P0DMU3 169 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 FAM231AP0DMU4 169 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 FAM231CP0DMU5 169 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 CBLN1P23435 193 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 ZNF93P35789 620 aaPredicted RBP2.22□□□□□ -2.05
RFC1-216ENST00000514572 ATP5G3P48201 142 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 RHOGP84095 191 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 KTN1-AS1Q86SY8 53 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 BPIFA4PQ86YQ2 179 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 ACBD7Q8N6N7 88 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 OR51A4Q8NGJ6 313 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 OR10K1Q8NGX5 313 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 OR10AC1Q8NH08 325 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 OR5AK2Q8NH90 309 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 CKLFQ9UBR5 152 aa2.22□□□□□ -2.05
RFC1-216ENST00000514572 DNAH6Q9C0G6 4158 aa2.21□□□□□ -2.05
RFC1-216ENST00000514572 DNAH2Q9P225 4427 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 PKD1P98161 4303 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 TRAV10A0A0B4J240 114 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 J3QLW9 94 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 IFNA21P01568 189 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 IFNA17P01571 189 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 OR4E1P0C645 316 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 CRYBA4P53673 196 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 AQP4P55087 323 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 TMEM258P61165 79 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 SNRPGP62308 76 aaKnown RBP2.21□□□□□ -2.06
RFC1-216ENST00000514572 RTL8BQ17RB0 113 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 VMA21Q3ZAQ7 101 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 RPL39P5Q59GN2 51 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 C12orf73Q69YU5 71 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 STX12Q86Y82 276 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 CLVS1Q8IUQ0 354 aaPredicted RBP2.21□□□□□ -2.06
RFC1-216ENST00000514572 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.21□□□□□ -2.06
RFC1-216ENST00000514572 SLC39A9Q9NUM3 307 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 UFC1Q9Y3C8 167 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 FAT2Q9NYQ8 4349 aa2.21□□□□□ -2.06
RFC1-216ENST00000514572 APOBP04114 4563 aaKnown RBP2.2□□□□□ -2.06
RFC1-216ENST00000514572 DNAH11Q96DT5 4516 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 MYCBP2O75592 4640 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 TRBV7-1A0A0A6YYK4 115 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 MEIS3P1A6NDR6 274 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 HMSDA8MTL9 139 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 PPP5D1E7EU14 171 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 G3V2T6 193 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 M0R129 80 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 HMGB3O15347 200 aaKnown RBP2.2□□□□□ -2.06
RFC1-216ENST00000514572 CYB5BO43169 146 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 MRPS14O60783 128 aaKnown RBP2.2□□□□□ -2.06
RFC1-216ENST00000514572 ATG12O94817 140 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 HIST1H1BP16401 226 aaKnown RBP2.2□□□□□ -2.06
RFC1-216ENST00000514572 DEFA5Q01523 94 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 HMGN3Q15651 99 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 CCDC58Q4VC31 144 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 GLIPR1L1Q6UWM5 242 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 KRTAP13-1Q8IUC0 172 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 TTC9CQ8N5M4 171 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 CANT1Q8WVQ1 401 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 GINS3Q9BRX5 216 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 FAM107BQ9H098 131 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 TAS2R4Q9NYW5 299 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 APLNQ9ULZ1 77 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 DNAH17Q9UFH2 4485 aa2.2□□□□□ -2.06
RFC1-216ENST00000514572 IBA57-AS1B1ANH7 110 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 M0R2N4 97 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 FABP1P07148 127 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 UBBP0CG47 229 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 APELAP0DMC3 54 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 MIFP14174 115 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 PIGPP57054 158 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 KRTAP13-4Q3LI77 160 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 C1orf134Q5TEV5 83 aa2.19□□□□□ -2.06
RFC1-216ENST00000514572 LCN15Q6UWW0 184 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms