RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 TRBV25-1A0A075B6N4 114 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 IGHV3-64A0A075B6Q5 118 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 F5H697 171 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 IFNA1P01562 189 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 GNG4P50150 75 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 RPS20P60866 119 aaKnown RBP6.06□□□□□ -1.44
TCOF1-212ENST00000513538 SSTP61278 116 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 SPANXN1Q5VSR9 72 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 AKAP14Q86UN6 197 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 RNF185Q96GF1 192 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 LINC01600Q96MT4 127 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 MED9Q9NWA0 146 aa6.06□□□□□ -1.44
TCOF1-212ENST00000513538 M0QY20 66 aa6.05□□□□□ -1.44
TCOF1-212ENST00000513538 TAGLN2P37802 199 aaKnown RBP6.05□□□□□ -1.44
TCOF1-212ENST00000513538 TMEM97Q5BJF2 176 aa6.05□□□□□ -1.44
TCOF1-212ENST00000513538 C15orf56Q8N910 161 aa6.05□□□□□ -1.44
TCOF1-212ENST00000513538 FER1L6-AS1Q8NA97 138 aa6.05□□□□□ -1.44
TCOF1-212ENST00000513538 NUDT10Q8NFP7 164 aa6.05□□□□□ -1.44
TCOF1-212ENST00000513538 OR2D3Q8NGH3 330 aa6.05□□□□□ -1.44
TCOF1-212ENST00000513538 NUDT11Q96G61 164 aa6.05□□□□□ -1.44
TCOF1-212ENST00000513538 RNF213Q63HN8 5207 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 IGHV1-24A0A0C4DH33 117 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 F2Z2F3 143 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 K7EN84 100 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 SMIM17P0DL12 118 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 CACNG7P62955 275 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 PRR3P79522 188 aaKnown RBP6.04□□□□□ -1.44
TCOF1-212ENST00000513538 WDR73Q6P4I2 378 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 OCC1Q8TAD7 63 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 DPH3Q96FX2 82 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 AP1S3Q96PC3 154 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 CNFNQ9BYD5 112 aa6.04□□□□□ -1.44
TCOF1-212ENST00000513538 hCG_2014768A0A024R1R8 64 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 TRAV8-4A0A0B4J246 113 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 XKRY2A2RUG3 117 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 P01737 135 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 CTRLP40313 264 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 KRTAP10-8P60410 259 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 COX6A2Q02221 97 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 SUMO4Q6EEV6 95 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 LYZL1Q6UWQ5 148 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 ALKAL2Q6UX46 152 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 PRSS3P2Q8NHM4 247 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 BIN3Q9NQY0 253 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 AP5S1Q9NUS5 200 aa6.03□□□□□ -1.44
TCOF1-212ENST00000513538 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.02□□□□□ -1.45
TCOF1-212ENST00000513538 A0A0J9YXV3 536 aa6.02□□□□□ -1.45
TCOF1-212ENST00000513538 A0A1B0GUV1 79 aa6.02□□□□□ -1.45
TCOF1-212ENST00000513538 TMEM250H0YL14 139 aa6.02□□□□□ -1.45
TCOF1-212ENST00000513538 NDUFS6O75380 124 aaKnown RBP6.02□□□□□ -1.45
TCOF1-212ENST00000513538 MGPP08493 103 aa6.02□□□□□ -1.45
TCOF1-212ENST00000513538 NTF3P20783 257 aa6.02□□□□□ -1.45
TCOF1-212ENST00000513538 NKX2-5P52952 324 aaPredicted RBP6.02□□□□□ -1.45
TCOF1-212ENST00000513538 BLOC1S1P78537 153 aa6.02□□□□□ -1.45
TCOF1-212ENST00000513538 C7orf33Q8WU49 177 aa6.02□□□□□ -1.45
TCOF1-212ENST00000513538 TMEM243Q9BU79 118 aa6.02□□□□□ -1.45
TCOF1-212ENST00000513538 RNASE7Q9H1E1 156 aaKnown RBP6.02□□□□□ -1.45
TCOF1-212ENST00000513538 IGKV2-24A0A0C4DH68 120 aa6.01□□□□□ -1.45
TCOF1-212ENST00000513538 A0A1B0GVG6 124 aa6.01□□□□□ -1.45
TCOF1-212ENST00000513538 MAJINQ3KP22 176 aa6.01□□□□□ -1.45
TCOF1-212ENST00000513538 HIGD2BQ4VC39 106 aa6.01□□□□□ -1.45
TCOF1-212ENST00000513538 FAM231DQ6ZW35 169 aa6.01□□□□□ -1.45
TCOF1-212ENST00000513538 GTSF1Q8WW33 167 aa6.01□□□□□ -1.45
TCOF1-212ENST00000513538 TPPP3Q9BW30 176 aa6.01□□□□□ -1.45
TCOF1-212ENST00000513538 DPH3P1Q9H4G8 78 aa6.01□□□□□ -1.45
TCOF1-212ENST00000513538 RPP21Q9H633 154 aaKnown RBP6.01□□□□□ -1.45
TCOF1-212ENST00000513538 A0A096LNI7 61 aa6□□□□□ -1.45
TCOF1-212ENST00000513538 GAGE12HA6NDE8 117 aa6□□□□□ -1.45
TCOF1-212ENST00000513538 H7C1H1 209 aa6□□□□□ -1.45
TCOF1-212ENST00000513538 EIF4EBP3O60516 100 aaPredicted RBP6□□□□□ -1.45
TCOF1-212ENST00000513538 GAS8-AS1O95177 125 aa6□□□□□ -1.45
TCOF1-212ENST00000513538 TRGC1P0CF51 173 aa6□□□□□ -1.45
TCOF1-212ENST00000513538 FOXA3P55318 350 aaPredicted RBP6□□□□□ -1.45
TCOF1-212ENST00000513538 RASL11AQ6T310 242 aa6□□□□□ -1.45
TCOF1-212ENST00000513538 NIT2Q9NQR4 276 aa6□□□□□ -1.45
TCOF1-212ENST00000513538 RPS10P46783 165 aaKnown RBP5.99□□□□□ -1.45
TCOF1-212ENST00000513538 STPG4Q8N801 248 aa5.99□□□□□ -1.45
TCOF1-212ENST00000513538 PGLYRP4Q96LB8 373 aa5.99□□□□□ -1.45
TCOF1-212ENST00000513538 FAM210AQ96ND0 272 aa5.99□□□□□ -1.45
TCOF1-212ENST00000513538 GVQW2A0A096LPI5 108 aaPredicted RBP5.98□□□□□ -1.45
TCOF1-212ENST00000513538 IGKV3OR2-268A0A0C4DH90 116 aa5.98□□□□□ -1.45
TCOF1-212ENST00000513538 SRP19P09132 144 aaKnown RBP5.98□□□□□ -1.45
TCOF1-212ENST00000513538 GATD1Q8NB37 220 aa5.98□□□□□ -1.45
TCOF1-212ENST00000513538 GATCO43716 136 aaKnown RBP5.97□□□□□ -1.45
TCOF1-212ENST00000513538 AMTP48728 403 aa5.97□□□□□ -1.45
TCOF1-212ENST00000513538 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
TCOF1-212ENST00000513538 TWIST1Q15672 202 aa5.97□□□□□ -1.45
TCOF1-212ENST00000513538 CT83Q5H943 113 aa5.97□□□□□ -1.45
TCOF1-212ENST00000513538 SPINK6Q6UWN8 80 aa5.97□□□□□ -1.45
TCOF1-212ENST00000513538 LINC01551Q86U37 167 aa5.97□□□□□ -1.45
TCOF1-212ENST00000513538 CHCHD10Q8WYQ3 142 aaPredicted RBP5.97□□□□□ -1.45
TCOF1-212ENST00000513538 UBE2L6O14933 153 aa5.96□□□□□ -1.46
TCOF1-212ENST00000513538 LINC00526Q96FQ7 95 aa5.96□□□□□ -1.46
TCOF1-212ENST00000513538 MRPL18Q9H0U6 180 aaKnown RBP5.96□□□□□ -1.46
TCOF1-212ENST00000513538 TRAV26-2A0A0B4J265 109 aa5.95□□□□□ -1.46
TCOF1-212ENST00000513538 A8MWL6 223 aa5.95□□□□□ -1.46
TCOF1-212ENST00000513538 FOXI1Q12951 378 aa5.95□□□□□ -1.46
TCOF1-212ENST00000513538 COTL1Q14019 142 aa5.95□□□□□ -1.46
TCOF1-212ENST00000513538 CFAP161Q6P656 301 aa5.95□□□□□ -1.46
TCOF1-212ENST00000513538 REG3GQ6UW15 175 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms