RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 KCPQ6ZWJ8 1503 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 LMTK2Q8IWU2 1503 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 DUOX2Q9NRD8 1548 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 TRBV6-8A0A0A6YYG3 113 aa2.36□□□□□ -2.03
SMARCA5-202ENST00000508573 C10orf142B7Z368 130 aa2.36□□□□□ -2.03
SMARCA5-202ENST00000508573 BCE1O60756 84 aa2.36□□□□□ -2.03
SMARCA5-202ENST00000508573 GNGT1P63211 74 aa2.36□□□□□ -2.03
SMARCA5-202ENST00000508573 NUMA1Q14980 2115 aa2.36□□□□□ -2.03
SMARCA5-202ENST00000508573 HMGXB3Q12766 1538 aa2.36□□□□□ -2.03
SMARCA5-202ENST00000508573 MICAL3Q7RTP6 2002 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 A0A0J9YY99 117 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 LINC00643Q86TS7 51 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 CDC42SE2Q9NRR3 84 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 NDUFA4L2Q9NRX3 87 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 EFCAB5A4FU69 1503 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 NEXMIFQ5QGS0 1516 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 KDM3BQ7LBC6 1761 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 SCN11AQ9UI33 1791 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 PLXNA1Q9UIW2 1896 aa2.35□□□□□ -2.03
SMARCA5-202ENST00000508573 KIF21AQ7Z4S6 1674 aa2.34□□□□□ -2.03
SMARCA5-202ENST00000508573 MPDZO75970 2070 aa2.34□□□□□ -2.03
SMARCA5-202ENST00000508573 TRBV25-1A0A075B6N4 114 aa2.34□□□□□ -2.03
SMARCA5-202ENST00000508573 IGKV2D-24A0A075B6R9 120 aa2.34□□□□□ -2.03
SMARCA5-202ENST00000508573 C7orf77A4D0Y5 90 aa2.34□□□□□ -2.03
SMARCA5-202ENST00000508573 COX6CP09669 75 aa2.34□□□□□ -2.03
SMARCA5-202ENST00000508573 CYYR1Q96J86 154 aa2.34□□□□□ -2.03
SMARCA5-202ENST00000508573 ATRXP46100 2492 aa2.34□□□□□ -2.04
SMARCA5-202ENST00000508573 PREX2Q70Z35 1606 aa2.34□□□□□ -2.04
SMARCA5-202ENST00000508573 ZNF142P52746 1687 aaPredicted RBP2.34□□□□□ -2.04
SMARCA5-202ENST00000508573 CTTNBP2Q8WZ74 1663 aa2.34□□□□□ -2.04
SMARCA5-202ENST00000508573 IQSEC2Q5JU85 1478 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 LRRC9Q6ZRR7 1453 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 SEC16AO15027 2179 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 RP1P56715 2156 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 DIP2CQ9Y2E4 1556 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 TRBV6-7A0A0A0MS04 114 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 LRCOL1A6NCL2 159 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 TMEM14DPA8MWL7 114 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 IGLV3-1P01715 115 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 ACYP1P07311 99 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 ZNF56Q15929 161 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 TMEM170BQ5T4T1 132 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 C4orf3Q8WVX3 66 aa2.33□□□□□ -2.04
SMARCA5-202ENST00000508573 EXPH5Q8NEV8 1989 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 ARHGEF5Q12774 1597 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 NINQ8N4C6 2090 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 MYOFQ9NZM1 2061 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 RGPD2P0DJD1 1756 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 TRBV6-4A0A1B0GX49 114 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 UMAD1C9J7I0 102 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 F8WEM9 126 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 HMGN4O00479 90 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 SMIM11AP58511 58 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 DYNLRB1Q9NP97 96 aa2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 ZFHX2Q9C0A1 2572 aaPredicted RBP2.32□□□□□ -2.04
SMARCA5-202ENST00000508573 CR1P17927 2039 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 A0A087WWC5 75 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 PPYP01298 95 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 IGHV3-30P01768 117 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 SMIM13P0DJ93 91 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 IGHV3-30-5P0DP03 117 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 C20orf197Q8N268 126 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 HEATR1Q9H583 2144 aaKnown RBP2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 KIAA0100Q14667 2235 aaKnown RBP2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 EHBP1L1Q8N3D4 1523 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 COL5A3P25940 1745 aaPredicted RBP2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 ARFGEF2Q9Y6D5 1785 aa2.31□□□□□ -2.04
SMARCA5-202ENST00000508573 LOC101927531A0A1B0GV80 90 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 A0A1W2PNN7 141 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 FAM223BA6NKX1 122 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 IQCF6A8MYZ5 107 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 HMGN2P05204 90 aaKnown RBP2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 RNASE3P12724 160 aaKnown RBP2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 PDE6GP18545 87 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 ELOF1P60002 83 aaKnown RBP2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 TMEM14BQ9NUH8 114 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 PSENENQ9NZ42 101 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 LENEPQ9Y5L5 61 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 RAPGEF6Q8TEU7 1601 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 ITSN1Q15811 1721 aa2.3□□□□□ -2.04
SMARCA5-202ENST00000508573 DLG5Q8TDM6 1919 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 RGPD8O14715 1765 aaPredicted RBP2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 RGPD5Q99666 1765 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 COL4A2P08572 1712 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 MYOM1P52179 1685 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 CCDC180Q9P1Z9 1646 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 JMJD7-PLA2G4BH0Y9G9 81 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 IGKV1-17P01599 117 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 KRTAP13-2Q52LG2 175 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 PSMG4Q5JS54 123 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 XAF1Q6GPH4 301 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 ANAPC11Q9NYG5 84 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 ZGRF1Q86YA3 2104 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 MED12LQ86YW9 2145 aa2.29□□□□□ -2.04
SMARCA5-202ENST00000508573 NRXN2Q9P2S2 1712 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 KIF1AQ12756 1690 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 MRC1P22897 1456 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 IGKV3D-7A0A0C4DH55 119 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 IGKV3OR2-268A0A0C4DH90 116 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms