RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 COMMD6Q7Z4G1 85 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 C5orf38Q86SI9 138 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 BAGE3Q86Y29 109 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 AQP10Q96PS8 301 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 CYP4F30PQ9H0H9 118 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 LENEPQ9Y5L5 61 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 IER3IP1Q9Y5U9 82 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 MED13LQ71F56 2210 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 ABCA1O95477 2261 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 NRKQ7Z2Y5 1582 aa0.25□□□□□ -2.37
SMN2-208ENST00000508258 SSSCA1O60232 199 aa0.25□□□□□ -2.37
SMN2-208ENST00000508258 PPP1R17O96001 155 aa0.25□□□□□ -2.37
SMN2-208ENST00000508258 NMBP08949 121 aa0.25□□□□□ -2.37
SMN2-208ENST00000508258 GCHFRP30047 84 aa0.25□□□□□ -2.37
SMN2-208ENST00000508258 GNG4P50150 75 aa0.25□□□□□ -2.37
SMN2-208ENST00000508258 KRTAP21-1Q3LI58 79 aa0.25□□□□□ -2.37
SMN2-208ENST00000508258 C9orf153Q5TBE3 101 aa0.25□□□□□ -2.37
SMN2-208ENST00000508258 TTC9CQ8N5M4 171 aa0.25□□□□□ -2.37
SMN2-208ENST00000508258 DOCK2Q92608 1830 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 MAPKBP1O60336 1514 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 PZPP20742 1482 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 C10orf71Q711Q0 1435 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 F5P12259 2224 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 SNAPC5O75971 98 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 PPP3R1P63098 170 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 AMELXQ99217 191 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 NDUFA4L2Q9NRX3 87 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 LINC00474Q9P2X8 69 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 GNG8Q9UK08 70 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 R4GMQ9 66 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 MYH8P13535 1937 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 MYOM1P52179 1685 aa0.24□□□□□ -2.37
SMN2-208ENST00000508258 TRBV7-3A0A075B6L6 115 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 UBE2L5PA0A1B0GUS4 154 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 M0R135 149 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 SMIM6P0DI80 62 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 UBE2L3P68036 154 aaKnown RBP0.23□□□□□ -2.37
SMN2-208ENST00000508258 SPAG11BQ08648 103 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 CFAP126Q5VTH2 177 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 SPAG11AQ6PDA7 123 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 TSLPQ969D9 159 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 MGST2Q99735 147 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 DPH3P1Q9H4G8 78 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 V9GYH0 126 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 SPHKAPQ2M3C7 1700 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 TET3O43151 1660 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 JMJD1CQ15652 2540 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 ARHGEF5Q12774 1597 aa0.23□□□□□ -2.37
SMN2-208ENST00000508258 ZNF609O15014 1411 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 LRRC37A2A6NM11 1700 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 KIF21AQ7Z4S6 1674 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 HMGN4O00479 90 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 PIN1P1O15428 100 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 S100A1P23297 94 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 ATP5EP56381 51 aaPredicted RBP0.22□□□□□ -2.37
SMN2-208ENST00000508258 MRPS10P82664 201 aaKnown RBP0.22□□□□□ -2.37
SMN2-208ENST00000508258 COX6A2Q02221 97 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 DYNLRB1Q9NP97 96 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 APCP25054 2843 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 ZNF236Q9UL36 1845 aa0.22□□□□□ -2.37
SMN2-208ENST00000508258 LAMC1P11047 1609 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 CC2D2AQ9P2K1 1620 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 FAM24AA6NFZ4 105 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 ZNF815PA8K554 130 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 IFITM1P13164 125 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 WHAMMP3Q1A5X7 153 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 SPINK6Q6UWN8 80 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 UBE2DNLQ8IWF7 75 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 SVBPQ8N300 66 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 MYOZ3Q8TDC0 251 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 LINC00472Q9H8W2 130 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 ARHGAP5Q13017 1502 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 ZFYVE16Q7Z3T8 1539 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 SCAPERQ9BY12 1400 aa0.21□□□□□ -2.38
SMN2-208ENST00000508258 KDM3BQ7LBC6 1761 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 CTXND1A0A1B0GTU2 59 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 IGLC7A0M8Q6 106 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 PHGR1C9JFL3 82 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 S100PP25815 95 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 DCDP81605 110 aaKnown RBP0.2□□□□□ -2.38
SMN2-208ENST00000508258 SSBP3-AS1Q7Z2R9 100 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 SMIM4Q8WVI0 70 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 CGREF1Q99674 301 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 CDC42SE2Q9NRR3 84 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 LINC01558Q9Y6Z2 57 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 LRP6O75581 1613 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 PSME4Q14997 1843 aa0.2□□□□□ -2.38
SMN2-208ENST00000508258 DIP2CQ9Y2E4 1556 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 NAV3Q8IVL0 2385 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 HMGXB3Q12766 1538 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 TOPAZ1Q8N9V7 1692 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 LOC285095A0A1B0GVY8 99 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 C20orf202A1L168 122 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 F8VRH5 84 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 UQCR11O14957 56 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 SPINK8P0C7L1 97 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 HSD52Q0P140 79 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 COX17Q14061 63 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 BAGE2Q86Y30 109 aa0.19□□□□□ -2.38
SMN2-208ENST00000508258 FAM213BQ8TBF2 198 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms