RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 NSD1Q96L73 2696 aaPredicted RBP5.61□□□□□ -1.51
SSBP2-213ENST00000509743 IGLV4-69A0A075B6H9 119 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 IGKV2D-26A0A0A0MRZ7 120 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 CYSRT1A8MQ03 144 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 E9PLD3 99 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 MTORP42345 2549 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 UBE2D3P61077 147 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 UBE2D2P62837 147 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 SEC11AP67812 179 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 KRTAP24-1Q3LI83 254 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 MPV17L2Q567V2 206 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 BVES-AS1Q5T3Y7 98 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 SHISA2Q6UWI4 295 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 PCP2Q8IVA1 136 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 SLC25A29Q8N8R3 303 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 ZNRF2Q8NHG8 242 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 SPATA3Q8NHX4 192 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 DEFB104AQ8WTQ1 72 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 CHCHD7Q9BUK0 85 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 VCX2Q9H322 139 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 ZMAT5Q9UDW3 170 aaKnown RBP5.61□□□□□ -1.51
SSBP2-213ENST00000509743 TP73-AS1Q9UF72 201 aa5.61□□□□□ -1.51
SSBP2-213ENST00000509743 NOTCH2Q04721 2471 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 NF1P21359 2839 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 HIVEP1P15822 2718 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 FLNBO75369 2602 aaKnown RBP5.6□□□□□ -1.51
SSBP2-213ENST00000509743 TRGV4A0A0C4DH28 118 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 LYRM9A8MSI8 78 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 MRPS36P82909 103 aaKnown RBP5.6□□□□□ -1.51
SSBP2-213ENST00000509743 AMELXQ99217 191 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 PRADC1Q9BSG0 188 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 CHAC1Q9BUX1 264 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 UBE2D4Q9Y2X8 147 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 X6R8D5 127 aa5.6□□□□□ -1.51
SSBP2-213ENST00000509743 TRAV8-6A0A0B4J262 113 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 GAGE12JA6NER3 117 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 TCTAP57738 103 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 GAGE1Q13065 139 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 GAGE4Q13068 117 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 GAGE5Q13069 117 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 TAL2Q16559 108 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 GAGE13Q4V321 117 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 C3orf56Q8N813 242 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 PHLDA1Q8WV24 401 aaPredicted RBP5.59□□□□□ -1.51
SSBP2-213ENST00000509743 GTSF1LQ9H1H1 148 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 Q9UF83 564 aa5.59□□□□□ -1.51
SSBP2-213ENST00000509743 ANK3Q12955 4377 aaKnown RBP5.58□□□□□ -1.52
SSBP2-213ENST00000509743 TRBV25-1A0A075B6N4 114 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.58□□□□□ -1.52
SSBP2-213ENST00000509743 IGHV3-38A0A0C4DH36 116 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 MYMXA0A1B0GTQ4 84 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 IGKV2-29A2NJV5 120 aaPredicted RBP5.58□□□□□ -1.52
SSBP2-213ENST00000509743 A6NDN8 102 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 H7C423 109 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 MIFP14174 115 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 EMP1P54849 157 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 FHL2Q14192 279 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 TMEM170BQ5T4T1 132 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 ORAOV1Q8WV07 137 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 OPRPNQ99935 248 aaPredicted RBP5.58□□□□□ -1.52
SSBP2-213ENST00000509743 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
SSBP2-213ENST00000509743 FN1P02751 2386 aaKnown RBP5.58□□□□□ -1.52
SSBP2-213ENST00000509743 MAST4O15021 2626 aa5.58□□□□□ -1.52
SSBP2-213ENST00000509743 MUC4Q99102 2169 aa5.57□□□□□ -1.52
SSBP2-213ENST00000509743 TINCRA0A1B0GVN0 87 aa5.57□□□□□ -1.52
SSBP2-213ENST00000509743 LEPROTO15243 131 aa5.57□□□□□ -1.52
SSBP2-213ENST00000509743 LINC00694P0DN24 101 aa5.57□□□□□ -1.52
SSBP2-213ENST00000509743 IGHV4-30-4P0DP06 118 aa5.57□□□□□ -1.52
SSBP2-213ENST00000509743 DEFB135Q30KP9 77 aa5.57□□□□□ -1.52
SSBP2-213ENST00000509743 DGAT2L7PQ6IED9 249 aa5.57□□□□□ -1.52
SSBP2-213ENST00000509743 PLEKHB2Q96CS7 222 aa5.57□□□□□ -1.52
SSBP2-213ENST00000509743 TMEM243Q9BU79 118 aa5.57□□□□□ -1.52
SSBP2-213ENST00000509743 IGHV4-28A0A0C4DH34 117 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 A0A0J9YXV3 536 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 TEX48A0A1B0GUV7 120 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 TMEM223A0PJW6 202 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 ZNF815PA8K554 130 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 A8MZ25 164 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 UBE2L6O14933 153 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 DEFB130BP0DP73 79 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 DEFB130AP0DP74 79 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 ZNF22P17026 224 aaPredicted RBP5.56□□□□□ -1.52
SSBP2-213ENST00000509743 ZNF25P17030 456 aaPredicted RBP5.56□□□□□ -1.52
SSBP2-213ENST00000509743 EGFEM1PQ0D2K5 195 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 Q6ZUT4 128 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 SBSPONQ8IVN8 264 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 MAPKAPK5-AS1Q8N8E1 139 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 FAM104AQ969W3 186 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 RNF183Q96D59 192 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 TTTY13Q9BZ97 58 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 COX11Q9Y6N1 276 aa5.56□□□□□ -1.52
SSBP2-213ENST00000509743 ZNF469Q96JG9 3925 aaPredicted RBP5.55□□□□□ -1.52
SSBP2-213ENST00000509743 NBPF19A0A087WUL8 3843 aa5.55□□□□□ -1.52
SSBP2-213ENST00000509743 J3QQQ9 107 aa5.55□□□□□ -1.52
SSBP2-213ENST00000509743 LGALS3P17931 250 aaKnown RBP5.55□□□□□ -1.52
SSBP2-213ENST00000509743 FAM222AQ5U5X8 452 aa5.55□□□□□ -1.52
SSBP2-213ENST00000509743 AMMECR1LQ6DCA0 310 aa5.55□□□□□ -1.52
SSBP2-213ENST00000509743 CEMP1Q6PRD7 247 aaPredicted RBP5.55□□□□□ -1.52
SSBP2-213ENST00000509743 SCGB1D4Q6XE38 83 aa5.55□□□□□ -1.52
SSBP2-213ENST00000509743 NTM-AS1Q6ZSK4 140 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms