RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LINC00473A8K010 186 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 TRACP01848 142 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 MGST2Q99735 147 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 NOTCH1P46531 2555 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 MIFP14174 115 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 SPAG11BQ08648 103 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 BEAN1Q3B7T3 259 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 Q6ZS46 218 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 CBLN2Q8IUK8 224 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 VSIG2Q96IQ7 327 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 TRAV4A0A0B4J268 109 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 PROP1O75360 226 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 PSMB8P28062 276 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 ASB16-AS1Q495Z4 193 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 TMEM141Q96I45 108 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 TRAV12-1A0A0B4J245 112 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV1-6A0A0C4DH72 117 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 K7ERS5 55 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 LGALS9O00182 355 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 LTAP01374 205 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 MLANAQ16655 118 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 K7EQD1 137 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 CHCHD1Q96BP2 118 aaKnown RBP2.23□□□□□ -2.05
NEDD4-208ENST00000508342 GNB1LQ9BYB4 327 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 A0A0A0MQY5 61 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 C9JQL5 133 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 FNDC10F2Z333 226 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 PRYO14603 147 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 DEFB114Q30KQ6 69 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 NMSQ5H8A3 153 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 FAM222AQ5U5X8 452 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 C1orf229Q6ZS94 237 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-208ENST00000508342 SBSPONQ8IVN8 264 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 AMN1Q8IY45 258 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 SLC25A29Q8N8R3 303 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 C14orf132Q9NPU4 83 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 BAHCC1Q9P281 2608 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 TRBV7-3A0A075B6L6 115 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 TRBV6-6A0A0A6YYG2 114 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 TINCRA0A1B0GVN0 87 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV4-1P06312 121 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 ATP5EP56381 51 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-208ENST00000508342 UBE2D2P62837 147 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 FHL3Q13643 280 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 KRTAP1-3Q8IUG1 177 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 TMEM61Q8N0U2 210 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 LINC00337Q8N6G1 96 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 WI2-2373I1.2A0A1W2PRP0 233 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 C2orf66Q6UXQ4 117 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 TMEM263Q8WUH6 116 aaKnown RBP2.23□□□□□ -2.05
NEDD4-208ENST00000508342 ZNF492Q9P255 531 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 FAM231BA6NCW3 169 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 CYSRT1A8MQ03 144 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 LCE2BO14633 110 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 XGP55808 180 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 NDUFA4L2Q9NRX3 87 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 PLA2G2EQ9NZK7 142 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 C16orf90A8MZG2 172 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 SMKR1H3BMG3 65 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 RTBDNQ9BSG5 229 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-208ENST00000508342 LENEPQ9Y5L5 61 aa2.23□□□□□ -2.05
NEDD4-208ENST00000508342 J3QRE1 110 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 PLA2G10O15496 165 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 MP68P56378 58 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 RNASE13Q5GAN3 156 aaKnown RBP2.22□□□□□ -2.05
NEDD4-208ENST00000508342 ZC2HC1BQ5TFG8 222 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 VSIRQ9H7M9 311 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 FAM240AA0A1B0GVK7 77 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 K7EMT4 169 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 KRTAP10-11P60412 298 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 TMEM258P61165 79 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 CEMP1Q6PRD7 247 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-208ENST00000508342 TRBV7-6A0A0J9YX20 115 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV2-29A2NJV5 120 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-208ENST00000508342 CXCL5P42830 114 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 HIGD2BQ4VC39 106 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 WFDC10AQ9H1F0 79 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 SS18L2Q9UHA2 77 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 PROK1P58294 105 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 QRFPP83859 136 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 KRTAP21-3Q3LHN1 58 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 TDRG1Q3Y452 100 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 BVES-AS1Q5T3Y7 98 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 PCP2Q8IVA1 136 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 TMEM75Q8N9X5 138 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 OPRPNQ99935 248 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-208ENST00000508342 FGF23Q9GZV9 251 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-208ENST00000508342 LINC00474Q9P2X8 69 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 RSPO1Q2MKA7 263 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-208ENST00000508342 SPINK6Q6UWN8 80 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 FAM19A1Q7Z5A9 133 aa2.22□□□□□ -2.05
NEDD4-208ENST00000508342 ZNF706Q9Y5V0 76 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV1D-37A0A075B6S9 117 aa2.21□□□□□ -2.05
NEDD4-208ENST00000508342 A0A0G2JRQ6 117 aa2.21□□□□□ -2.05
NEDD4-208ENST00000508342 H3BQ85 93 aa2.21□□□□□ -2.05
NEDD4-208ENST00000508342 LECT2O14960 151 aa2.21□□□□□ -2.05
NEDD4-208ENST00000508342 GNRH2O43555 120 aa2.21□□□□□ -2.05
NEDD4-208ENST00000508342 NREPQ16612 68 aa2.21□□□□□ -2.05
NEDD4-208ENST00000508342 SPINK8P0C7L1 97 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms