RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 LINC00479Q96M42 142 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 ZNF702PQ9H963 129 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 NSD1Q96L73 2696 aaPredicted RBP7.06□□□□□ -1.28
USP53-207ENST00000510852 MAST4O15021 2626 aa7.06□□□□□ -1.28
USP53-207ENST00000510852 BLCAPP62952 87 aa7.06□□□□□ -1.28
USP53-207ENST00000510852 FAM103A1Q9BTL3 118 aaKnown RBP7.06□□□□□ -1.28
USP53-207ENST00000510852 PLXNB1O43157 2135 aa7.06□□□□□ -1.28
USP53-207ENST00000510852 FAM181BA6NEQ2 426 aa7.06□□□□□ -1.28
USP53-207ENST00000510852 DNAJC9-AS1A6NH13 148 aa7.06□□□□□ -1.28
USP53-207ENST00000510852 NUPR1O60356 82 aa7.06□□□□□ -1.28
USP53-207ENST00000510852 APELAP0DMC3 54 aa7.06□□□□□ -1.28
USP53-207ENST00000510852 POM121L12Q8N7R1 296 aa7.06□□□□□ -1.28
USP53-207ENST00000510852 PSENENQ9NZ42 101 aa7.06□□□□□ -1.28
USP53-207ENST00000510852 FN1P02751 2386 aaKnown RBP7.05□□□□□ -1.28
USP53-207ENST00000510852 ZFP92A6NM28 416 aa7.05□□□□□ -1.28
USP53-207ENST00000510852 LINC01548A6NM66 108 aa7.05□□□□□ -1.28
USP53-207ENST00000510852 IGKCP01834 107 aa7.05□□□□□ -1.28
USP53-207ENST00000510852 WT1-ASQ06250 92 aa7.05□□□□□ -1.28
USP53-207ENST00000510852 NKAPP1Q8N9T2 125 aa7.05□□□□□ -1.28
USP53-207ENST00000510852 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
USP53-207ENST00000510852 TET2Q6N021 2002 aaPredicted RBP7.05□□□□□ -1.28
USP53-207ENST00000510852 SPANXN5Q5MJ07 72 aa7.05□□□□□ -1.28
USP53-207ENST00000510852 HIST1H4GQ99525 98 aa7.05□□□□□ -1.28
USP53-207ENST00000510852 SDF2L1Q9HCN8 221 aa7.05□□□□□ -1.28
USP53-207ENST00000510852 IGHV4-30-4P0DP06 118 aa7.04□□□□□ -1.28
USP53-207ENST00000510852 ERHP84090 104 aaKnown RBP7.04□□□□□ -1.28
USP53-207ENST00000510852 NFE4Q86UQ8 179 aa7.04□□□□□ -1.28
USP53-207ENST00000510852 SBSPONQ8IVN8 264 aa7.04□□□□□ -1.28
USP53-207ENST00000510852 AMN1Q8IY45 258 aa7.04□□□□□ -1.28
USP53-207ENST00000510852 C17orf112F2Z3M2 114 aa7.03□□□□□ -1.28
USP53-207ENST00000510852 SCGB1C2P0DMR2 95 aa7.03□□□□□ -1.28
USP53-207ENST00000510852 CHAC1Q9BUX1 264 aa7.03□□□□□ -1.28
USP53-207ENST00000510852 IGHV3OR16-12A0A075B7B8 117 aa7.03□□□□□ -1.28
USP53-207ENST00000510852 IGLL1P15814 213 aa7.03□□□□□ -1.28
USP53-207ENST00000510852 TMEM252Q8N6L7 170 aa7.03□□□□□ -1.28
USP53-207ENST00000510852 ZNF492Q9P255 531 aa7.03□□□□□ -1.28
USP53-207ENST00000510852 RNASE1P07998 156 aaKnown RBP7.02□□□□□ -1.28
USP53-207ENST00000510852 RNASE2P10153 161 aaKnown RBP7.02□□□□□ -1.28
USP53-207ENST00000510852 UBE2BP63146 152 aa7.02□□□□□ -1.28
USP53-207ENST00000510852 ODF3L2Q3SX64 289 aa7.02□□□□□ -1.28
USP53-207ENST00000510852 G3V318 75 aa7.02□□□□□ -1.29
USP53-207ENST00000510852 C2orf83Q53S99 150 aa7.02□□□□□ -1.29
USP53-207ENST00000510852 DKK2Q9UBU2 259 aa7.02□□□□□ -1.29
USP53-207ENST00000510852 CRIP2P52943 208 aaPredicted RBP7.01□□□□□ -1.29
USP53-207ENST00000510852 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
USP53-207ENST00000510852 GTSF1Q8WW33 167 aa7.01□□□□□ -1.29
USP53-207ENST00000510852 C11orf52Q96A22 123 aa7.01□□□□□ -1.29
USP53-207ENST00000510852 NF1P21359 2839 aa7.01□□□□□ -1.29
USP53-207ENST00000510852 PMS2P5A8MQ11 134 aa7.01□□□□□ -1.29
USP53-207ENST00000510852 NIPBLQ6KC79 2804 aaeCLIP7□□□□□ -1.29
USP53-207ENST00000510852 IGLV2-8P01709 118 aa7□□□□□ -1.29
USP53-207ENST00000510852 PRH1P02810 166 aa7□□□□□ -1.29
USP53-207ENST00000510852 DEFA4P12838 97 aa7□□□□□ -1.29
USP53-207ENST00000510852 TEP1Q99973 2627 aaKnown RBP7□□□□□ -1.29
USP53-207ENST00000510852 TIMM17BO60830 172 aa7□□□□□ -1.29
USP53-207ENST00000510852 HBDP02042 147 aa7□□□□□ -1.29
USP53-207ENST00000510852 REG3GQ6UW15 175 aa7□□□□□ -1.29
USP53-207ENST00000510852 TMEM256Q8N2U0 113 aa7□□□□□ -1.29
USP53-207ENST00000510852 KRTDAPP60985 99 aa6.99□□□□□ -1.29
USP53-207ENST00000510852 MRPS36P82909 103 aaKnown RBP6.99□□□□□ -1.29
USP53-207ENST00000510852 CEND1Q8N111 149 aa6.99□□□□□ -1.29
USP53-207ENST00000510852 OPRPNQ99935 248 aaPredicted RBP6.99□□□□□ -1.29
USP53-207ENST00000510852 CYTL1Q9NRR1 136 aa6.99□□□□□ -1.29
USP53-207ENST00000510852 ZNF580Q9UK33 172 aa6.99□□□□□ -1.29
USP53-207ENST00000510852 SRP19P09132 144 aaKnown RBP6.99□□□□□ -1.29
USP53-207ENST00000510852 ZNF876PQ49A33 203 aa6.99□□□□□ -1.29
USP53-207ENST00000510852 TMEM61Q8N0U2 210 aa6.99□□□□□ -1.29
USP53-207ENST00000510852 C15orf53Q8NAA6 179 aa6.99□□□□□ -1.29
USP53-207ENST00000510852 MYOZ3Q8TDC0 251 aa6.99□□□□□ -1.29
USP53-207ENST00000510852 IGLV11-55A0A075B6I3 123 aa6.98□□□□□ -1.29
USP53-207ENST00000510852 Q9H3A6 140 aa6.98□□□□□ -1.29
USP53-207ENST00000510852 ZNF355PQ9NSJ1 428 aa6.98□□□□□ -1.29
USP53-207ENST00000510852 IGHV3-21A0A0B4J1V1 117 aa6.98□□□□□ -1.29
USP53-207ENST00000510852 SYNJ2BPP57105 145 aa6.98□□□□□ -1.29
USP53-207ENST00000510852 UPK3BQ9BT76 320 aa6.98□□□□□ -1.29
USP53-207ENST00000510852 SCRT1Q9BWW7 348 aa6.98□□□□□ -1.29
USP53-207ENST00000510852 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
USP53-207ENST00000510852 I3L2K1 104 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 IGHV3-48P01763 117 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 RNASE4P34096 147 aaKnown RBP6.97□□□□□ -1.29
USP53-207ENST00000510852 KLK9Q2XQG4 91 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 C7orf65Q6ZTY9 151 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 TVP23CQ96ET8 276 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 KLK9Q9UKQ9 250 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 IGHV1OR15-1A0A075B7D0 117 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 K7EIM0 57 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 TSHBP01222 138 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 LTAP01374 205 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 IGLV1-40P01703 118 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 RPL7L1Q6DKI1 246 aaKnown RBP6.97□□□□□ -1.29
USP53-207ENST00000510852 C10orf99Q6UWK7 81 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 URB1-AS1Q96HZ7 61 aa6.97□□□□□ -1.29
USP53-207ENST00000510852 UBE2L5PA0A1B0GUS4 154 aa6.96□□□□□ -1.3
USP53-207ENST00000510852 H3BUA1 57 aa6.96□□□□□ -1.3
USP53-207ENST00000510852 DIRC1Q969H9 104 aa6.96□□□□□ -1.3
USP53-207ENST00000510852 NPCDR1Q9BY65 106 aa6.96□□□□□ -1.3
USP53-207ENST00000510852 KLK15Q9H2R5 256 aa6.96□□□□□ -1.3
USP53-207ENST00000510852 IL36BQ9NZH7 164 aa6.96□□□□□ -1.3
USP53-207ENST00000510852 MRPL36Q9P0J6 103 aaKnown RBP6.96□□□□□ -1.3
USP53-207ENST00000510852 ATOX1O00244 68 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms