RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 LOC100130705A0A1B0GUX0 176 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 CEBPZOSA8MTT3 80 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 M0R2P5 195 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 SYNGR2O43760 224 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 CRPP02741 224 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 GPX1P07203 203 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 INPP1P49441 399 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 MIAQ16674 131 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 LCN15Q6UWW0 184 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 LINC00269Q8N2A0 174 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 LRRC20Q8TCA0 184 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 SSR3Q9UNL2 185 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 HIGD1AQ9Y241 93 aa1.47□□□□□ -2.17
TOPBP1-206ENST00000508524 A0A087WWC5 75 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 PGPA6NDG6 321 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 H3BQ85 93 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 TYMSP04818 313 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 OR5G3P0C626 314 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 CXCL2P19875 107 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 SURF2Q15527 256 aaPredicted RBP1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 C9orf116Q5BN46 136 aaPredicted RBP1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 IZUMO2Q6UXV1 221 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 AHSA2Q719I0 299 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 EXOC3-AS1Q8N2X6 119 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 RNASE11Q8TAA1 199 aaKnown RBP1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 GLYATL2Q8WU03 294 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 PDCD10Q9BUL8 212 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 NAA50Q9GZZ1 169 aaKnown RBP1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 FKBP14Q9NWM8 211 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 NAGKQ9UJ70 344 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 AP4S1Q9Y587 144 aa1.46□□□□□ -2.18
TOPBP1-206ENST00000508524 TRBV6-8A0A0A6YYG3 113 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 C3orf85A0A1B0GTC6 90 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 A0A1W2PNM2 257 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 TMEM262E9PQX1 116 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 MYL12BO14950 172 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 PSPHP1O15172 72 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 HYPMO75409 117 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 MGST1P10620 155 aaKnown RBP1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 IAPPP10997 89 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 PIGPP57054 158 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 ELOBQ15370 118 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 Q6AWC8 147 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 LPCAT3Q6P1A2 487 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 CYP2G1PQ6ZSU1 146 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 SELENOHQ8IZQ5 122 aaKnown RBP1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 LINC00337Q8N6G1 96 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 OR1S1Q8NH92 325 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 DTD1Q8TEA8 209 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 GPX8Q8TED1 209 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 RAB2BQ8WUD1 216 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 PYDC1Q8WXC3 89 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 C20orf166-AS1Q96NR2 134 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 SRRQ9GZT4 340 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 ARL6Q9H0F7 186 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 ARV1Q9H2C2 271 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 SND1-IT1Q9HBX3 110 aa1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.45□□□□□ -2.18
TOPBP1-206ENST00000508524 TRBV19A0A075B6N1 114 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 GVQW2A0A096LPI5 108 aaPredicted RBP1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 TRAV1-2A0A0B4J238 106 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 F6UZH7 168 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 GABARAPH6UMI1 98 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 ARL6IP5O75915 188 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 TNFAIP8O95379 198 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 CDS2O95674 445 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 PTTG1O95997 202 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 IL5P05113 134 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 FABP1P07148 127 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 NMBP08949 121 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 SEC11BP0C7V7 166 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 PYYP10082 97 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 BCL2P10415 239 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 RNASE3P12724 160 aaKnown RBP1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 BCAP31P51572 246 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 UBE2D3P61077 147 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 RAB11AP62491 216 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 UBE2D2P62837 147 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 EIF5AP63241 154 aaKnown RBP1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 SLC38A11Q08AI6 406 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 RAB31Q13636 194 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 LINC00305Q7Z4B0 112 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 CYGBQ8WWM9 190 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 BORCS5Q969J3 196 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 KRTAP2-1Q9BYU5 128 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 CHTOPQ9Y3Y2 248 aaKnown RBP1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 PXMP4Q9Y6I8 212 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 U3KQ87 197 aa1.44□□□□□ -2.18
TOPBP1-206ENST00000508524 IRGMA1A4Y4 181 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 H3BP45 60 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 GYG2O15488 501 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 CFDP00746 253 aaPredicted RBP1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 ZNF80P51504 273 aaPredicted RBP1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 AKR1C1Q04828 323 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 COX6B2Q6YFQ2 88 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 LHFPL1Q86WI0 220 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 BPIFA4PQ86YQ2 179 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 OR13C8Q8NGS7 320 aa1.43□□□□□ -2.18
TOPBP1-206ENST00000508524 TSKUQ8WUA8 353 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms