RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 KCNRGQ8N5I3 272 aa2.49□□□□□ -2.01
HMGN1P11-201ENST00000508668 FAM213BQ8TBF2 198 aa2.49□□□□□ -2.01
HMGN1P11-201ENST00000508668 SFRP2Q96HF1 295 aa2.49□□□□□ -2.01
HMGN1P11-201ENST00000508668 TMEM101Q96IK0 257 aa2.49□□□□□ -2.01
HMGN1P11-201ENST00000508668 BTF3L4Q96K17 158 aa2.49□□□□□ -2.01
HMGN1P11-201ENST00000508668 LINC00479Q96M42 142 aa2.49□□□□□ -2.01
HMGN1P11-201ENST00000508668 DERL1Q9BUN8 251 aa2.49□□□□□ -2.01
HMGN1P11-201ENST00000508668 HERC2O95714 4834 aa2.49□□□□□ -2.01
HMGN1P11-201ENST00000508668 FRAS1Q86XX4 4008 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 IGHV3-64A0A075B6Q5 118 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 TRBV6-8A0A0A6YYG3 113 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 TRAV8-4A0A0B4J246 113 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 LRCOL1A6NCL2 159 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 FAM74A7A6NL05 159 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 KRBOX1C9JBD0 128 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 IGLV2-8P01709 118 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 P01737 135 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 GZMBP10144 247 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 RNASE3P12724 160 aaKnown RBP2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 FHITP49789 147 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 GNG4P50150 75 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 ZNF80P51504 273 aaPredicted RBP2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 CACNG7P62955 275 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 RPL7L1Q6DKI1 246 aaKnown RBP2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 DPPA3Q6W0C5 159 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 C14orf178Q8N769 122 aaPredicted RBP2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 TVP23CQ96ET8 276 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 DNAJC30Q96LL9 226 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 CHAC1Q9BUX1 264 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 SAMD10Q9BYL1 202 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 WFDC1Q9HC57 220 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 PYGO1Q9Y3Y4 419 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 KMT2AQ03164 3969 aa2.48□□□□□ -2.01
HMGN1P11-201ENST00000508668 IGKV3D-20A0A0C4DH25 116 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 IGKV3OR2-268A0A0C4DH90 116 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 RNF222A6NCQ9 220 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 F2Z2F3 143 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 OXTP01178 125 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 RAB5CP51148 216 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 UBE2D3P61077 147 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 UBE2D2P62837 147 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 RPL19P84098 196 aaKnown RBP2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 COTL1Q14019 142 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 RNASEKQ6P5S7 137 aaKnown RBP2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 CLPSL2Q6UWE3 100 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 TEX261Q6UWH6 196 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 TMUB2Q71RG4 321 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 SCXQ7RTU7 201 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 LINC00269Q8N2A0 174 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 FER1L6-AS1Q8NA97 138 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 OR2D3Q8NGH3 330 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 SUN5Q8TC36 379 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 GTSF1Q8WW33 167 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 TMEM243Q9BU79 118 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 JPT2Q9H910 190 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 MANBALQ9NQG1 85 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 MED9Q9NWA0 146 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 GNG13Q9P2W3 67 aa2.47□□□□□ -2.01
HMGN1P11-201ENST00000508668 DNAH10Q8IVF4 4471 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 IGLV10-54A0A075B6I4 117 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 A0A087X002 238 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 MUC21A0A0G2JKD1 596 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 TRBV6-1A0A0K0K1D8 114 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 MUC21A0A140T8X8 626 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 PDE6DO43924 150 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 LTAP01374 205 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 TAGLN2P37802 199 aaKnown RBP2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 REG3AQ06141 175 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 ZNF674Q2M3X9 581 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 LINC01620Q4KN68 170 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 MPV17L2Q567V2 206 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 DNLZQ5SXM8 178 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 ADAMTSL4-AS1Q5T5F5 129 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 RASL11AQ6T310 242 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 ATRAIDQ6UW56 229 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 OR10G8Q8NGN5 311 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 ISOC2Q96AB3 205 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 LINC00474Q9P2X8 69 aa2.46□□□□□ -2.02
HMGN1P11-201ENST00000508668 SRRM2Q9UQ35 2752 aaKnown RBP2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 BCL2L11O43521 198 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 APCSP02743 223 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 CXCL1P09341 107 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 OR5AL1P0C617 328 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 PMCHP20382 165 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 FCER1GP30273 86 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 RPL35P42766 123 aaKnown RBP2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 NKX2-5P52952 324 aaPredicted RBP2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 CEBPGP53567 150 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 RBX1P62877 108 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 ZNF345Q14585 488 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 SS18Q15532 418 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 CENPWQ5EE01 88 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 REG3GQ6UW15 175 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 OR10AG1Q8NH19 301 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 CIRBP-AS1Q8TBR5 109 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 SMIM12Q96EX1 92 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 RNF185Q96GF1 192 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 NIT2Q9NQR4 276 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 VPS13DQ5THJ4 4388 aa2.45□□□□□ -2.02
HMGN1P11-201ENST00000508668 IGKV2-24A0A0C4DH68 120 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms